RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 NLGN1Q8N2Q7 840 aa20.26■□□□□ 0.83
USP11-207ENST00000478596 DCAF5Q96JK2 942 aa20.26■□□□□ 0.83
USP11-207ENST00000478596 CCDC87Q9NVE4 849 aa20.26■□□□□ 0.83
USP11-207ENST00000478596 ROCK2O75116 1388 aaKnown RBP20.25■□□□□ 0.83
USP11-207ENST00000478596 PIGBQ92521 554 aa20.25■□□□□ 0.83
USP11-207ENST00000478596 TATP17735 454 aaPredicted RBP20.24■□□□□ 0.83
USP11-207ENST00000478596 ZC3H4Q9UPT8 1303 aaKnown RBP20.24■□□□□ 0.83
USP11-207ENST00000478596 RTL1A6NKG5 1358 aa20.23■□□□□ 0.83
USP11-207ENST00000478596 CYP27B1O15528 508 aa20.23■□□□□ 0.83
USP11-207ENST00000478596 BRCA1P38398 1863 aaKnown RBP20.23■□□□□ 0.83
USP11-207ENST00000478596 TMF1P82094 1093 aa20.23■□□□□ 0.83
USP11-207ENST00000478596 TMC1Q8TDI8 760 aa20.23■□□□□ 0.83
USP11-207ENST00000478596 SLC12A5Q9H2X9 1139 aa20.23■□□□□ 0.83
USP11-207ENST00000478596 TERF2IPQ9NYB0 399 aa20.23■□□□□ 0.83
USP11-207ENST00000478596 PIM2Q9P1W9 311 aa20.23■□□□□ 0.83
USP11-207ENST00000478596 RGPD2P0DJD1 1756 aa20.23■□□□□ 0.83
USP11-207ENST00000478596 A0A1W2PP64 1363 aa20.22■□□□□ 0.83
USP11-207ENST00000478596 USHBP1Q8N6Y0 703 aa20.22■□□□□ 0.83
USP11-207ENST00000478596 PRDM10Q9NQV6 1147 aa20.22■□□□□ 0.83
USP11-207ENST00000478596 MAP2P11137 1827 aaKnown RBP20.22■□□□□ 0.83
USP11-207ENST00000478596 ARFGEF1Q9Y6D6 1849 aa20.22■□□□□ 0.83
USP11-207ENST00000478596 VEGFAP15692 232 aaPredicted RBP20.21■□□□□ 0.83
USP11-207ENST00000478596 ITPK1Q13572 414 aa20.21■□□□□ 0.83
USP11-207ENST00000478596 DALRD3Q5D0E6 543 aaKnown RBP20.2■□□□□ 0.82
USP11-207ENST00000478596 COG3Q96JB2 828 aa20.2■□□□□ 0.82
USP11-207ENST00000478596 TRAPPC3LQ5T215 181 aa20.19■□□□□ 0.82
USP11-207ENST00000478596 C4AP0C0L4 1744 aa20.19■□□□□ 0.82
USP11-207ENST00000478596 FBLN1P23142 703 aa20.18■□□□□ 0.82
USP11-207ENST00000478596 NKX1-1Q15270 411 aaPredicted RBP20.18■□□□□ 0.82
USP11-207ENST00000478596 PARP3Q9Y6F1 533 aa20.18■□□□□ 0.82
USP11-207ENST00000478596 SMG6Q86US8 1419 aaKnown RBP20.18■□□□□ 0.82
USP11-207ENST00000478596 ATP6V1AP38606 617 aa20.17■□□□□ 0.82
USP11-207ENST00000478596 RTCBQ9Y3I0 505 aaKnown RBP20.17■□□□□ 0.82
USP11-207ENST00000478596 ITGB4P16144 1822 aa20.16■□□□□ 0.82
USP11-207ENST00000478596 GLTPD2A6NH11 291 aa20.16■□□□□ 0.82
USP11-207ENST00000478596 FOXN1O15353 648 aa20.16■□□□□ 0.82
USP11-207ENST00000478596 GYS1P13807 737 aa20.16■□□□□ 0.82
USP11-207ENST00000478596 ADRA2BP18089 450 aa20.16■□□□□ 0.82
USP11-207ENST00000478596 FAM161AQ3B820 660 aa20.16■□□□□ 0.82
USP11-207ENST00000478596 KDM6AO15550 1401 aaPredicted RBP20.16■□□□□ 0.82
USP11-207ENST00000478596 CARD11Q9BXL7 1154 aa20.15■□□□□ 0.82
USP11-207ENST00000478596 ARHGEF1Q92888 912 aaKnown RBP20.14■□□□□ 0.81
USP11-207ENST00000478596 CREBZFQ9NS37 354 aa20.14■□□□□ 0.81
USP11-207ENST00000478596 ASAP1Q9ULH1 1129 aa20.14■□□□□ 0.81
USP11-207ENST00000478596 PUS7Q96PZ0 661 aaKnown RBP20.13■□□□□ 0.81
USP11-207ENST00000478596 TMOD3Q9NYL9 352 aa20.12■□□□□ 0.81
USP11-207ENST00000478596 CTCFP49711 727 aaPredicted RBP20.11■□□□□ 0.81
USP11-207ENST00000478596 RRS1Q15050 365 aaKnown RBP20.11■□□□□ 0.81
USP11-207ENST00000478596 RC3H1Q5TC82 1133 aaKnown RBP20.11■□□□□ 0.81
USP11-207ENST00000478596 INSRP06213 1382 aa20.1■□□□□ 0.81
USP11-207ENST00000478596 SBF1O95248 1867 aa20.1■□□□□ 0.81
USP11-207ENST00000478596 LMNB1P20700 586 aa20.1■□□□□ 0.81
USP11-207ENST00000478596 RFC4P35249 363 aa20.1■□□□□ 0.81
USP11-207ENST00000478596 MKRN1Q9UHC7 482 aaKnown RBP20.1■□□□□ 0.81
USP11-207ENST00000478596 KDRP35968 1356 aa20.09■□□□□ 0.81
USP11-207ENST00000478596 ATG3Q9NT62 314 aa20.09■□□□□ 0.81
USP11-207ENST00000478596 POTECB2RU33 542 aa20.08■□□□□ 0.81
USP11-207ENST00000478596 ABHD8Q96I13 439 aa20.08■□□□□ 0.81
USP11-207ENST00000478596 CNTNAP4Q9C0A0 1308 aa20.07■□□□□ 0.8
USP11-207ENST00000478596 RPS6KA4O75676 772 aa20.07■□□□□ 0.8
USP11-207ENST00000478596 CHRNA5P30532 468 aa20.07■□□□□ 0.8
USP11-207ENST00000478596 RASSF7Q02833 373 aa20.07■□□□□ 0.8
USP11-207ENST00000478596 HSP90AB2PQ58FF8 381 aa20.07■□□□□ 0.8
USP11-207ENST00000478596 AIDAQ96BJ3 306 aa20.07■□□□□ 0.8
USP11-207ENST00000478596 CNTNAP1P78357 1384 aa20.07■□□□□ 0.8
USP11-207ENST00000478596 SPG7Q9UQ90 795 aa20.06■□□□□ 0.8
USP11-207ENST00000478596 KIF24Q5T7B8 1368 aa20.06■□□□□ 0.8
USP11-207ENST00000478596 SLC4A9Q96Q91 983 aa20.05■□□□□ 0.8
USP11-207ENST00000478596 NCAPD2Q15021 1401 aa20.04■□□□□ 0.8
USP11-207ENST00000478596 RGS19P49795 217 aa20.04■□□□□ 0.8
USP11-207ENST00000478596 MLLT1Q03111 559 aaPredicted RBP20.04■□□□□ 0.8
USP11-207ENST00000478596 DDR1Q08345 913 aa20.04■□□□□ 0.8
USP11-207ENST00000478596 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.04■□□□□ 0.8
USP11-207ENST00000478596 FLT4P35916 1363 aa20.04■□□□□ 0.8
USP11-207ENST00000478596 ZNF831Q5JPB2 1677 aa20.03■□□□□ 0.8
USP11-207ENST00000478596 CHADLQ6NUI6 762 aa20.03■□□□□ 0.8
USP11-207ENST00000478596 LBX1P52954 281 aa20.02■□□□□ 0.8
USP11-207ENST00000478596 WBP1LQ9NX94 342 aa20.02■□□□□ 0.8
USP11-207ENST00000478596 EIF4G2P78344 907 aaKnown RBP eCLIP20.01■□□□□ 0.79
USP11-207ENST00000478596 FKBP8Q14318 412 aa20.01■□□□□ 0.79
USP11-207ENST00000478596 DPY19L2Q6NUT2 758 aa20■□□□□ 0.79
USP11-207ENST00000478596 FYB1O15117 783 aa19.99■□□□□ 0.79
USP11-207ENST00000478596 PHKG2P15735 406 aa19.99■□□□□ 0.79
USP11-207ENST00000478596 IFNL2Q8IZJ0 200 aa19.99■□□□□ 0.79
USP11-207ENST00000478596 USP42Q9H9J4 1324 aaKnown RBP19.99■□□□□ 0.79
USP11-207ENST00000478596 POLRMTO00411 1230 aaKnown RBP19.98■□□□□ 0.79
USP11-207ENST00000478596 VEGFBP49765 207 aa19.98■□□□□ 0.79
USP11-207ENST00000478596 COL5A3P25940 1745 aaPredicted RBP19.98■□□□□ 0.79
USP11-207ENST00000478596 TIAM2Q8IVF5 1701 aa19.97■□□□□ 0.79
USP11-207ENST00000478596 RBM42Q9BTD8 480 aaKnown RBP19.97■□□□□ 0.79
USP11-207ENST00000478596 GGNBP2Q9H3C7 697 aa19.97■□□□□ 0.79
USP11-207ENST00000478596 SRP68Q9UHB9 627 aaKnown RBP19.97■□□□□ 0.79
USP11-207ENST00000478596 PASKQ96RG2 1323 aa19.97■□□□□ 0.79
USP11-207ENST00000478596 NFKBIEO00221 500 aa19.96■□□□□ 0.79
USP11-207ENST00000478596 TM4SF1P30408 202 aa19.96■□□□□ 0.79
USP11-207ENST00000478596 HSPA5P11021 654 aaKnown RBP19.95■□□□□ 0.78
USP11-207ENST00000478596 HSPA8P11142 646 aaKnown RBP19.95■□□□□ 0.78
USP11-207ENST00000478596 TTLL6Q8N841 843 aa19.94■□□□□ 0.78
USP11-207ENST00000478596 ST20-MTHFSA0A0A6YYL1 179 aa19.93■□□□□ 0.78
USP11-207ENST00000478596 ERVV-2B6SEH9 535 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms