RNA–Protein interactions for RNA: ENST00000484213.1

ABCD3-205, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best)

Gene ABCD3, Length 4,367 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-205ENST00000484213 SPATA31A5Q5VU36 1347 aa5.58□□□□□ -1.52
ABCD3-205ENST00000484213 SPATA31A7Q8IWB4 1347 aa5.58□□□□□ -1.52
ABCD3-205ENST00000484213 MINK1Q8N4C8 1332 aaPredicted RBP5.58□□□□□ -1.52
ABCD3-205ENST00000484213 AMOTQ4VCS5 1084 aa5.58□□□□□ -1.52
ABCD3-205ENST00000484213 GIGYF2Q6Y7W6 1299 aaKnown RBP5.58□□□□□ -1.52
ABCD3-205ENST00000484213 NLRP2Q9NX02 1062 aa5.58□□□□□ -1.52
ABCD3-205ENST00000484213 COL14A1Q05707 1796 aaKnown RBP5.57□□□□□ -1.52
ABCD3-205ENST00000484213 DIXDC1Q155Q3 683 aa5.57□□□□□ -1.52
ABCD3-205ENST00000484213 CDK19Q9BWU1 502 aa5.57□□□□□ -1.52
ABCD3-205ENST00000484213 CREBZFQ9NS37 354 aa5.57□□□□□ -1.52
ABCD3-205ENST00000484213 TRAK1Q9UPV9 953 aa5.57□□□□□ -1.52
ABCD3-205ENST00000484213 XRN1Q8IZH2 1706 aaKnown RBP5.57□□□□□ -1.52
ABCD3-205ENST00000484213 COL16A1Q07092 1604 aaPredicted RBP5.57□□□□□ -1.52
ABCD3-205ENST00000484213 CRB1P82279 1406 aa5.57□□□□□ -1.52
ABCD3-205ENST00000484213 RAB3GAP2Q9H2M9 1393 aa5.57□□□□□ -1.52
ABCD3-205ENST00000484213 SPDYE16A6NNV3 312 aaPredicted RBP5.57□□□□□ -1.52
ABCD3-205ENST00000484213 SSTR3P32745 418 aaPredicted RBP5.57□□□□□ -1.52
ABCD3-205ENST00000484213 PLEKHO1Q53GL0 409 aaPredicted RBP5.57□□□□□ -1.52
ABCD3-205ENST00000484213 CARD11Q9BXL7 1154 aa5.57□□□□□ -1.52
ABCD3-205ENST00000484213 NSD2O96028 1365 aa5.57□□□□□ -1.52
ABCD3-205ENST00000484213 CHRDL2Q6WN34 429 aa5.57□□□□□ -1.52
ABCD3-205ENST00000484213 SERPINA10Q9UK55 444 aa5.57□□□□□ -1.52
ABCD3-205ENST00000484213 R3HCC1Q9Y3T6 440 aaKnown RBP5.57□□□□□ -1.52
ABCD3-205ENST00000484213 SBNO2Q9Y2G9 1366 aa5.56□□□□□ -1.52
ABCD3-205ENST00000484213 KNDC1Q76NI1 1749 aa5.56□□□□□ -1.52
ABCD3-205ENST00000484213 KDM2BQ8NHM5 1336 aa5.56□□□□□ -1.52
ABCD3-205ENST00000484213 SMAPO00193 183 aa5.56□□□□□ -1.52
ABCD3-205ENST00000484213 ONECUT3O60422 494 aaPredicted RBP5.56□□□□□ -1.52
ABCD3-205ENST00000484213 NHSL1Q5SYE7 1610 aa5.56□□□□□ -1.52
ABCD3-205ENST00000484213 LOC105371045A0A1W2PR82 267 aa5.56□□□□□ -1.52
ABCD3-205ENST00000484213 GIGYF1O75420 1035 aaPredicted RBP5.56□□□□□ -1.52
ABCD3-205ENST00000484213 SULF1Q8IWU6 871 aa5.56□□□□□ -1.52
ABCD3-205ENST00000484213 ZNF579Q8NAF0 562 aaKnown RBP5.56□□□□□ -1.52
ABCD3-205ENST00000484213 AIDAQ96BJ3 306 aa5.56□□□□□ -1.52
ABCD3-205ENST00000484213 ZC3H4Q9UPT8 1303 aaKnown RBP5.56□□□□□ -1.52
ABCD3-205ENST00000484213 CCDC27Q2M243 656 aa5.56□□□□□ -1.52
ABCD3-205ENST00000484213 PCDHB9Q9Y5E1 797 aa5.56□□□□□ -1.52
ABCD3-205ENST00000484213 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.56□□□□□ -1.52
ABCD3-205ENST00000484213 TTC21BQ7Z4L5 1316 aa5.56□□□□□ -1.52
ABCD3-205ENST00000484213 COL22A1Q8NFW1 1626 aaPredicted RBP5.55□□□□□ -1.52
ABCD3-205ENST00000484213 ARHGEF6Q15052 776 aa5.55□□□□□ -1.52
ABCD3-205ENST00000484213 B4GALNT3Q6L9W6 998 aa5.55□□□□□ -1.52
ABCD3-205ENST00000484213 ZNF652Q9Y2D9 606 aa5.55□□□□□ -1.52
ABCD3-205ENST00000484213 KTN1Q86UP2 1357 aaKnown RBP5.55□□□□□ -1.52
ABCD3-205ENST00000484213 USP47Q96K76 1375 aa5.55□□□□□ -1.52
ABCD3-205ENST00000484213 CLTCL1P53675 1640 aa5.55□□□□□ -1.52
ABCD3-205ENST00000484213 TRIM66O15016 1216 aa5.55□□□□□ -1.52
ABCD3-205ENST00000484213 LGR5O75473 907 aa5.55□□□□□ -1.52
ABCD3-205ENST00000484213 ZNF594Q96JF6 807 aaPredicted RBP5.55□□□□□ -1.52
ABCD3-205ENST00000484213 PNMA3Q9UL41 463 aa5.55□□□□□ -1.52
ABCD3-205ENST00000484213 NWD2Q9ULI1 1742 aa5.55□□□□□ -1.52
ABCD3-205ENST00000484213 WDR17Q8IZU2 1322 aa5.55□□□□□ -1.52
ABCD3-205ENST00000484213 PCDH11XQ9BZA7 1347 aa5.55□□□□□ -1.52
ABCD3-205ENST00000484213 PCDH11YQ9BZA8 1340 aa5.55□□□□□ -1.52
ABCD3-205ENST00000484213 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.55□□□□□ -1.52
ABCD3-205ENST00000484213 EIF5BO60841 1220 aaKnown RBP5.55□□□□□ -1.52
ABCD3-205ENST00000484213 CALD1Q05682 793 aaKnown RBP5.55□□□□□ -1.52
ABCD3-205ENST00000484213 TBC1D8BQ0IIM8 1120 aa5.55□□□□□ -1.52
ABCD3-205ENST00000484213 MS4A3Q96HJ5 214 aa5.55□□□□□ -1.52
ABCD3-205ENST00000484213 MFRPQ9BY79 579 aa5.55□□□□□ -1.52
ABCD3-205ENST00000484213 SPATA31A1Q5TZJ5 1347 aa5.54□□□□□ -1.52
ABCD3-205ENST00000484213 CLK2P49760 499 aaKnown RBP5.54□□□□□ -1.52
ABCD3-205ENST00000484213 FAM98CQ17RN3 349 aaKnown RBP5.54□□□□□ -1.52
ABCD3-205ENST00000484213 NLGN1Q8N2Q7 840 aa5.54□□□□□ -1.52
ABCD3-205ENST00000484213 METP08581 1390 aa5.54□□□□□ -1.52
ABCD3-205ENST00000484213 CCDC85CA6NKD9 419 aa5.54□□□□□ -1.52
ABCD3-205ENST00000484213 CD2APQ9Y5K6 639 aa5.54□□□□□ -1.52
ABCD3-205ENST00000484213 GJA3Q9Y6H8 435 aa5.54□□□□□ -1.52
ABCD3-205ENST00000484213 BCL9O00512 1426 aa5.54□□□□□ -1.52
ABCD3-205ENST00000484213 RGPD1P0DJD0 1748 aa5.54□□□□□ -1.52
ABCD3-205ENST00000484213 LMOD3Q0VAK6 560 aa5.54□□□□□ -1.52
ABCD3-205ENST00000484213 HDAC5Q9UQL6 1122 aa5.54□□□□□ -1.52
ABCD3-205ENST00000484213 CHMP3Q9Y3E7 222 aa5.54□□□□□ -1.52
ABCD3-205ENST00000484213 SLIT2O94813 1529 aa5.54□□□□□ -1.52
ABCD3-205ENST00000484213 OXLD1Q5BKU9 147 aa5.53□□□□□ -1.52
ABCD3-205ENST00000484213 BOLA1Q9Y3E2 137 aa5.53□□□□□ -1.52
ABCD3-205ENST00000484213 RGS12O14924 1447 aa5.53□□□□□ -1.52
ABCD3-205ENST00000484213 E9PCH4 1651 aa5.53□□□□□ -1.52
ABCD3-205ENST00000484213 ROBO2Q9HCK4 1378 aa5.53□□□□□ -1.52
ABCD3-205ENST00000484213 CC2D2BQ6DHV5 1058 aa5.53□□□□□ -1.52
ABCD3-205ENST00000484213 LARP1Q6PKG0 1096 aaKnown RBP5.53□□□□□ -1.52
ABCD3-205ENST00000484213 PNISRQ8TF01 805 aaKnown RBP5.53□□□□□ -1.52
ABCD3-205ENST00000484213 C2orf72A6NCS6 295 aa5.53□□□□□ -1.52
ABCD3-205ENST00000484213 DPY19L2Q6NUT2 758 aa5.53□□□□□ -1.52
ABCD3-205ENST00000484213 ORAI2Q96SN7 254 aa5.53□□□□□ -1.52
ABCD3-205ENST00000484213 MKNK1Q9BUB5 465 aa5.53□□□□□ -1.52
ABCD3-205ENST00000484213 PARP3Q9Y6F1 533 aa5.53□□□□□ -1.52
ABCD3-205ENST00000484213 SSH2Q76I76 1423 aa5.53□□□□□ -1.52
ABCD3-205ENST00000484213 GCP02774 474 aa5.53□□□□□ -1.52
ABCD3-205ENST00000484213 HIRIP3Q9BW71 556 aaPredicted RBP5.53□□□□□ -1.52
ABCD3-205ENST00000484213 ACEP12821 1306 aa5.52□□□□□ -1.53
ABCD3-205ENST00000484213 EDC4Q6P2E9 1401 aaKnown RBP5.52□□□□□ -1.53
ABCD3-205ENST00000484213 FAM177BA6PVY3 158 aa5.52□□□□□ -1.53
ABCD3-205ENST00000484213 CAPN2P17655 700 aa5.52□□□□□ -1.53
ABCD3-205ENST00000484213 PACS2Q86VP3 889 aa5.52□□□□□ -1.53
ABCD3-205ENST00000484213 KNSTRNQ9Y448 316 aa5.52□□□□□ -1.53
ABCD3-205ENST00000484213 ZBBXA8MT70 800 aa5.52□□□□□ -1.53
ABCD3-205ENST00000484213 ZPR1O75312 459 aa5.52□□□□□ -1.53
ABCD3-205ENST00000484213 CFAP70Q5T0N1 1121 aa5.52□□□□□ -1.53
ABCD3-205ENST00000484213 PPP4R4Q6NUP7 873 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms