RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 TOMM70O94826 608 aa22.4■■□□□ 1.18
DDX56-210ENST00000479440 ASAP1Q9ULH1 1129 aa22.4■■□□□ 1.18
DDX56-210ENST00000479440 BCS1LQ9Y276 419 aa22.4■■□□□ 1.18
DDX56-210ENST00000479440 PLEKHG2Q9H7P9 1386 aa22.39■■□□□ 1.18
DDX56-210ENST00000479440 PPM1GO15355 546 aaPredicted RBP22.39■■□□□ 1.17
DDX56-210ENST00000479440 IFNL2Q8IZJ0 200 aa22.39■■□□□ 1.17
DDX56-210ENST00000479440 KDRP35968 1356 aa22.38■■□□□ 1.17
DDX56-210ENST00000479440 RTCBQ9Y3I0 505 aaKnown RBP22.38■■□□□ 1.17
DDX56-210ENST00000479440 WASHC2AQ641Q2 1341 aa22.37■■□□□ 1.17
DDX56-210ENST00000479440 ZNF831Q5JPB2 1677 aa22.37■■□□□ 1.17
DDX56-210ENST00000479440 PHKG2P15735 406 aa22.37■■□□□ 1.17
DDX56-210ENST00000479440 NLGN1Q8N2Q7 840 aa22.37■■□□□ 1.17
DDX56-210ENST00000479440 CCDC87Q9NVE4 849 aa22.37■■□□□ 1.17
DDX56-210ENST00000479440 N4BP2Q86UW6 1770 aaPredicted RBP22.37■■□□□ 1.17
DDX56-210ENST00000479440 C4AP0C0L4 1744 aa22.37■■□□□ 1.17
DDX56-210ENST00000479440 ADRA2BP18089 450 aa22.36■■□□□ 1.17
DDX56-210ENST00000479440 TRAPPC3LQ5T215 181 aa22.36■■□□□ 1.17
DDX56-210ENST00000479440 EYA1Q99502 592 aa22.35■■□□□ 1.17
DDX56-210ENST00000479440 ATG3Q9NT62 314 aa22.35■■□□□ 1.17
DDX56-210ENST00000479440 WDR90Q96KV7 1748 aa22.34■■□□□ 1.17
DDX56-210ENST00000479440 A0A0G2JLW4 131 aa22.33■■□□□ 1.17
DDX56-210ENST00000479440 ARHGAP27Q6ZUM4 889 aa22.33■■□□□ 1.17
DDX56-210ENST00000479440 CNTNAP4Q9C0A0 1308 aa22.32■■□□□ 1.16
DDX56-210ENST00000479440 COL5A3P25940 1745 aaPredicted RBP22.32■■□□□ 1.16
DDX56-210ENST00000479440 FCHSD2O94868 740 aa22.32■■□□□ 1.16
DDX56-210ENST00000479440 C16orf71Q8IYS4 520 aaPredicted RBP22.32■■□□□ 1.16
DDX56-210ENST00000479440 CARD14Q9BXL6 1004 aa22.32■■□□□ 1.16
DDX56-210ENST00000479440 PARP3Q9Y6F1 533 aa22.32■■□□□ 1.16
DDX56-210ENST00000479440 RBM46Q8TBY0 533 aaKnown RBP22.31■■□□□ 1.16
DDX56-210ENST00000479440 NMRK2Q9NPI5 230 aa22.31■■□□□ 1.16
DDX56-210ENST00000479440 BRCA1P38398 1863 aaKnown RBP22.3■■□□□ 1.16
DDX56-210ENST00000479440 HSP90AB1P08238 724 aaKnown RBP22.3■■□□□ 1.16
DDX56-210ENST00000479440 RFC4P35249 363 aa22.3■■□□□ 1.16
DDX56-210ENST00000479440 RC3H1Q5TC82 1133 aaKnown RBP22.3■■□□□ 1.16
DDX56-210ENST00000479440 DNAJC5GQ8N7S2 189 aa22.3■■□□□ 1.16
DDX56-210ENST00000479440 RBM42Q9BTD8 480 aaKnown RBP22.3■■□□□ 1.16
DDX56-210ENST00000479440 GYS1P13807 737 aa22.29■■□□□ 1.16
DDX56-210ENST00000479440 DPEP1P16444 411 aa22.29■■□□□ 1.16
DDX56-210ENST00000479440 ARHGEF1Q92888 912 aaKnown RBP22.29■■□□□ 1.16
DDX56-210ENST00000479440 ERVV-2B6SEH9 535 aa22.28■■□□□ 1.16
DDX56-210ENST00000479440 ARFGEF1Q9Y6D6 1849 aa22.28■■□□□ 1.16
DDX56-210ENST00000479440 C9orf131Q5VYM1 1079 aa22.27■■□□□ 1.16
DDX56-210ENST00000479440 RPS6KA4O75676 772 aa22.26■■□□□ 1.15
DDX56-210ENST00000479440 FSTL1Q12841 308 aa22.26■■□□□ 1.15
DDX56-210ENST00000479440 DCAF5Q96JK2 942 aa22.26■■□□□ 1.15
DDX56-210ENST00000479440 POLKQ9UBT6 870 aa22.26■■□□□ 1.15
DDX56-210ENST00000479440 KDM2BQ8NHM5 1336 aa22.26■■□□□ 1.15
DDX56-210ENST00000479440 EIF4A2Q14240 407 aaKnown RBP22.25■■□□□ 1.15
DDX56-210ENST00000479440 SLC4A9Q96Q91 983 aa22.25■■□□□ 1.15
DDX56-210ENST00000479440 PIM2Q9P1W9 311 aa22.24■■□□□ 1.15
DDX56-210ENST00000479440 KCPQ6ZWJ8 1503 aa22.24■■□□□ 1.15
DDX56-210ENST00000479440 TNRC6CQ9HCJ0 1690 aaKnown RBP22.23■■□□□ 1.15
DDX56-210ENST00000479440 KLRG1Q96E93 195 aa22.23■■□□□ 1.15
DDX56-210ENST00000479440 KDM6AO15550 1401 aaPredicted RBP22.23■■□□□ 1.15
DDX56-210ENST00000479440 CABP4P57796 275 aa22.21■■□□□ 1.15
DDX56-210ENST00000479440 PLEKHO1Q53GL0 409 aaPredicted RBP22.21■■□□□ 1.15
DDX56-210ENST00000479440 DALRD3Q5D0E6 543 aaKnown RBP22.21■■□□□ 1.15
DDX56-210ENST00000479440 RNF181Q9P0P0 153 aa22.21■■□□□ 1.15
DDX56-210ENST00000479440 KCNA3P22001 575 aa22.2■■□□□ 1.14
DDX56-210ENST00000479440 JMYQ8N9B5 988 aa22.2■■□□□ 1.14
DDX56-210ENST00000479440 AMOTQ4VCS5 1084 aa22.19■■□□□ 1.14
DDX56-210ENST00000479440 ZNF530Q6P9A1 599 aaPredicted RBP22.19■■□□□ 1.14
DDX56-210ENST00000479440 USP42Q9H9J4 1324 aaKnown RBP22.19■■□□□ 1.14
DDX56-210ENST00000479440 TNNT2P45379 298 aaPredicted RBP22.17■■□□□ 1.14
DDX56-210ENST00000479440 CRKLP46109 303 aaKnown RBP22.17■■□□□ 1.14
DDX56-210ENST00000479440 C1orf141Q5JVX7 400 aa22.17■■□□□ 1.14
DDX56-210ENST00000479440 TJP1Q07157 1748 aa22.17■■□□□ 1.14
DDX56-210ENST00000479440 ZC3H4Q9UPT8 1303 aaKnown RBP22.16■■□□□ 1.14
DDX56-210ENST00000479440 HTRA3P83110 453 aa22.16■■□□□ 1.14
DDX56-210ENST00000479440 SRP68Q9UHB9 627 aaKnown RBP22.16■■□□□ 1.14
DDX56-210ENST00000479440 PTCD1O75127 700 aaKnown RBP22.15■■□□□ 1.14
DDX56-210ENST00000479440 DDR1Q08345 913 aa22.15■■□□□ 1.14
DDX56-210ENST00000479440 FKBP8Q14318 412 aa22.15■■□□□ 1.14
DDX56-210ENST00000479440 SMC1BQ8NDV3 1235 aa22.15■■□□□ 1.14
DDX56-210ENST00000479440 MYH14Q7Z406 1995 aaKnown RBP22.15■■□□□ 1.14
DDX56-210ENST00000479440 MTHFSP49914 203 aa22.14■■□□□ 1.13
DDX56-210ENST00000479440 RRAGCQ9HB90 399 aa22.14■■□□□ 1.13
DDX56-210ENST00000479440 COL13A1Q5TAT6 717 aaPredicted RBP22.13■■□□□ 1.13
DDX56-210ENST00000479440 CHRNA5P30532 468 aa22.12■■□□□ 1.13
DDX56-210ENST00000479440 POLRMTO00411 1230 aaKnown RBP22.11■■□□□ 1.13
DDX56-210ENST00000479440 POLR3GLQ9BT43 218 aa22.1■■□□□ 1.13
DDX56-210ENST00000479440 ADAMTS7Q9UKP4 1686 aa22.1■■□□□ 1.13
DDX56-210ENST00000479440 ZPR1O75312 459 aa22.09■■□□□ 1.13
DDX56-210ENST00000479440 TNS4Q8IZW8 715 aa22.09■■□□□ 1.13
DDX56-210ENST00000479440 NFATC2IPQ8NCF5 419 aa22.09■■□□□ 1.13
DDX56-210ENST00000479440 SBF1O95248 1867 aa22.07■■□□□ 1.12
DDX56-210ENST00000479440 RASSF7Q02833 373 aa22.07■■□□□ 1.12
DDX56-210ENST00000479440 USPL1Q5W0Q7 1092 aa22.07■■□□□ 1.12
DDX56-210ENST00000479440 TIAM2Q8IVF5 1701 aa22.06■■□□□ 1.12
DDX56-210ENST00000479440 CAPN15O75808 1086 aa22.06■■□□□ 1.12
DDX56-210ENST00000479440 LMNB1P20700 586 aa22.06■■□□□ 1.12
DDX56-210ENST00000479440 TM4SF1P30408 202 aa22.06■■□□□ 1.12
DDX56-210ENST00000479440 INTS5Q6P9B9 1019 aaKnown RBP22.06■■□□□ 1.12
DDX56-210ENST00000479440 DLEC1Q9Y238 1755 aa22.06■■□□□ 1.12
DDX56-210ENST00000479440 SOS1Q07889 1333 aaPredicted RBP22.06■■□□□ 1.12
DDX56-210ENST00000479440 SCN11AQ9UI33 1791 aa22.05■■□□□ 1.12
DDX56-210ENST00000479440 AEBP1Q8IUX7 1158 aa22.05■■□□□ 1.12
DDX56-210ENST00000479440 NRXN2Q9P2S2 1712 aa22.05■■□□□ 1.12
DDX56-210ENST00000479440 MRC1P22897 1456 aa22.04■■□□□ 1.12
DDX56-210ENST00000479440 COL15A1P39059 1388 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms