RNA–Protein interactions for RNA: ENST00000484388.1

ABCA4-206, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 2

Gene ABCA4, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-206ENST00000484388 FOXK2Q01167 660 aa3.83□□□□□ -1.8
ABCA4-206ENST00000484388 NNTQ13423 1086 aa3.83□□□□□ -1.8
ABCA4-206ENST00000484388 SF3B2Q13435 895 aaKnown RBP3.83□□□□□ -1.8
ABCA4-206ENST00000484388 FKBP5Q13451 457 aaPredicted RBP3.83□□□□□ -1.8
ABCA4-206ENST00000484388 MTFR1Q15390 333 aa3.83□□□□□ -1.8
ABCA4-206ENST00000484388 Q6ZVU0 165 aa3.83□□□□□ -1.8
ABCA4-206ENST00000484388 KLF16Q9BXK1 252 aaPredicted RBP3.83□□□□□ -1.8
ABCA4-206ENST00000484388 ATAD2Q6PL18 1390 aa3.83□□□□□ -1.8
ABCA4-206ENST00000484388 A6NJY4 79 aa3.82□□□□□ -1.8
ABCA4-206ENST00000484388 CDK2AP1O14519 115 aa3.82□□□□□ -1.8
ABCA4-206ENST00000484388 C21orf2O43822 256 aa3.82□□□□□ -1.8
ABCA4-206ENST00000484388 STAU1O95793 577 aaKnown RBP3.82□□□□□ -1.8
ABCA4-206ENST00000484388 ALDH1A1P00352 501 aa3.82□□□□□ -1.8
ABCA4-206ENST00000484388 SCNN1AP37088 669 aa3.82□□□□□ -1.8
ABCA4-206ENST00000484388 RANGAP1P46060 587 aaPredicted RBP3.82□□□□□ -1.8
ABCA4-206ENST00000484388 POTEAQ6S8J7 498 aa3.82□□□□□ -1.8
ABCA4-206ENST00000484388 TNS4Q8IZW8 715 aa3.82□□□□□ -1.8
ABCA4-206ENST00000484388 KDF1Q8NAX2 398 aaPredicted RBP3.82□□□□□ -1.8
ABCA4-206ENST00000484388 SCG3Q8WXD2 468 aaKnown RBP3.82□□□□□ -1.8
ABCA4-206ENST00000484388 ESYT1Q9BSJ8 1104 aa3.82□□□□□ -1.8
ABCA4-206ENST00000484388 PRKD2Q9BZL6 878 aa3.82□□□□□ -1.8
ABCA4-206ENST00000484388 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.82□□□□□ -1.8
ABCA4-206ENST00000484388 PLA2G2EQ9NZK7 142 aa3.82□□□□□ -1.8
ABCA4-206ENST00000484388 SEPT3Q9UH03 358 aa3.82□□□□□ -1.8
ABCA4-206ENST00000484388 SERTAD1Q9UHV2 236 aa3.82□□□□□ -1.8
ABCA4-206ENST00000484388 WASF2Q9Y6W5 498 aa3.82□□□□□ -1.8
ABCA4-206ENST00000484388 GDF9O60383 454 aa3.81□□□□□ -1.8
ABCA4-206ENST00000484388 LGR5O75473 907 aa3.81□□□□□ -1.8
ABCA4-206ENST00000484388 IL2RAP01589 272 aa3.81□□□□□ -1.8
ABCA4-206ENST00000484388 NPR3P17342 541 aa3.81□□□□□ -1.8
ABCA4-206ENST00000484388 CLN3Q13286 438 aa3.81□□□□□ -1.8
ABCA4-206ENST00000484388 DNAJC14Q6Y2X3 702 aaPredicted RBP3.81□□□□□ -1.8
ABCA4-206ENST00000484388 SLC9A9Q8IVB4 645 aa3.81□□□□□ -1.8
ABCA4-206ENST00000484388 HELQQ8TDG4 1101 aa3.81□□□□□ -1.8
ABCA4-206ENST00000484388 GTF3C2Q8WUA4 911 aaPredicted RBP3.81□□□□□ -1.8
ABCA4-206ENST00000484388 CNKSR1Q969H4 720 aa3.81□□□□□ -1.8
ABCA4-206ENST00000484388 PURBQ96QR8 312 aaKnown RBP3.81□□□□□ -1.8
ABCA4-206ENST00000484388 TSPAN10Q9H1Z9 355 aaPredicted RBP3.81□□□□□ -1.8
ABCA4-206ENST00000484388 TOR4AQ9NXH8 423 aa3.81□□□□□ -1.8
ABCA4-206ENST00000484388 SCHIP1Q9P0W5 487 aaPredicted RBP3.81□□□□□ -1.8
ABCA4-206ENST00000484388 DNMT3AQ9Y6K1 912 aaPredicted RBP3.81□□□□□ -1.8
ABCA4-206ENST00000484388 A0A1W2PRU2 124 aa3.8□□□□□ -1.8
ABCA4-206ENST00000484388 H3BRB1 525 aa3.8□□□□□ -1.8
ABCA4-206ENST00000484388 PPP1R12BO60237 982 aaPredicted RBP3.8□□□□□ -1.8
ABCA4-206ENST00000484388 ABL1P00519 1130 aa3.8□□□□□ -1.8
ABCA4-206ENST00000484388 TIMP2P16035 220 aa3.8□□□□□ -1.8
ABCA4-206ENST00000484388 PTGIRP43119 386 aa3.8□□□□□ -1.8
ABCA4-206ENST00000484388 HIRAP54198 1017 aaPredicted RBP3.8□□□□□ -1.8
ABCA4-206ENST00000484388 MARSP56192 900 aaKnown RBP3.8□□□□□ -1.8
ABCA4-206ENST00000484388 PSMA6P60900 246 aaKnown RBP3.8□□□□□ -1.8
ABCA4-206ENST00000484388 PRR20EP86478 221 aa3.8□□□□□ -1.8
ABCA4-206ENST00000484388 PRR20CP86479 221 aa3.8□□□□□ -1.8
ABCA4-206ENST00000484388 PRR20DP86480 221 aa3.8□□□□□ -1.8
ABCA4-206ENST00000484388 PRR20BP86481 221 aa3.8□□□□□ -1.8
ABCA4-206ENST00000484388 PRR20AP86496 221 aa3.8□□□□□ -1.8
ABCA4-206ENST00000484388 FKBP4Q02790 459 aaKnown RBP eCLIP3.8□□□□□ -1.8
ABCA4-206ENST00000484388 FOXC1Q12948 553 aa3.8□□□□□ -1.8
ABCA4-206ENST00000484388 TLR1Q15399 786 aa3.8□□□□□ -1.8
ABCA4-206ENST00000484388 ECM1Q16610 540 aa3.8□□□□□ -1.8
ABCA4-206ENST00000484388 FOXD4L5Q5VV16 416 aaPredicted RBP3.8□□□□□ -1.8
ABCA4-206ENST00000484388 CAPN12Q6ZSI9 719 aa3.8□□□□□ -1.8
ABCA4-206ENST00000484388 GLYCTKQ8IVS8 523 aa3.8□□□□□ -1.8
ABCA4-206ENST00000484388 CYP4X1Q8N118 509 aa3.8□□□□□ -1.8
ABCA4-206ENST00000484388 NBPF15Q8N660 670 aa3.8□□□□□ -1.8
ABCA4-206ENST00000484388 FOXD4L4Q8WXT5 416 aaPredicted RBP3.8□□□□□ -1.8
ABCA4-206ENST00000484388 ITPKCQ96DU7 683 aa3.8□□□□□ -1.8
ABCA4-206ENST00000484388 C2orf49Q9BVC5 232 aaPredicted RBP3.8□□□□□ -1.8
ABCA4-206ENST00000484388 FHDC1Q9C0D6 1143 aaPredicted RBP3.8□□□□□ -1.8
ABCA4-206ENST00000484388 TUT1Q9H6E5 874 aaKnown RBP3.8□□□□□ -1.8
ABCA4-206ENST00000484388 ARHGEF10LQ9HCE6 1279 aa3.8□□□□□ -1.8
ABCA4-206ENST00000484388 RAB6BQ9NRW1 208 aa3.8□□□□□ -1.8
ABCA4-206ENST00000484388 IQSEC3Q9UPP2 1182 aaPredicted RBP3.8□□□□□ -1.8
ABCA4-206ENST00000484388 TTC24A2A3L6 582 aaPredicted RBP3.79□□□□□ -1.8
ABCA4-206ENST00000484388 J3QL48 77 aa3.79□□□□□ -1.8
ABCA4-206ENST00000484388 FAM13AO94988 1023 aa3.79□□□□□ -1.8
ABCA4-206ENST00000484388 ZIC2O95409 532 aaPredicted RBP3.79□□□□□ -1.8
ABCA4-206ENST00000484388 SMPD1P17405 629 aa3.79□□□□□ -1.8
ABCA4-206ENST00000484388 GPC1P35052 558 aa3.79□□□□□ -1.8
ABCA4-206ENST00000484388 WDR4P57081 412 aaKnown RBP3.79□□□□□ -1.8
ABCA4-206ENST00000484388 ARHGAP4P98171 946 aa3.79□□□□□ -1.8
ABCA4-206ENST00000484388 CENPCQ03188 943 aa3.79□□□□□ -1.8
ABCA4-206ENST00000484388 CBLBQ13191 982 aa3.79□□□□□ -1.8
ABCA4-206ENST00000484388 ZNF211Q13398 564 aaPredicted RBP3.79□□□□□ -1.8
ABCA4-206ENST00000484388 TEAD4Q15561 434 aa3.79□□□□□ -1.8
ABCA4-206ENST00000484388 C16orf46Q6P387 395 aa3.79□□□□□ -1.8
ABCA4-206ENST00000484388 ZNF295-AS1Q8N0V1 137 aa3.79□□□□□ -1.8
ABCA4-206ENST00000484388 VTI1AQ96AJ9 217 aa3.79□□□□□ -1.8
ABCA4-206ENST00000484388 MKNK1Q9BUB5 465 aa3.79□□□□□ -1.8
ABCA4-206ENST00000484388 BIN2Q9UBW5 565 aaPredicted RBP3.79□□□□□ -1.8
ABCA4-206ENST00000484388 RBM47A0AV96 593 aaKnown RBP3.78□□□□□ -1.8
ABCA4-206ENST00000484388 RGS20O76081 388 aa3.78□□□□□ -1.8
ABCA4-206ENST00000484388 NAA30Q147X3 362 aaPredicted RBP3.78□□□□□ -1.8
ABCA4-206ENST00000484388 NOM1Q5C9Z4 860 aaKnown RBP3.78□□□□□ -1.8
ABCA4-206ENST00000484388 TBCELQ5QJ74 424 aa3.78□□□□□ -1.8
ABCA4-206ENST00000484388 PPARGC1BQ86YN6 1023 aaKnown RBP3.78□□□□□ -1.8
ABCA4-206ENST00000484388 MEIOBQ8N635 442 aa3.78□□□□□ -1.8
ABCA4-206ENST00000484388 CHMP7Q8WUX9 453 aaPredicted RBP3.78□□□□□ -1.8
ABCA4-206ENST00000484388 MYO19Q96H55 970 aa3.78□□□□□ -1.8
ABCA4-206ENST00000484388 NLRP3Q96P20 1036 aa3.78□□□□□ -1.8
ABCA4-206ENST00000484388 ANO2Q9NQ90 1003 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms