RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 HTRA3P83110 453 aa21.79■■□□□ 1.08
HDLBP-238ENST00000479894 LINC00116Q8NCU8 138 aa21.79■■□□□ 1.08
HDLBP-238ENST00000479894 PIGBQ92521 554 aa21.79■■□□□ 1.08
HDLBP-238ENST00000479894 SBF1O95248 1867 aa21.79■■□□□ 1.08
HDLBP-238ENST00000479894 NKX1-1Q15270 411 aaPredicted RBP21.78■■□□□ 1.08
HDLBP-238ENST00000479894 KDM2BQ8NHM5 1336 aa21.78■■□□□ 1.08
HDLBP-238ENST00000479894 INSRP06213 1382 aa21.77■■□□□ 1.08
HDLBP-238ENST00000479894 GNPATO15228 680 aa21.77■■□□□ 1.08
HDLBP-238ENST00000479894 CARD11Q9BXL7 1154 aa21.77■■□□□ 1.08
HDLBP-238ENST00000479894 C4AP0C0L4 1744 aa21.77■■□□□ 1.08
HDLBP-238ENST00000479894 KIF24Q5T7B8 1368 aa21.76■■□□□ 1.07
HDLBP-238ENST00000479894 A0A0G2JLW4 131 aa21.76■■□□□ 1.07
HDLBP-238ENST00000479894 RRS1Q15050 365 aaKnown RBP21.76■■□□□ 1.07
HDLBP-238ENST00000479894 NLGN1Q8N2Q7 840 aa21.76■■□□□ 1.07
HDLBP-238ENST00000479894 ZNF831Q5JPB2 1677 aa21.75■■□□□ 1.07
HDLBP-238ENST00000479894 FCHSD2O94868 740 aa21.75■■□□□ 1.07
HDLBP-238ENST00000479894 C9orf131Q5VYM1 1079 aa21.75■■□□□ 1.07
HDLBP-238ENST00000479894 KCPQ6ZWJ8 1503 aa21.74■■□□□ 1.07
HDLBP-238ENST00000479894 CCDC87Q9NVE4 849 aa21.73■■□□□ 1.07
HDLBP-238ENST00000479894 FLT4P35916 1363 aa21.73■■□□□ 1.07
HDLBP-238ENST00000479894 DPEP1P16444 411 aa21.72■■□□□ 1.07
HDLBP-238ENST00000479894 ATP6V1AP38606 617 aa21.72■■□□□ 1.07
HDLBP-238ENST00000479894 TMF1P82094 1093 aa21.72■■□□□ 1.07
HDLBP-238ENST00000479894 ITPK1Q13572 414 aa21.72■■□□□ 1.07
HDLBP-238ENST00000479894 NCAPD2Q15021 1401 aa21.72■■□□□ 1.07
HDLBP-238ENST00000479894 HSP90AB2PQ58FF8 381 aa21.71■■□□□ 1.07
HDLBP-238ENST00000479894 SMC1BQ8NDV3 1235 aa21.71■■□□□ 1.07
HDLBP-238ENST00000479894 ADRA2BP18089 450 aa21.7■■□□□ 1.06
HDLBP-238ENST00000479894 TRAPPC3LQ5T215 181 aa21.7■■□□□ 1.06
HDLBP-238ENST00000479894 TMOD3Q9NYL9 352 aa21.7■■□□□ 1.06
HDLBP-238ENST00000479894 RTCBQ9Y3I0 505 aaKnown RBP21.7■■□□□ 1.06
HDLBP-238ENST00000479894 KIF20BQ96Q89 1820 aa21.7■■□□□ 1.06
HDLBP-238ENST00000479894 COL5A3P25940 1745 aaPredicted RBP21.69■■□□□ 1.06
HDLBP-238ENST00000479894 SLC24A1O60721 1099 aa21.69■■□□□ 1.06
HDLBP-238ENST00000479894 SPG7Q9UQ90 795 aa21.69■■□□□ 1.06
HDLBP-238ENST00000479894 FYB1O15117 783 aa21.68■■□□□ 1.06
HDLBP-238ENST00000479894 KCNA3P22001 575 aa21.68■■□□□ 1.06
HDLBP-238ENST00000479894 DCAF5Q96JK2 942 aa21.68■■□□□ 1.06
HDLBP-238ENST00000479894 RRAGCQ9HB90 399 aa21.68■■□□□ 1.06
HDLBP-238ENST00000479894 ASAP1Q9ULH1 1129 aa21.68■■□□□ 1.06
HDLBP-238ENST00000479894 HSPA1AP0DMV8 641 aaKnown RBP21.67■■□□□ 1.06
HDLBP-238ENST00000479894 HSPA1BP0DMV9 641 aaKnown RBP21.67■■□□□ 1.06
HDLBP-238ENST00000479894 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.67■■□□□ 1.061e-15■□□□□ 9.5
HDLBP-238ENST00000479894 PIM2Q9P1W9 311 aa21.67■■□□□ 1.06
HDLBP-238ENST00000479894 PARP3Q9Y6F1 533 aa21.67■■□□□ 1.06
HDLBP-238ENST00000479894 ZC3H4Q9UPT8 1303 aaKnown RBP21.66■■□□□ 1.06
HDLBP-238ENST00000479894 RNF181Q9P0P0 153 aa21.66■■□□□ 1.06
HDLBP-238ENST00000479894 MYH14Q7Z406 1995 aaKnown RBP21.65■■□□□ 1.06
HDLBP-238ENST00000479894 KDRP35968 1356 aa21.65■■□□□ 1.06
HDLBP-238ENST00000479894 GYS1P13807 737 aa21.65■■□□□ 1.06
HDLBP-238ENST00000479894 RC3H1Q5TC82 1133 aaKnown RBP21.65■■□□□ 1.06
HDLBP-238ENST00000479894 GGNBP2Q9H3C7 697 aa21.65■■□□□ 1.06
HDLBP-238ENST00000479894 ARHGEF1Q92888 912 aaKnown RBP21.64■■□□□ 1.05
HDLBP-238ENST00000479894 TESK2Q96S53 571 aa21.64■■□□□ 1.05
HDLBP-238ENST00000479894 ATG3Q9NT62 314 aa21.64■■□□□ 1.05
HDLBP-238ENST00000479894 DALRD3Q5D0E6 543 aaKnown RBP21.63■■□□□ 1.05
HDLBP-238ENST00000479894 ANKRD26Q9UPS8 1709 aa21.63■■□□□ 1.05
HDLBP-238ENST00000479894 CNTNAP4Q9C0A0 1308 aa21.62■■□□□ 1.05
HDLBP-238ENST00000479894 CCDC88AQ3V6T2 1871 aa21.61■■□□□ 1.05
HDLBP-238ENST00000479894 RFC4P35249 363 aa21.61■■□□□ 1.05
HDLBP-238ENST00000479894 IFNL2Q8IZJ0 200 aa21.61■■□□□ 1.05
HDLBP-238ENST00000479894 RPS6KA4O75676 772 aa21.6■■□□□ 1.05
HDLBP-238ENST00000479894 ZEB1P37275 1124 aaPredicted RBP21.6■■□□□ 1.05
HDLBP-238ENST00000479894 PHKG2P15735 406 aa21.59■■□□□ 1.05
HDLBP-238ENST00000479894 KDM6AO15550 1401 aaPredicted RBP21.58■■□□□ 1.05
HDLBP-238ENST00000479894 SLC34A2O95436 690 aa21.57■■□□□ 1.04
HDLBP-238ENST00000479894 VEGFAP15692 232 aaPredicted RBP21.57■■□□□ 1.04
HDLBP-238ENST00000479894 SLC4A9Q96Q91 983 aa21.57■■□□□ 1.04
HDLBP-238ENST00000479894 ST20-MTHFSA0A0A6YYL1 179 aa21.55■■□□□ 1.04
HDLBP-238ENST00000479894 GLTPD2A6NH11 291 aa21.55■■□□□ 1.04
HDLBP-238ENST00000479894 TIAM2Q8IVF5 1701 aa21.55■■□□□ 1.04
HDLBP-238ENST00000479894 DLEC1Q9Y238 1755 aa21.54■■□□□ 1.04
HDLBP-238ENST00000479894 ERVV-2B6SEH9 535 aa21.53■■□□□ 1.04
HDLBP-238ENST00000479894 EYA1Q99502 592 aa21.53■■□□□ 1.04
HDLBP-238ENST00000479894 RBM42Q9BTD8 480 aaKnown RBP21.53■■□□□ 1.04
HDLBP-238ENST00000479894 EMILIN1Q9Y6C2 1016 aa21.53■■□□□ 1.04
HDLBP-238ENST00000479894 WASHC2AQ641Q2 1341 aa21.53■■□□□ 1.04
HDLBP-238ENST00000479894 DICER1Q9UPY3 1922 aaKnown RBP21.51■■□□□ 1.03
HDLBP-238ENST00000479894 LMNB1P20700 586 aa21.51■■□□□ 1.03
HDLBP-238ENST00000479894 USP42Q9H9J4 1324 aaKnown RBP21.51■■□□□ 1.03
HDLBP-238ENST00000479894 AFDNP55196 1824 aaKnown RBP21.5■■□□□ 1.03
HDLBP-238ENST00000479894 CHRNA5P30532 468 aa21.5■■□□□ 1.03
HDLBP-238ENST00000479894 DDR1Q08345 913 aa21.5■■□□□ 1.03
HDLBP-238ENST00000479894 HSP90AB1P08238 724 aaKnown RBP21.49■■□□□ 1.03
HDLBP-238ENST00000479894 ADAMTS7Q9UKP4 1686 aa21.49■■□□□ 1.03
HDLBP-238ENST00000479894 FKBP8Q14318 412 aa21.48■■□□□ 1.03
HDLBP-238ENST00000479894 NRXN2Q9P2S2 1712 aa21.47■■□□□ 1.03
HDLBP-238ENST00000479894 RASSF7Q02833 373 aa21.47■■□□□ 1.03
HDLBP-238ENST00000479894 POLRMTO00411 1230 aaKnown RBP21.46■■□□□ 1.03
HDLBP-238ENST00000479894 PRDM10Q9NQV6 1147 aa21.46■■□□□ 1.03
HDLBP-238ENST00000479894 CREBZFQ9NS37 354 aa21.46■■□□□ 1.03
HDLBP-238ENST00000479894 SRP68Q9UHB9 627 aaKnown RBP21.46■■□□□ 1.03
HDLBP-238ENST00000479894 TJP1Q07157 1748 aa21.46■■□□□ 1.03
HDLBP-238ENST00000479894 PPM1GO15355 546 aaPredicted RBP21.45■■□□□ 1.02
HDLBP-238ENST00000479894 TM4SF1P30408 202 aa21.45■■□□□ 1.02
HDLBP-238ENST00000479894 CRKLP46109 303 aaKnown RBP21.45■■□□□ 1.02
HDLBP-238ENST00000479894 POTECB2RU33 542 aa21.43■■□□□ 1.02
HDLBP-238ENST00000479894 CDCA8Q53HL2 280 aa21.42■■□□□ 1.02
HDLBP-238ENST00000479894 DPY19L2Q6NUT2 758 aa21.42■■□□□ 1.02
HDLBP-238ENST00000479894 CABP4P57796 275 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms