RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 CC2D1BQ5T0F9 858 aaKnown RBP13.2□□□□□ -0.3
TMEM39A-207ENST00000482162 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.19□□□□□ -0.3
TMEM39A-207ENST00000482162 ATP6V1AP38606 617 aa13.19□□□□□ -0.3
TMEM39A-207ENST00000482162 RC3H1Q5TC82 1133 aaKnown RBP13.19□□□□□ -0.3
TMEM39A-207ENST00000482162 ZNF831Q5JPB2 1677 aa13.18□□□□□ -0.3
TMEM39A-207ENST00000482162 DIAPH1O60610 1272 aaKnown RBP13.18□□□□□ -0.3
TMEM39A-207ENST00000482162 CABP4P57796 275 aa13.18□□□□□ -0.3
TMEM39A-207ENST00000482162 AKAP4Q5JQC9 854 aa13.18□□□□□ -0.3
TMEM39A-207ENST00000482162 C1orf141Q5JVX7 400 aa13.18□□□□□ -0.3
TMEM39A-207ENST00000482162 NFATC2IPQ8NCF5 419 aa13.18□□□□□ -0.3
TMEM39A-207ENST00000482162 AK7Q96M32 723 aa13.18□□□□□ -0.3
TMEM39A-207ENST00000482162 COL3A1P02461 1466 aaPredicted RBP13.17□□□□□ -0.3
TMEM39A-207ENST00000482162 UBR3Q6ZT12 1888 aa13.17□□□□□ -0.3
TMEM39A-207ENST00000482162 SMIM5Q71RC9 77 aa13.17□□□□□ -0.3
TMEM39A-207ENST00000482162 CD2APQ9Y5K6 639 aa13.17□□□□□ -0.3
TMEM39A-207ENST00000482162 CNTNAP4Q9C0A0 1308 aa13.16□□□□□ -0.3
TMEM39A-207ENST00000482162 MSH5O43196 834 aa13.16□□□□□ -0.3
TMEM39A-207ENST00000482162 HMOX1P09601 288 aa13.15□□□□□ -0.3
TMEM39A-207ENST00000482162 MTHFSDQ2M296 383 aaKnown RBP13.15□□□□□ -0.3
TMEM39A-207ENST00000482162 NLGN2Q8NFZ4 835 aa13.15□□□□□ -0.3
TMEM39A-207ENST00000482162 LGR6Q9HBX8 967 aa13.15□□□□□ -0.3
TMEM39A-207ENST00000482162 GNPATO15228 680 aa13.14□□□□□ -0.31
TMEM39A-207ENST00000482162 RPS6KA4O75676 772 aa13.14□□□□□ -0.31
TMEM39A-207ENST00000482162 ADRA2BP18089 450 aa13.14□□□□□ -0.31
TMEM39A-207ENST00000482162 MSL1Q68DK7 614 aa13.14□□□□□ -0.31
TMEM39A-207ENST00000482162 SLC52A2Q9HAB3 445 aa13.14□□□□□ -0.31
TMEM39A-207ENST00000482162 ADAMTS7Q9UKP4 1686 aa13.13□□□□□ -0.31
TMEM39A-207ENST00000482162 RNMTO43148 476 aaKnown RBP13.13□□□□□ -0.31
TMEM39A-207ENST00000482162 RBM42Q9BTD8 480 aaKnown RBP13.13□□□□□ -0.31
TMEM39A-207ENST00000482162 SCN11AQ9UI33 1791 aa13.12□□□□□ -0.31
TMEM39A-207ENST00000482162 MRC1P22897 1456 aa13.12□□□□□ -0.31
TMEM39A-207ENST00000482162 PHF14O94880 888 aa13.12□□□□□ -0.31
TMEM39A-207ENST00000482162 TRAPPC3LQ5T215 181 aa13.12□□□□□ -0.31
TMEM39A-207ENST00000482162 ARHGEF1Q92888 912 aaKnown RBP13.12□□□□□ -0.31
TMEM39A-207ENST00000482162 RTCBQ9Y3I0 505 aaKnown RBP13.12□□□□□ -0.31
TMEM39A-207ENST00000482162 MYH14Q7Z406 1995 aaKnown RBP13.11□□□□□ -0.31
TMEM39A-207ENST00000482162 CICQ96RK0 1608 aaPredicted RBP13.11□□□□□ -0.31
TMEM39A-207ENST00000482162 PTCD1O75127 700 aaKnown RBP13.11□□□□□ -0.31
TMEM39A-207ENST00000482162 PPP2R1AP30153 589 aa13.11□□□□□ -0.31
TMEM39A-207ENST00000482162 INTS5Q6P9B9 1019 aaKnown RBP13.11□□□□□ -0.31
TMEM39A-207ENST00000482162 NLGN1Q8N2Q7 840 aa13.11□□□□□ -0.31
TMEM39A-207ENST00000482162 COL5A3P25940 1745 aaPredicted RBP13.1□□□□□ -0.31
TMEM39A-207ENST00000482162 YBX3P16989 372 aaKnown RBP eCLIP13.1□□□□□ -0.31
TMEM39A-207ENST00000482162 GPR162Q16538 588 aa13.1□□□□□ -0.31
TMEM39A-207ENST00000482162 IL17REQ8NFR9 667 aa13.1□□□□□ -0.31
TMEM39A-207ENST00000482162 GYS1P13807 737 aa13.09□□□□□ -0.31
TMEM39A-207ENST00000482162 CRKLP46109 303 aaKnown RBP13.09□□□□□ -0.31
TMEM39A-207ENST00000482162 VSIG10Q8N0Z9 540 aa13.09□□□□□ -0.31
TMEM39A-207ENST00000482162 RSPH6AQ9H0K4 717 aa13.09□□□□□ -0.31
TMEM39A-207ENST00000482162 CHD4Q14839 1912 aa13.08□□□□□ -0.32
TMEM39A-207ENST00000482162 GRIN3BO60391 1043 aa13.08□□□□□ -0.32
TMEM39A-207ENST00000482162 CYP19A1P11511 503 aaPredicted RBP13.08□□□□□ -0.32
TMEM39A-207ENST00000482162 KLHL34Q8N239 644 aa13.08□□□□□ -0.32
TMEM39A-207ENST00000482162 ZNF784Q8NCA9 323 aaPredicted RBP13.08□□□□□ -0.32
TMEM39A-207ENST00000482162 GAS2L2Q8NHY3 880 aa13.08□□□□□ -0.32
TMEM39A-207ENST00000482162 PHACTR3Q96KR7 559 aa13.08□□□□□ -0.32
TMEM39A-207ENST00000482162 U2SURPO15042 1029 aaKnown RBP13.07□□□□□ -0.32
TMEM39A-207ENST00000482162 FCHSD2O94868 740 aa13.07□□□□□ -0.32
TMEM39A-207ENST00000482162 MMP10P09238 476 aa13.07□□□□□ -0.32
TMEM39A-207ENST00000482162 SLC39A6Q13433 755 aa13.07□□□□□ -0.32
TMEM39A-207ENST00000482162 DNAJC10Q8IXB1 793 aa13.07□□□□□ -0.32
TMEM39A-207ENST00000482162 CFAP53Q96M91 514 aa13.07□□□□□ -0.32
TMEM39A-207ENST00000482162 CEMIPQ8WUJ3 1361 aa13.07□□□□□ -0.32
TMEM39A-207ENST00000482162 UTRNP46939 3433 aa13.06□□□□□ -0.32
TMEM39A-207ENST00000482162 GNAT3A8MTJ3 354 aa13.06□□□□□ -0.32
TMEM39A-207ENST00000482162 RFC4P35249 363 aa13.06□□□□□ -0.32
TMEM39A-207ENST00000482162 KCPQ6ZWJ8 1503 aa13.06□□□□□ -0.32
TMEM39A-207ENST00000482162 TJP1Q07157 1748 aa13.05□□□□□ -0.32
TMEM39A-207ENST00000482162 CNGB1Q14028 1251 aaPredicted RBP13.05□□□□□ -0.32
TMEM39A-207ENST00000482162 CCDC87Q9NVE4 849 aa13.05□□□□□ -0.32
TMEM39A-207ENST00000482162 NUDCQ9Y266 331 aa13.05□□□□□ -0.32
TMEM39A-207ENST00000482162 SOS1Q07889 1333 aaPredicted RBP13.05□□□□□ -0.32
TMEM39A-207ENST00000482162 USP42Q9H9J4 1324 aaKnown RBP13.05□□□□□ -0.32
TMEM39A-207ENST00000482162 PRKAR2BP31323 418 aa13.04□□□□□ -0.32
TMEM39A-207ENST00000482162 TGFB2P61812 414 aa13.04□□□□□ -0.32
TMEM39A-207ENST00000482162 TM4SF1P30408 202 aa13.03□□□□□ -0.32
TMEM39A-207ENST00000482162 FKBP8Q14318 412 aa13.03□□□□□ -0.32
TMEM39A-207ENST00000482162 ZNF790Q6PG37 636 aa13.03□□□□□ -0.32
TMEM39A-207ENST00000482162 SRP68Q9UHB9 627 aaKnown RBP13.03□□□□□ -0.32
TMEM39A-207ENST00000482162 KIF13BQ9NQT8 1826 aa13.02□□□□□ -0.32
TMEM39A-207ENST00000482162 U2AF1L5P0DN76 240 aaPredicted RBP13.02□□□□□ -0.33
TMEM39A-207ENST00000482162 U2AF1Q01081 240 aaKnown RBP eCLIP13.02□□□□□ -0.33
TMEM39A-207ENST00000482162 ZNF496Q96IT1 587 aaPredicted RBP13.02□□□□□ -0.33
TMEM39A-207ENST00000482162 C10orf71Q711Q0 1435 aa13.02□□□□□ -0.33
TMEM39A-207ENST00000482162 UBR2Q8IWV8 1755 aa13.02□□□□□ -0.33
TMEM39A-207ENST00000482162 HTATSF1O43719 755 aaKnown RBP13.01□□□□□ -0.33
TMEM39A-207ENST00000482162 EIF5P55010 431 aaKnown RBP13.01□□□□□ -0.33
TMEM39A-207ENST00000482162 DDR1Q08345 913 aa13.01□□□□□ -0.33
TMEM39A-207ENST00000482162 TEFQ10587 303 aa13.01□□□□□ -0.33
TMEM39A-207ENST00000482162 PELP1Q8IZL8 1130 aaKnown RBP13.01□□□□□ -0.33
TMEM39A-207ENST00000482162 TEX13AQ9BXU3 409 aaPredicted RBP13.01□□□□□ -0.33
TMEM39A-207ENST00000482162 BCL2L12Q9HB09 334 aa13.01□□□□□ -0.33
TMEM39A-207ENST00000482162 NARFQ9UHQ1 456 aa13.01□□□□□ -0.33
TMEM39A-207ENST00000482162 ZBTB1Q9Y2K1 713 aa13.01□□□□□ -0.33
TMEM39A-207ENST00000482162 PXDNLA1KZ92 1463 aa13.01□□□□□ -0.33
TMEM39A-207ENST00000482162 C4AP0C0L4 1744 aa13.01□□□□□ -0.33
TMEM39A-207ENST00000482162 VIRMAQ69YN4 1812 aaKnown RBP13.01□□□□□ -0.33
TMEM39A-207ENST00000482162 SIPA1L3O60292 1781 aaPredicted RBP13□□□□□ -0.33
TMEM39A-207ENST00000482162 HEG1Q9ULI3 1381 aa13□□□□□ -0.33
TMEM39A-207ENST00000482162 STARD3NLO95772 234 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms