RNA–Protein interactions for RNA: ENST00000485565.6

SPIN1-205, Transcript of spindlin 1, humanhuman

TSL 3

Gene SPIN1, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-205ENST00000485565 MSL1Q68DK7 614 aa24.38■■□□□ 1.49
SPIN1-205ENST00000485565 NLGN2Q8NFZ4 835 aa24.38■■□□□ 1.49
SPIN1-205ENST00000485565 DCAF5Q96JK2 942 aa24.38■■□□□ 1.49
SPIN1-205ENST00000485565 AK7Q96M32 723 aa24.38■■□□□ 1.49
SPIN1-205ENST00000485565 ATG3Q9NT62 314 aa24.38■■□□□ 1.49
SPIN1-205ENST00000485565 HSP90AB1P08238 724 aaKnown RBP24.37■■□□□ 1.49
SPIN1-205ENST00000485565 AMIGO3Q86WK7 504 aa24.37■■□□□ 1.49
SPIN1-205ENST00000485565 LINC00116Q8NCU8 138 aa24.37■■□□□ 1.49
SPIN1-205ENST00000485565 ERVV-2B6SEH9 535 aa24.36■■□□□ 1.49
SPIN1-205ENST00000485565 SMIM5Q71RC9 77 aa24.36■■□□□ 1.49
SPIN1-205ENST00000485565 PELP1Q8IZL8 1130 aaKnown RBP24.36■■□□□ 1.49
SPIN1-205ENST00000485565 FLAD1Q8NFF5 587 aa24.36■■□□□ 1.49
SPIN1-205ENST00000485565 ZNF831Q5JPB2 1677 aa24.36■■□□□ 1.49
SPIN1-205ENST00000485565 COL5A3P25940 1745 aaPredicted RBP24.35■■□□□ 1.49
SPIN1-205ENST00000485565 ITPK1Q13572 414 aa24.35■■□□□ 1.49
SPIN1-205ENST00000485565 C1orf141Q5JVX7 400 aa24.35■■□□□ 1.49
SPIN1-205ENST00000485565 GOLGB1Q14789 3259 aaKnown RBP24.34■■□□□ 1.49
SPIN1-205ENST00000485565 NPC1L1Q9UHC9 1359 aa24.34■■□□□ 1.49
SPIN1-205ENST00000485565 PHF14O94880 888 aa24.34■■□□□ 1.49
SPIN1-205ENST00000485565 ATP6V1AP38606 617 aa24.34■■□□□ 1.49
SPIN1-205ENST00000485565 HMOX1P09601 288 aa24.32■■□□□ 1.48
SPIN1-205ENST00000485565 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.31■■□□□ 1.48
SPIN1-205ENST00000485565 CABP4P57796 275 aa24.31■■□□□ 1.48
SPIN1-205ENST00000485565 COL3A1P02461 1466 aaPredicted RBP24.31■■□□□ 1.48
SPIN1-205ENST00000485565 DIAPH1O60610 1272 aaKnown RBP24.3■■□□□ 1.48
SPIN1-205ENST00000485565 SLC4A9Q96Q91 983 aa24.3■■□□□ 1.48
SPIN1-205ENST00000485565 RBM42Q9BTD8 480 aaKnown RBP24.3■■□□□ 1.48
SPIN1-205ENST00000485565 MYH14Q7Z406 1995 aaKnown RBP24.29■■□□□ 1.48
SPIN1-205ENST00000485565 GNPATO15228 680 aa24.29■■□□□ 1.48
SPIN1-205ENST00000485565 TJP1Q07157 1748 aa24.27■■□□□ 1.48
SPIN1-205ENST00000485565 YBX3P16989 372 aaKnown RBP eCLIP24.27■■□□□ 1.48
SPIN1-205ENST00000485565 SSFA2P28290 1259 aa24.27■■□□□ 1.48
SPIN1-205ENST00000485565 NFATC2IPQ8NCF5 419 aa24.27■■□□□ 1.48
SPIN1-205ENST00000485565 AKAP4Q5JQC9 854 aa24.26■■□□□ 1.47
SPIN1-205ENST00000485565 CD2APQ9Y5K6 639 aa24.26■■□□□ 1.47
SPIN1-205ENST00000485565 ADAMTS7Q9UKP4 1686 aa24.24■■□□□ 1.47
SPIN1-205ENST00000485565 C4AP0C0L4 1744 aa24.24■■□□□ 1.47
SPIN1-205ENST00000485565 GRIN3BO60391 1043 aa24.24■■□□□ 1.47
SPIN1-205ENST00000485565 CICQ96RK0 1608 aaPredicted RBP24.24■■□□□ 1.47
SPIN1-205ENST00000485565 PTCD1O75127 700 aaKnown RBP24.23■■□□□ 1.47
SPIN1-205ENST00000485565 MRC1P22897 1456 aa24.22■■□□□ 1.47
SPIN1-205ENST00000485565 MTHFSDQ2M296 383 aaKnown RBP24.22■■□□□ 1.47
SPIN1-205ENST00000485565 LGR6Q9HBX8 967 aa24.22■■□□□ 1.47
SPIN1-205ENST00000485565 U2SURPO15042 1029 aaKnown RBP24.21■■□□□ 1.47
SPIN1-205ENST00000485565 RTCBQ9Y3I0 505 aaKnown RBP24.2■■□□□ 1.46
SPIN1-205ENST00000485565 CNTNAP4Q9C0A0 1308 aa24.19■■□□□ 1.46
SPIN1-205ENST00000485565 RNMTO43148 476 aaKnown RBP24.19■■□□□ 1.46
SPIN1-205ENST00000485565 SLC52A2Q9HAB3 445 aa24.19■■□□□ 1.46
SPIN1-205ENST00000485565 RC3H1Q5TC82 1133 aaKnown RBP24.18■■□□□ 1.46
SPIN1-205ENST00000485565 UBR2Q8IWV8 1755 aa24.16■■□□□ 1.46
SPIN1-205ENST00000485565 C1QTNF8P60827 252 aa24.16■■□□□ 1.46
SPIN1-205ENST00000485565 TRAPPC3LQ5T215 181 aa24.16■■□□□ 1.46
SPIN1-205ENST00000485565 RPS6KA4O75676 772 aa24.15■■□□□ 1.46
SPIN1-205ENST00000485565 SIPA1L3O60292 1781 aaPredicted RBP24.15■■□□□ 1.46
SPIN1-205ENST00000485565 KIF13BQ9NQT8 1826 aa24.14■■□□□ 1.46
SPIN1-205ENST00000485565 CRKLP46109 303 aaKnown RBP24.14■■□□□ 1.45
SPIN1-205ENST00000485565 SLC39A6Q13433 755 aa24.14■■□□□ 1.45
SPIN1-205ENST00000485565 ARHGEF1Q92888 912 aaKnown RBP24.14■■□□□ 1.45
SPIN1-205ENST00000485565 KCPQ6ZWJ8 1503 aa24.14■■□□□ 1.45
SPIN1-205ENST00000485565 PPP2R1AP30153 589 aa24.13■■□□□ 1.45
SPIN1-205ENST00000485565 CFAP53Q96M91 514 aa24.13■■□□□ 1.45
SPIN1-205ENST00000485565 ADRA2BP18089 450 aa24.12■■□□□ 1.45
SPIN1-205ENST00000485565 GIGYF1O75420 1035 aaPredicted RBP24.11■■□□□ 1.45
SPIN1-205ENST00000485565 MMP10P09238 476 aa24.11■■□□□ 1.45
SPIN1-205ENST00000485565 RFC4P35249 363 aa24.11■■□□□ 1.45
SPIN1-205ENST00000485565 N4BP2Q86UW6 1770 aaPredicted RBP24.11■■□□□ 1.45
SPIN1-205ENST00000485565 KIAA1551Q9HCM1 1747 aa24.1■■□□□ 1.45
SPIN1-205ENST00000485565 DNAJC10Q8IXB1 793 aa24.1■■□□□ 1.45
SPIN1-205ENST00000485565 WWC3Q9ULE0 1092 aa24.1■■□□□ 1.45
SPIN1-205ENST00000485565 GYS1P13807 737 aa24.09■■□□□ 1.45
SPIN1-205ENST00000485565 GAS2L2Q8NHY3 880 aa24.09■■□□□ 1.45
SPIN1-205ENST00000485565 SENP3-EIF4A1A0A087X0R7 540 aa24.08■■□□□ 1.45
SPIN1-205ENST00000485565 INTS5Q6P9B9 1019 aaKnown RBP24.08■■□□□ 1.45
SPIN1-205ENST00000485565 NLGN1Q8N2Q7 840 aa24.08■■□□□ 1.45
SPIN1-205ENST00000485565 GNAT3A8MTJ3 354 aa24.07■■□□□ 1.44
SPIN1-205ENST00000485565 PRKAR2BP31323 418 aa24.07■■□□□ 1.44
SPIN1-205ENST00000485565 RSPH6AQ9H0K4 717 aa24.07■■□□□ 1.44
SPIN1-205ENST00000485565 IL17REQ8NFR9 667 aa24.06■■□□□ 1.44
SPIN1-205ENST00000485565 PHACTR3Q96KR7 559 aa24.06■■□□□ 1.44
SPIN1-205ENST00000485565 SRP68Q9UHB9 627 aaKnown RBP24.06■■□□□ 1.44
SPIN1-205ENST00000485565 ATP10DQ9P241 1426 aa24.05■■□□□ 1.44
SPIN1-205ENST00000485565 CCDC87Q9NVE4 849 aa24.05■■□□□ 1.44
SPIN1-205ENST00000485565 NUDCQ9Y266 331 aa24.05■■□□□ 1.44
SPIN1-205ENST00000485565 U2AF1L5P0DN76 240 aaPredicted RBP24.04■■□□□ 1.44
SPIN1-205ENST00000485565 CYP19A1P11511 503 aaPredicted RBP24.04■■□□□ 1.44
SPIN1-205ENST00000485565 U2AF1Q01081 240 aaKnown RBP eCLIP24.04■■□□□ 1.44
SPIN1-205ENST00000485565 USP42Q9H9J4 1324 aaKnown RBP24.04■■□□□ 1.44
SPIN1-205ENST00000485565 TEFQ10587 303 aa24.03■■□□□ 1.44
SPIN1-205ENST00000485565 BRCA1P38398 1863 aaKnown RBP24.02■■□□□ 1.44
SPIN1-205ENST00000485565 C10orf71Q711Q0 1435 aa24.02■■□□□ 1.44
SPIN1-205ENST00000485565 PXDNLA1KZ92 1463 aa24.02■■□□□ 1.44
SPIN1-205ENST00000485565 ADCY9O60503 1353 aa24.02■■□□□ 1.44
SPIN1-205ENST00000485565 TTC5Q8N0Z6 440 aa24.01■■□□□ 1.43
SPIN1-205ENST00000485565 DLG5Q8TDM6 1919 aa24.01■■□□□ 1.43
SPIN1-205ENST00000485565 SOS1Q07889 1333 aaPredicted RBP24.01■■□□□ 1.43
SPIN1-205ENST00000485565 FKBP8Q14318 412 aa24■■□□□ 1.43
SPIN1-205ENST00000485565 VSIG10Q8N0Z9 540 aa24■■□□□ 1.43
SPIN1-205ENST00000485565 ZBTB1Q9Y2K1 713 aa24■■□□□ 1.43
SPIN1-205ENST00000485565 PARP3Q9Y6F1 533 aa24■■□□□ 1.43
SPIN1-205ENST00000485565 CEMIPQ8WUJ3 1361 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms