RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 ATG3Q9NT62 314 aa26.58■■□□□ 1.85
R3HDM1-215ENST00000483021 KIF7Q2M1P5 1343 aa26.58■■□□□ 1.85
R3HDM1-215ENST00000483021 PHF14O94880 888 aa26.57■■□□□ 1.84
R3HDM1-215ENST00000483021 ZNF530Q6P9A1 599 aaPredicted RBP26.57■■□□□ 1.84
R3HDM1-215ENST00000483021 KDRP35968 1356 aa26.57■■□□□ 1.84
R3HDM1-215ENST00000483021 COL5A3P25940 1745 aaPredicted RBP26.56■■□□□ 1.84
R3HDM1-215ENST00000483021 AMER1Q5JTC6 1135 aaPredicted RBP26.56■■□□□ 1.84
R3HDM1-215ENST00000483021 CD2APQ9Y5K6 639 aa26.56■■□□□ 1.84
R3HDM1-215ENST00000483021 KDM6AO15550 1401 aaPredicted RBP26.56■■□□□ 1.84
R3HDM1-215ENST00000483021 ITPK1Q13572 414 aa26.55■■□□□ 1.84
R3HDM1-215ENST00000483021 AMIGO3Q86WK7 504 aa26.55■■□□□ 1.84
R3HDM1-215ENST00000483021 AEBP1Q8IUX7 1158 aa26.54■■□□□ 1.84
R3HDM1-215ENST00000483021 GNPATO15228 680 aa26.53■■□□□ 1.84
R3HDM1-215ENST00000483021 C1orf141Q5JVX7 400 aa26.53■■□□□ 1.84
R3HDM1-215ENST00000483021 GRIN3BO60391 1043 aa26.52■■□□□ 1.84
R3HDM1-215ENST00000483021 SULT6B1Q6IMI4 303 aa26.52■■□□□ 1.84
R3HDM1-215ENST00000483021 SCN11AQ9UI33 1791 aa26.52■■□□□ 1.84
R3HDM1-215ENST00000483021 IL13P35225 146 aa26.51■■□□□ 1.83
R3HDM1-215ENST00000483021 MTHFSP49914 203 aa26.5■■□□□ 1.83
R3HDM1-215ENST00000483021 CABP4P57796 275 aa26.5■■□□□ 1.83
R3HDM1-215ENST00000483021 YBX3P16989 372 aaKnown RBP eCLIP26.48■■□□□ 1.83
R3HDM1-215ENST00000483021 SMIM5Q71RC9 77 aa26.48■■□□□ 1.83
R3HDM1-215ENST00000483021 RBM42Q9BTD8 480 aaKnown RBP26.48■■□□□ 1.83
R3HDM1-215ENST00000483021 CICQ96RK0 1608 aaPredicted RBP26.47■■□□□ 1.83
R3HDM1-215ENST00000483021 VIRMAQ69YN4 1812 aaKnown RBP26.47■■□□□ 1.83
R3HDM1-215ENST00000483021 RTCBQ9Y3I0 505 aaKnown RBP26.47■■□□□ 1.83
R3HDM1-215ENST00000483021 CNTNAP4Q9C0A0 1308 aa26.46■■□□□ 1.83
R3HDM1-215ENST00000483021 RC3H1Q5TC82 1133 aaKnown RBP26.45■■□□□ 1.82
R3HDM1-215ENST00000483021 SLC4A9Q96Q91 983 aa26.45■■□□□ 1.82
R3HDM1-215ENST00000483021 PER1O15534 1290 aaPredicted RBP26.44■■□□□ 1.82
R3HDM1-215ENST00000483021 ADRA2BP18089 450 aa26.44■■□□□ 1.82
R3HDM1-215ENST00000483021 C4AP0C0L4 1744 aa26.44■■□□□ 1.82
R3HDM1-215ENST00000483021 MYH14Q7Z406 1995 aaKnown RBP26.44■■□□□ 1.82
R3HDM1-215ENST00000483021 TRAPPC3LQ5T215 181 aa26.43■■□□□ 1.82
R3HDM1-215ENST00000483021 KIF13BQ9NQT8 1826 aa26.43■■□□□ 1.82
R3HDM1-215ENST00000483021 TJP1Q07157 1748 aa26.42■■□□□ 1.82
R3HDM1-215ENST00000483021 AKAP4Q5JQC9 854 aa26.41■■□□□ 1.82
R3HDM1-215ENST00000483021 NFATC2IPQ8NCF5 419 aa26.41■■□□□ 1.82
R3HDM1-215ENST00000483021 NPC1L1Q9UHC9 1359 aa26.41■■□□□ 1.82
R3HDM1-215ENST00000483021 CC2D1BQ5T0F9 858 aaKnown RBP26.4■■□□□ 1.82
R3HDM1-215ENST00000483021 MRC1P22897 1456 aa26.39■■□□□ 1.82
R3HDM1-215ENST00000483021 PTCD1O75127 700 aaKnown RBP26.38■■□□□ 1.81
R3HDM1-215ENST00000483021 RPS6KA4O75676 772 aa26.38■■□□□ 1.81
R3HDM1-215ENST00000483021 MMP10P09238 476 aa26.38■■□□□ 1.81
R3HDM1-215ENST00000483021 NLGN1Q8N2Q7 840 aa26.38■■□□□ 1.81
R3HDM1-215ENST00000483021 ADAMTS7Q9UKP4 1686 aa26.38■■□□□ 1.81
R3HDM1-215ENST00000483021 DIAPH1O60610 1272 aaKnown RBP26.37■■□□□ 1.81
R3HDM1-215ENST00000483021 HMOX1P09601 288 aa26.36■■□□□ 1.81
R3HDM1-215ENST00000483021 RFC4P35249 363 aa26.36■■□□□ 1.81
R3HDM1-215ENST00000483021 ARHGEF1Q92888 912 aaKnown RBP26.36■■□□□ 1.81
R3HDM1-215ENST00000483021 KIAA1551Q9HCM1 1747 aa26.35■■□□□ 1.81
R3HDM1-215ENST00000483021 SLC52A2Q9HAB3 445 aa26.34■■□□□ 1.81
R3HDM1-215ENST00000483021 COL3A1P02461 1466 aaPredicted RBP26.34■■□□□ 1.81
R3HDM1-215ENST00000483021 CRKLP46109 303 aaKnown RBP26.33■■□□□ 1.81
R3HDM1-215ENST00000483021 C10orf71Q711Q0 1435 aa26.32■■□□□ 1.8
R3HDM1-215ENST00000483021 GIGYF1O75420 1035 aaPredicted RBP26.32■■□□□ 1.8
R3HDM1-215ENST00000483021 GYS1P13807 737 aa26.32■■□□□ 1.8
R3HDM1-215ENST00000483021 C1QTNF8P60827 252 aa26.32■■□□□ 1.8
R3HDM1-215ENST00000483021 N4BP2Q86UW6 1770 aaPredicted RBP26.32■■□□□ 1.8
R3HDM1-215ENST00000483021 PXDNLA1KZ92 1463 aa26.31■■□□□ 1.8
R3HDM1-215ENST00000483021 RNMTO43148 476 aaKnown RBP26.31■■□□□ 1.8
R3HDM1-215ENST00000483021 UBR2Q8IWV8 1755 aa26.29■■□□□ 1.8
R3HDM1-215ENST00000483021 TGFB2P61812 414 aa26.29■■□□□ 1.8
R3HDM1-215ENST00000483021 MTHFSDQ2M296 383 aaKnown RBP26.29■■□□□ 1.8
R3HDM1-215ENST00000483021 LGR6Q9HBX8 967 aa26.29■■□□□ 1.8
R3HDM1-215ENST00000483021 CCDC87Q9NVE4 849 aa26.29■■□□□ 1.8
R3HDM1-215ENST00000483021 ATP10DQ9P241 1426 aa26.29■■□□□ 1.8
R3HDM1-215ENST00000483021 PARP3Q9Y6F1 533 aa26.28■■□□□ 1.8
R3HDM1-215ENST00000483021 ADCY9O60503 1353 aa26.28■■□□□ 1.8
R3HDM1-215ENST00000483021 KCPQ6ZWJ8 1503 aa26.28■■□□□ 1.8
R3HDM1-215ENST00000483021 BRCA1P38398 1863 aaKnown RBP26.28■■□□□ 1.8
R3HDM1-215ENST00000483021 WWC3Q9ULE0 1092 aa26.27■■□□□ 1.8
R3HDM1-215ENST00000483021 USP42Q9H9J4 1324 aaKnown RBP26.26■■□□□ 1.79
R3HDM1-215ENST00000483021 U2SURPO15042 1029 aaKnown RBP26.24■■□□□ 1.79
R3HDM1-215ENST00000483021 INTS5Q6P9B9 1019 aaKnown RBP26.24■■□□□ 1.79
R3HDM1-215ENST00000483021 DNAJC10Q8IXB1 793 aa26.24■■□□□ 1.79
R3HDM1-215ENST00000483021 CNGB1Q14028 1251 aaPredicted RBP26.23■■□□□ 1.79
R3HDM1-215ENST00000483021 SENP3-EIF4A1A0A087X0R7 540 aa26.22■■□□□ 1.79
R3HDM1-215ENST00000483021 SLC39A6Q13433 755 aa26.22■■□□□ 1.79
R3HDM1-215ENST00000483021 GAS2L2Q8NHY3 880 aa26.22■■□□□ 1.79
R3HDM1-215ENST00000483021 SRP68Q9UHB9 627 aaKnown RBP26.22■■□□□ 1.79
R3HDM1-215ENST00000483021 SIPA1L3O60292 1781 aaPredicted RBP26.22■■□□□ 1.79
R3HDM1-215ENST00000483021 VSIG10Q8N0Z9 540 aa26.21■■□□□ 1.79
R3HDM1-215ENST00000483021 ARFGEF1Q9Y6D6 1849 aa26.21■■□□□ 1.79
R3HDM1-215ENST00000483021 SOS1Q07889 1333 aaPredicted RBP26.2■■□□□ 1.79
R3HDM1-215ENST00000483021 CYP19A1P11511 503 aaPredicted RBP26.2■■□□□ 1.78
R3HDM1-215ENST00000483021 CFAP53Q96M91 514 aa26.2■■□□□ 1.78
R3HDM1-215ENST00000483021 GPBP1L1Q9HC44 474 aaPredicted RBP26.2■■□□□ 1.78
R3HDM1-215ENST00000483021 A0A0G2JLW4 131 aa26.19■■□□□ 1.78
R3HDM1-215ENST00000483021 FKBP8Q14318 412 aa26.19■■□□□ 1.78
R3HDM1-215ENST00000483021 BCS1LQ9Y276 419 aa26.19■■□□□ 1.78
R3HDM1-215ENST00000483021 ZPR1O75312 459 aa26.18■■□□□ 1.78
R3HDM1-215ENST00000483021 TTC5Q8N0Z6 440 aa26.18■■□□□ 1.78
R3HDM1-215ENST00000483021 COL15A1P39059 1388 aa26.18■■□□□ 1.78
R3HDM1-215ENST00000483021 GNAT3A8MTJ3 354 aa26.17■■□□□ 1.78
R3HDM1-215ENST00000483021 DPEP1P16444 411 aa26.17■■□□□ 1.78
R3HDM1-215ENST00000483021 TEFQ10587 303 aa26.16■■□□□ 1.78
R3HDM1-215ENST00000483021 DDR1Q08345 913 aa26.15■■□□□ 1.78
R3HDM1-215ENST00000483021 AFDNP55196 1824 aaKnown RBP26.14■■□□□ 1.78
R3HDM1-215ENST00000483021 USPL1Q5W0Q7 1092 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms