RNA–Protein interactions for RNA: ENST00000483443.1

LRRFIP1-212, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 3

Gene LRRFIP1, Length 1,069 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-212ENST00000483443 GPBP1L1Q9HC44 474 aaPredicted RBP17.72■□□□□ 0.43
LRRFIP1-212ENST00000483443 POLKQ9UBT6 870 aa17.72■□□□□ 0.43
LRRFIP1-212ENST00000483443 ASAP1Q9ULH1 1129 aa17.71■□□□□ 0.43
LRRFIP1-212ENST00000483443 UBR3Q6ZT12 1888 aa17.71■□□□□ 0.43
LRRFIP1-212ENST00000483443 TNNT2P45379 298 aaPredicted RBP17.7■□□□□ 0.42
LRRFIP1-212ENST00000483443 AMIGO3Q86WK7 504 aa17.7■□□□□ 0.42
LRRFIP1-212ENST00000483443 HSP90AB1P08238 724 aaKnown RBP17.69■□□□□ 0.42
LRRFIP1-212ENST00000483443 EIF4A2Q14240 407 aaKnown RBP17.69■□□□□ 0.42
LRRFIP1-212ENST00000483443 CLSPNQ9HAW4 1339 aa17.69■□□□□ 0.42
LRRFIP1-212ENST00000483443 ITPK1Q13572 414 aa17.68■□□□□ 0.42
LRRFIP1-212ENST00000483443 SMIM5Q71RC9 77 aa17.68■□□□□ 0.42
LRRFIP1-212ENST00000483443 ADCY9O60503 1353 aa17.67■□□□□ 0.42
LRRFIP1-212ENST00000483443 ATG3Q9NT62 314 aa17.67■□□□□ 0.42
LRRFIP1-212ENST00000483443 WWC3Q9ULE0 1092 aa17.67■□□□□ 0.42
LRRFIP1-212ENST00000483443 RTCBQ9Y3I0 505 aaKnown RBP17.67■□□□□ 0.42
LRRFIP1-212ENST00000483443 MAP2P11137 1827 aaKnown RBP17.67■□□□□ 0.42
LRRFIP1-212ENST00000483443 ERVV-2B6SEH9 535 aa17.66■□□□□ 0.42
LRRFIP1-212ENST00000483443 MMP10P09238 476 aa17.66■□□□□ 0.42
LRRFIP1-212ENST00000483443 ZNF526Q8TF50 670 aaPredicted RBP17.66■□□□□ 0.42
LRRFIP1-212ENST00000483443 DCAF5Q96JK2 942 aa17.66■□□□□ 0.42
LRRFIP1-212ENST00000483443 PLEKHO1Q53GL0 409 aaPredicted RBP17.65■□□□□ 0.42
LRRFIP1-212ENST00000483443 TRAPPC3LQ5T215 181 aa17.65■□□□□ 0.42
LRRFIP1-212ENST00000483443 RBM42Q9BTD8 480 aaKnown RBP17.65■□□□□ 0.42
LRRFIP1-212ENST00000483443 CEP350Q5VT06 3117 aa17.65■□□□□ 0.42
LRRFIP1-212ENST00000483443 NCBP3Q53F19 620 aaKnown RBP17.64■□□□□ 0.41
LRRFIP1-212ENST00000483443 NLGN1Q8N2Q7 840 aa17.64■□□□□ 0.41
LRRFIP1-212ENST00000483443 KDRP35968 1356 aa17.64■□□□□ 0.41
LRRFIP1-212ENST00000483443 EIF4G2P78344 907 aaKnown RBP eCLIP17.63■□□□□ 0.41
LRRFIP1-212ENST00000483443 AMOTQ4VCS5 1084 aa17.63■□□□□ 0.41
LRRFIP1-212ENST00000483443 ZNF530Q6P9A1 599 aaPredicted RBP17.63■□□□□ 0.41
LRRFIP1-212ENST00000483443 CABP4P57796 275 aa17.62■□□□□ 0.41
LRRFIP1-212ENST00000483443 TGFB2P61812 414 aa17.62■□□□□ 0.41
LRRFIP1-212ENST00000483443 C1orf141Q5JVX7 400 aa17.62■□□□□ 0.41
LRRFIP1-212ENST00000483443 RFC4P35249 363 aa17.61■□□□□ 0.41
LRRFIP1-212ENST00000483443 RC3H1Q5TC82 1133 aaKnown RBP17.61■□□□□ 0.41
LRRFIP1-212ENST00000483443 CCDC87Q9NVE4 849 aa17.61■□□□□ 0.41
LRRFIP1-212ENST00000483443 CNTNAP4Q9C0A0 1308 aa17.61■□□□□ 0.41
LRRFIP1-212ENST00000483443 HSPA6P17066 643 aa17.6■□□□□ 0.41
LRRFIP1-212ENST00000483443 PANK3Q9H999 370 aa17.6■□□□□ 0.41
LRRFIP1-212ENST00000483443 PXDNLA1KZ92 1463 aa17.6■□□□□ 0.41
LRRFIP1-212ENST00000483443 CICQ96RK0 1608 aaPredicted RBP17.6■□□□□ 0.41
LRRFIP1-212ENST00000483443 ZNF831Q5JPB2 1677 aa17.6■□□□□ 0.41
LRRFIP1-212ENST00000483443 MTHFSP49914 203 aa17.59■□□□□ 0.41
LRRFIP1-212ENST00000483443 MORC1Q86VD1 984 aa17.59■□□□□ 0.41
LRRFIP1-212ENST00000483443 PCGF6Q9BYE7 350 aa17.59■□□□□ 0.41
LRRFIP1-212ENST00000483443 BCS1LQ9Y276 419 aa17.59■□□□□ 0.41
LRRFIP1-212ENST00000483443 PARP3Q9Y6F1 533 aa17.59■□□□□ 0.41
LRRFIP1-212ENST00000483443 KDM6AO15550 1401 aaPredicted RBP17.58■□□□□ 0.41
LRRFIP1-212ENST00000483443 C10orf71Q711Q0 1435 aa17.58■□□□□ 0.41
LRRFIP1-212ENST00000483443 RPS6KA4O75676 772 aa17.58■□□□□ 0.4
LRRFIP1-212ENST00000483443 ARHGEF1Q92888 912 aaKnown RBP17.58■□□□□ 0.4
LRRFIP1-212ENST00000483443 HSPA5P11021 654 aaKnown RBP17.57■□□□□ 0.4
LRRFIP1-212ENST00000483443 SLC4A9Q96Q91 983 aa17.57■□□□□ 0.4
LRRFIP1-212ENST00000483443 PTCD1O75127 700 aaKnown RBP17.56■□□□□ 0.4
LRRFIP1-212ENST00000483443 GYS1P13807 737 aa17.56■□□□□ 0.4
LRRFIP1-212ENST00000483443 A0A0G2JLW4 131 aa17.55■□□□□ 0.4
LRRFIP1-212ENST00000483443 KNSTRNQ9Y448 316 aa17.55■□□□□ 0.4
LRRFIP1-212ENST00000483443 KIF13BQ9NQT8 1826 aa17.55■□□□□ 0.4
LRRFIP1-212ENST00000483443 COL5A3P25940 1745 aaPredicted RBP17.55■□□□□ 0.4
LRRFIP1-212ENST00000483443 NPM3O75607 178 aaKnown RBP17.54■□□□□ 0.4
LRRFIP1-212ENST00000483443 FCHSD2O94868 740 aa17.54■□□□□ 0.4
LRRFIP1-212ENST00000483443 SULT6B1Q6IMI4 303 aa17.54■□□□□ 0.4
LRRFIP1-212ENST00000483443 C4AP0C0L4 1744 aa17.54■□□□□ 0.4
LRRFIP1-212ENST00000483443 KIF3CO14782 793 aa17.53■□□□□ 0.4
LRRFIP1-212ENST00000483443 CRKLP46109 303 aaKnown RBP17.53■□□□□ 0.4
LRRFIP1-212ENST00000483443 ARHGAP27Q6ZUM4 889 aa17.53■□□□□ 0.4
LRRFIP1-212ENST00000483443 AEBP1Q8IUX7 1158 aa17.53■□□□□ 0.4
LRRFIP1-212ENST00000483443 DPEP1P16444 411 aa17.52■□□□□ 0.4
LRRFIP1-212ENST00000483443 IFFO2Q5TF58 517 aa17.52■□□□□ 0.4
LRRFIP1-212ENST00000483443 NFATC2IPQ8NCF5 419 aa17.52■□□□□ 0.4
LRRFIP1-212ENST00000483443 N4BP2Q86UW6 1770 aaPredicted RBP17.51■□□□□ 0.39
LRRFIP1-212ENST00000483443 USP42Q9H9J4 1324 aaKnown RBP17.5■□□□□ 0.39
LRRFIP1-212ENST00000483443 KIAA1551Q9HCM1 1747 aa17.5■□□□□ 0.39
LRRFIP1-212ENST00000483443 AKAP4Q5JQC9 854 aa17.5■□□□□ 0.39
LRRFIP1-212ENST00000483443 PIM2Q9P1W9 311 aa17.5■□□□□ 0.39
LRRFIP1-212ENST00000483443 TOMM70O94826 608 aa17.49■□□□□ 0.39
LRRFIP1-212ENST00000483443 ZPR1O75312 459 aa17.48■□□□□ 0.39
LRRFIP1-212ENST00000483443 IL13P35225 146 aa17.48■□□□□ 0.39
LRRFIP1-212ENST00000483443 APLP1P51693 650 aa17.48■□□□□ 0.39
LRRFIP1-212ENST00000483443 SRP68Q9UHB9 627 aaKnown RBP17.48■□□□□ 0.39
LRRFIP1-212ENST00000483443 FKBP8Q14318 412 aa17.47■□□□□ 0.39
LRRFIP1-212ENST00000483443 DALRD3Q5D0E6 543 aaKnown RBP17.47■□□□□ 0.39
LRRFIP1-212ENST00000483443 C16orf71Q8IYS4 520 aaPredicted RBP17.47■□□□□ 0.39
LRRFIP1-212ENST00000483443 C9orf131Q5VYM1 1079 aa17.46■□□□□ 0.39
LRRFIP1-212ENST00000483443 SLC52A2Q9HAB3 445 aa17.46■□□□□ 0.39
LRRFIP1-212ENST00000483443 CCER1Q8TC90 406 aaPredicted RBP17.45■□□□□ 0.38
LRRFIP1-212ENST00000483443 TJP1Q07157 1748 aa17.44■□□□□ 0.38
LRRFIP1-212ENST00000483443 MYH14Q7Z406 1995 aaKnown RBP17.44■□□□□ 0.38
LRRFIP1-212ENST00000483443 KCNA3P22001 575 aa17.44■□□□□ 0.38
LRRFIP1-212ENST00000483443 DDR1Q08345 913 aa17.44■□□□□ 0.38
LRRFIP1-212ENST00000483443 INTS5Q6P9B9 1019 aaKnown RBP17.44■□□□□ 0.38
LRRFIP1-212ENST00000483443 KDM2BQ8NHM5 1336 aa17.44■□□□□ 0.38
LRRFIP1-212ENST00000483443 POLRMTO00411 1230 aaKnown RBP17.43■□□□□ 0.38
LRRFIP1-212ENST00000483443 USPL1Q5W0Q7 1092 aa17.43■□□□□ 0.38
LRRFIP1-212ENST00000483443 DNAJC10Q8IXB1 793 aa17.43■□□□□ 0.38
LRRFIP1-212ENST00000483443 NMRK2Q9NPI5 230 aa17.43■□□□□ 0.38
LRRFIP1-212ENST00000483443 BRCA1P38398 1863 aaKnown RBP17.43■□□□□ 0.38
LRRFIP1-212ENST00000483443 MRC1P22897 1456 aa17.43■□□□□ 0.38
LRRFIP1-212ENST00000483443 SCN11AQ9UI33 1791 aa17.43■□□□□ 0.38
LRRFIP1-212ENST00000483443 RNMTO43148 476 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms