RNA–Protein interactions for RNA: ENST00000485399.5

NECAB3-211, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,373 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-211ENST00000485399 DDX54Q8TDD1 881 aaKnown RBP28.47■■■□□ 2.15
NECAB3-211ENST00000485399 DCTN1Q14203 1278 aa28.46■■■□□ 2.15
NECAB3-211ENST00000485399 MCM10Q7L590 875 aa28.46■■■□□ 2.15
NECAB3-211ENST00000485399 VIRMAQ69YN4 1812 aaKnown RBP28.45■■■□□ 2.15
NECAB3-211ENST00000485399 IL16Q14005 1332 aa28.45■■■□□ 2.14
NECAB3-211ENST00000485399 NKX1-1Q15270 411 aaPredicted RBP28.44■■■□□ 2.14
NECAB3-211ENST00000485399 MPRIPQ6WCQ1 1025 aa28.44■■■□□ 2.14
NECAB3-211ENST00000485399 IL17REQ8NFR9 667 aa28.44■■■□□ 2.14
NECAB3-211ENST00000485399 DCAF5Q96JK2 942 aa28.44■■■□□ 2.14
NECAB3-211ENST00000485399 RNMTO43148 476 aaKnown RBP28.43■■■□□ 2.14
NECAB3-211ENST00000485399 THUMPD2Q9BTF0 503 aaKnown RBP28.43■■■□□ 2.14
NECAB3-211ENST00000485399 SCN11AQ9UI33 1791 aa28.43■■■□□ 2.14
NECAB3-211ENST00000485399 ADAMTS7Q9UKP4 1686 aa28.42■■■□□ 2.14
NECAB3-211ENST00000485399 KCNQ2O43526 872 aa28.42■■■□□ 2.14
NECAB3-211ENST00000485399 SPON1Q9HCB6 807 aa28.42■■■□□ 2.14
NECAB3-211ENST00000485399 CEMIPQ8WUJ3 1361 aa28.42■■■□□ 2.14
NECAB3-211ENST00000485399 NHSQ6T4R5 1651 aa28.42■■■□□ 2.14
NECAB3-211ENST00000485399 LGR6Q9HBX8 967 aa28.41■■■□□ 2.14
NECAB3-211ENST00000485399 E9PSI1 815 aa28.4■■■□□ 2.14
NECAB3-211ENST00000485399 SLFN5Q08AF3 891 aa28.38■■■□□ 2.13
NECAB3-211ENST00000485399 KDM6AO15550 1401 aaPredicted RBP28.38■■■□□ 2.13
NECAB3-211ENST00000485399 GNAI1P63096 354 aa28.37■■■□□ 2.13
NECAB3-211ENST00000485399 TEFQ10587 303 aa28.37■■■□□ 2.13
NECAB3-211ENST00000485399 CDCA7LQ96GN5 454 aa28.37■■■□□ 2.13
NECAB3-211ENST00000485399 PDGFDQ9GZP0 370 aaPredicted RBP28.37■■■□□ 2.13
NECAB3-211ENST00000485399 IFT57Q9NWB7 429 aa28.37■■■□□ 2.13
NECAB3-211ENST00000485399 TXNRD1Q16881 649 aa28.36■■■□□ 2.13
NECAB3-211ENST00000485399 CFAP44Q96MT7 982 aa28.36■■■□□ 2.13
NECAB3-211ENST00000485399 MYH16Q9H6N6 1097 aa28.36■■■□□ 2.13
NECAB3-211ENST00000485399 TAF7Q15545 349 aaPredicted RBP28.35■■■□□ 2.13
NECAB3-211ENST00000485399 SPINK5Q9NQ38 1064 aaPredicted RBP28.35■■■□□ 2.13
NECAB3-211ENST00000485399 LAS1LQ9Y4W2 734 aaKnown RBP28.35■■■□□ 2.13
NECAB3-211ENST00000485399 ERVV-2B6SEH9 535 aa28.34■■■□□ 2.13
NECAB3-211ENST00000485399 ZNF853P0CG23 659 aa28.34■■■□□ 2.13
NECAB3-211ENST00000485399 TRMT2AQ8IZ69 625 aaKnown RBP28.33■■■□□ 2.13
NECAB3-211ENST00000485399 BABAM1Q9NWV8 329 aa28.33■■■□□ 2.13
NECAB3-211ENST00000485399 PPP1R1BQ9UD71 204 aaPredicted RBP28.33■■■□□ 2.13
NECAB3-211ENST00000485399 SLC52A2Q9HAB3 445 aa28.32■■■□□ 2.12
NECAB3-211ENST00000485399 SIPA1L3O60292 1781 aaPredicted RBP28.31■■■□□ 2.12
NECAB3-211ENST00000485399 MRC1P22897 1456 aa28.31■■■□□ 2.12
NECAB3-211ENST00000485399 BTAF1O14981 1849 aa28.31■■■□□ 2.12
NECAB3-211ENST00000485399 CHL1O00533 1208 aa28.31■■■□□ 2.12
NECAB3-211ENST00000485399 CENPBP07199 599 aaPredicted RBP28.31■■■□□ 2.12
NECAB3-211ENST00000485399 CABP4P57796 275 aa28.31■■■□□ 2.12
NECAB3-211ENST00000485399 UTRNP46939 3433 aa28.3■■■□□ 2.12
NECAB3-211ENST00000485399 PAPPAQ13219 1627 aa28.29■■■□□ 2.12
NECAB3-211ENST00000485399 TOGARAM1Q9Y4F4 1720 aa28.29■■■□□ 2.12
NECAB3-211ENST00000485399 DUSP27Q5VZP5 1158 aa28.29■■■□□ 2.12
NECAB3-211ENST00000485399 ACSBG1Q96GR2 724 aa28.28■■■□□ 2.12
NECAB3-211ENST00000485399 TSPYL4Q9UJ04 414 aa28.28■■■□□ 2.12
NECAB3-211ENST00000485399 SLC15A2Q16348 729 aa28.27■■■□□ 2.12
NECAB3-211ENST00000485399 NFATC2IPQ8NCF5 419 aa28.27■■■□□ 2.12
NECAB3-211ENST00000485399 MBIPQ9NS73 344 aa28.27■■■□□ 2.12
NECAB3-211ENST00000485399 FANCIQ9NVI1 1328 aa28.27■■■□□ 2.12
NECAB3-211ENST00000485399 BTBD11A6QL63 1104 aa28.26■■■□□ 2.12
NECAB3-211ENST00000485399 TSR2Q969E8 191 aaKnown RBP28.26■■■□□ 2.12
NECAB3-211ENST00000485399 DOT1LQ8TEK3 1739 aa28.26■■■□□ 2.11
NECAB3-211ENST00000485399 ZBTB7AO95365 584 aa28.25■■■□□ 2.11
NECAB3-211ENST00000485399 PTGER2P43116 358 aa28.25■■■□□ 2.11
NECAB3-211ENST00000485399 STK32BQ9NY57 414 aa28.25■■■□□ 2.11
NECAB3-211ENST00000485399 ITGB4P16144 1822 aa28.25■■■□□ 2.11
NECAB3-211ENST00000485399 TMOD3Q9NYL9 352 aa28.24■■■□□ 2.11
NECAB3-211ENST00000485399 MIS18AQ9NYP9 233 aa28.24■■■□□ 2.11
NECAB3-211ENST00000485399 KDM3BQ7LBC6 1761 aa28.23■■■□□ 2.11
NECAB3-211ENST00000485399 KAT6BQ8WYB5 2073 aa28.22■■■□□ 2.11
NECAB3-211ENST00000485399 PRIM1P49642 420 aaKnown RBP28.21■■■□□ 2.11
NECAB3-211ENST00000485399 ATF5Q9Y2D1 282 aaPredicted RBP28.2■■■□□ 2.1
NECAB3-211ENST00000485399 SYTL4Q96C24 671 aaPredicted RBP28.19■■■□□ 2.1
NECAB3-211ENST00000485399 YY1P25490 414 aa28.18■■■□□ 2.1
NECAB3-211ENST00000485399 EXOSC9Q06265 439 aaKnown RBP28.18■■■□□ 2.1
NECAB3-211ENST00000485399 PIGBQ92521 554 aa28.18■■■□□ 2.1
NECAB3-211ENST00000485399 ZNF790Q6PG37 636 aa28.17■■■□□ 2.1
NECAB3-211ENST00000485399 SGIP1Q9BQI5 828 aa28.17■■■□□ 2.1
NECAB3-211ENST00000485399 TTC5Q8N0Z6 440 aa28.16■■■□□ 2.1
NECAB3-211ENST00000485399 LRRC4BQ9NT99 713 aa28.16■■■□□ 2.1
NECAB3-211ENST00000485399 MTFR1LQ9H019 292 aa28.15■■■□□ 2.1
NECAB3-211ENST00000485399 CT47B1P0C2W7 299 aaPredicted RBP28.14■■■□□ 2.1
NECAB3-211ENST00000485399 SLC39A6Q13433 755 aa28.14■■■□□ 2.1
NECAB3-211ENST00000485399 ZNF827Q17R98 1081 aa28.14■■■□□ 2.1
NECAB3-211ENST00000485399 KCNQ3O43525 872 aa28.13■■■□□ 2.09
NECAB3-211ENST00000485399 EIF4A1P60842 406 aaKnown RBP28.13■■■□□ 2.09
NECAB3-211ENST00000485399 QSER1Q2KHR3 1735 aa28.12■■■□□ 2.09
NECAB3-211ENST00000485399 C8orf58Q8NAV2 365 aa28.11■■■□□ 2.09
NECAB3-211ENST00000485399 SOS1Q07889 1333 aaPredicted RBP28.11■■■□□ 2.09
NECAB3-211ENST00000485399 DCAF8L1A6NGE4 600 aa28.1■■■□□ 2.09
NECAB3-211ENST00000485399 TWISTNBQ3B726 338 aaPredicted RBP28.1■■■□□ 2.09
NECAB3-211ENST00000485399 FMNL2Q96PY5 1086 aa28.1■■■□□ 2.09
NECAB3-211ENST00000485399 FHDC1Q9C0D6 1143 aaPredicted RBP28.1■■■□□ 2.09
NECAB3-211ENST00000485399 ATG3Q9NT62 314 aa28.1■■■□□ 2.09
NECAB3-211ENST00000485399 UBR2Q8IWV8 1755 aa28.09■■■□□ 2.09
NECAB3-211ENST00000485399 LY75O60449 1722 aa28.09■■■□□ 2.09
NECAB3-211ENST00000485399 GOLGB1Q14789 3259 aaKnown RBP28.09■■■□□ 2.09
NECAB3-211ENST00000485399 ASAP1Q9ULH1 1129 aa28.09■■■□□ 2.09
NECAB3-211ENST00000485399 TUBGCP6Q96RT7 1819 aa28.08■■■□□ 2.09
NECAB3-211ENST00000485399 KRT24Q2M2I5 525 aa28.08■■■□□ 2.09
NECAB3-211ENST00000485399 TSPYL6Q8N831 410 aa28.08■■■□□ 2.09
NECAB3-211ENST00000485399 AKT1S1Q96B36 256 aa28.08■■■□□ 2.09
NECAB3-211ENST00000485399 SYT17Q9BSW7 474 aa28.08■■■□□ 2.09
NECAB3-211ENST00000485399 ELL2O00472 640 aaPredicted RBP28.07■■■□□ 2.08
NECAB3-211ENST00000485399 VAMP4O75379 141 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms