RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 ATP13A2Q9NQ11 1180 aa7.51□□□□□ -1.21
SMARCA1-204ENST00000478420 IL2RAP01589 272 aa7.5□□□□□ -1.21
SMARCA1-204ENST00000478420 CSB-PGBD3P0DP91 1061 aa7.5□□□□□ -1.21
SMARCA1-204ENST00000478420 XAGE2Q96GT9 111 aa7.5□□□□□ -1.21
SMARCA1-204ENST00000478420 ZFP42Q96MM3 310 aa7.5□□□□□ -1.21
SMARCA1-204ENST00000478420 INSM2Q96T92 566 aaPredicted RBP7.5□□□□□ -1.21
SMARCA1-204ENST00000478420 POLMQ9NP87 494 aaPredicted RBP7.5□□□□□ -1.21
SMARCA1-204ENST00000478420 ZNF358Q9NW07 568 aa7.5□□□□□ -1.21
SMARCA1-204ENST00000478420 SFI1A8K8P3 1242 aa7.49□□□□□ -1.21
SMARCA1-204ENST00000478420 DKK1O94907 266 aa7.49□□□□□ -1.21
SMARCA1-204ENST00000478420 ARXQ96QS3 562 aa7.49□□□□□ -1.21
SMARCA1-204ENST00000478420 SERTAD1Q9UHV2 236 aa7.49□□□□□ -1.21
SMARCA1-204ENST00000478420 DACH1Q9UI36 760 aa7.49□□□□□ -1.21
SMARCA1-204ENST00000478420 ZMIZ1Q9ULJ6 1067 aa7.49□□□□□ -1.21
SMARCA1-204ENST00000478420 M0R2N6 131 aa7.48□□□□□ -1.21
SMARCA1-204ENST00000478420 STK32AQ8WU08 396 aa7.48□□□□□ -1.21
SMARCA1-204ENST00000478420 SLC4A9Q96Q91 983 aa7.48□□□□□ -1.21
SMARCA1-204ENST00000478420 GPC1P35052 558 aa7.47□□□□□ -1.21
SMARCA1-204ENST00000478420 CTSOP43234 321 aaPredicted RBP7.47□□□□□ -1.21
SMARCA1-204ENST00000478420 RNF144AP50876 292 aaPredicted RBP7.47□□□□□ -1.21
SMARCA1-204ENST00000478420 CENPCQ03188 943 aa7.47□□□□□ -1.21
SMARCA1-204ENST00000478420 TLR1Q15399 786 aa7.47□□□□□ -1.21
SMARCA1-204ENST00000478420 SLC27A3Q5K4L6 730 aa7.47□□□□□ -1.21
SMARCA1-204ENST00000478420 SENP2Q9HC62 589 aa7.47□□□□□ -1.21
SMARCA1-204ENST00000478420 HRH3Q9Y5N1 445 aa7.47□□□□□ -1.21
SMARCA1-204ENST00000478420 A6NJY4 79 aa7.46□□□□□ -1.22
SMARCA1-204ENST00000478420 TTLL8A6PVC2 850 aa7.46□□□□□ -1.22
SMARCA1-204ENST00000478420 GTF2E1P29083 439 aaPredicted RBP7.46□□□□□ -1.22
SMARCA1-204ENST00000478420 SMTNP53814 917 aa7.46□□□□□ -1.22
SMARCA1-204ENST00000478420 TMEM164Q5U3C3 297 aa7.46□□□□□ -1.22
SMARCA1-204ENST00000478420 TSEN2Q8NCE0 465 aaKnown RBP7.46□□□□□ -1.22
SMARCA1-204ENST00000478420 ZSCAN10Q96SZ4 725 aaPredicted RBP7.46□□□□□ -1.22
SMARCA1-204ENST00000478420 HINFPQ9BQA5 517 aa7.46□□□□□ -1.22
SMARCA1-204ENST00000478420 PDE4CQ08493 712 aa7.45□□□□□ -1.22
SMARCA1-204ENST00000478420 SWI5Q1ZZU3 235 aa7.45□□□□□ -1.22
SMARCA1-204ENST00000478420 FOXD4L5Q5VV16 416 aaPredicted RBP7.45□□□□□ -1.22
SMARCA1-204ENST00000478420 TNS4Q8IZW8 715 aa7.45□□□□□ -1.22
SMARCA1-204ENST00000478420 RETREG2Q8NC44 543 aa7.45□□□□□ -1.22
SMARCA1-204ENST00000478420 KIFC2Q96AC6 838 aa7.45□□□□□ -1.22
SMARCA1-204ENST00000478420 USTQ9Y2C2 406 aa7.45□□□□□ -1.22
SMARCA1-204ENST00000478420 SOS2Q07890 1332 aaPredicted RBP7.45□□□□□ -1.22
SMARCA1-204ENST00000478420 MTFR1Q15390 333 aa7.44□□□□□ -1.22
SMARCA1-204ENST00000478420 TMEM214Q6NUQ4 689 aaKnown RBP7.44□□□□□ -1.22
SMARCA1-204ENST00000478420 RNF217Q8TC41 542 aa7.44□□□□□ -1.22
SMARCA1-204ENST00000478420 FHDC1Q9C0D6 1143 aaPredicted RBP7.44□□□□□ -1.22
SMARCA1-204ENST00000478420 GRIP2Q9C0E4 1043 aa7.44□□□□□ -1.22
SMARCA1-204ENST00000478420 SCHIP1Q9P0W5 487 aaPredicted RBP7.44□□□□□ -1.22
SMARCA1-204ENST00000478420 GMPR2Q9P2T1 348 aaKnown RBP7.44□□□□□ -1.22
SMARCA1-204ENST00000478420 FIGNL2A6NMB9 653 aa7.43□□□□□ -1.22
SMARCA1-204ENST00000478420 MAN1A2O60476 641 aa7.43□□□□□ -1.22
SMARCA1-204ENST00000478420 EPHA4P54764 986 aa7.43□□□□□ -1.22
SMARCA1-204ENST00000478420 LYSMD3Q7Z3D4 306 aa7.43□□□□□ -1.22
SMARCA1-204ENST00000478420 NBPF15Q8N660 670 aa7.43□□□□□ -1.22
SMARCA1-204ENST00000478420 TRIM47Q96LD4 638 aa7.43□□□□□ -1.22
SMARCA1-204ENST00000478420 TMEM88BA6NKF7 163 aa7.42□□□□□ -1.22
SMARCA1-204ENST00000478420 CDK2AP1O14519 115 aa7.42□□□□□ -1.22
SMARCA1-204ENST00000478420 FAM69CQ0P6D2 419 aa7.42□□□□□ -1.22
SMARCA1-204ENST00000478420 GNASQ5JWF2 1037 aa7.42□□□□□ -1.22
SMARCA1-204ENST00000478420 PRICKLE2Q7Z3G6 844 aa7.42□□□□□ -1.22
SMARCA1-204ENST00000478420 PPARGC1BQ86YN6 1023 aaKnown RBP7.42□□□□□ -1.22
SMARCA1-204ENST00000478420 DNMT3LQ9UJW3 386 aa7.42□□□□□ -1.22
SMARCA1-204ENST00000478420 C11orf95C9JLR9 678 aaPredicted RBP7.41□□□□□ -1.22
SMARCA1-204ENST00000478420 LGR5O75473 907 aa7.41□□□□□ -1.22
SMARCA1-204ENST00000478420 FOXK2Q01167 660 aa7.41□□□□□ -1.22
SMARCA1-204ENST00000478420 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.41□□□□□ -1.221e-9■■■■□ 19.5
SMARCA1-204ENST00000478420 SLC9A9Q8IVB4 645 aa7.41□□□□□ -1.22
SMARCA1-204ENST00000478420 RHBDD1Q8TEB9 315 aa7.41□□□□□ -1.22
SMARCA1-204ENST00000478420 CLP1Q92989 425 aaKnown RBP7.41□□□□□ -1.22
SMARCA1-204ENST00000478420 TSPAN10Q9H1Z9 355 aaPredicted RBP7.41□□□□□ -1.22
SMARCA1-204ENST00000478420 IQSEC3Q9UPP2 1182 aaPredicted RBP7.41□□□□□ -1.22
SMARCA1-204ENST00000478420 SPATA31C2B4DYI2 1134 aa7.4□□□□□ -1.22
SMARCA1-204ENST00000478420 ZNF787Q6DD87 383 aa7.4□□□□□ -1.22
SMARCA1-204ENST00000478420 TAS1R3Q7RTX0 852 aa7.4□□□□□ -1.22
SMARCA1-204ENST00000478420 GAS2L2Q8NHY3 880 aa7.4□□□□□ -1.22
SMARCA1-204ENST00000478420 SCG3Q8WXD2 468 aaKnown RBP7.4□□□□□ -1.22
SMARCA1-204ENST00000478420 NIFKQ9BYG3 293 aaKnown RBP7.4□□□□□ -1.22
SMARCA1-204ENST00000478420 CABP1Q9NZU7 370 aa7.4□□□□□ -1.22
SMARCA1-204ENST00000478420 ATAD2Q6PL18 1390 aa7.4□□□□□ -1.22
SMARCA1-204ENST00000478420 PPP1R12BO60237 982 aaPredicted RBP7.39□□□□□ -1.23
SMARCA1-204ENST00000478420 PRMT3O60678 531 aa7.39□□□□□ -1.23
SMARCA1-204ENST00000478420 IGFBP4P22692 258 aa7.39□□□□□ -1.23
SMARCA1-204ENST00000478420 POU4F2Q12837 409 aa7.39□□□□□ -1.23
SMARCA1-204ENST00000478420 TBCELQ5QJ74 424 aa7.39□□□□□ -1.23
SMARCA1-204ENST00000478420 HOMEZQ8IX15 550 aa7.39□□□□□ -1.23
SMARCA1-204ENST00000478420 CHMP3Q9Y3E7 222 aa7.39□□□□□ -1.23
SMARCA1-204ENST00000478420 USP3Q9Y6I4 520 aa7.39□□□□□ -1.23
SMARCA1-204ENST00000478420 CARNS1A5YM72 827 aa7.38□□□□□ -1.23
SMARCA1-204ENST00000478420 SOBPA7XYQ1 873 aa7.38□□□□□ -1.23
SMARCA1-204ENST00000478420 SNRPBP14678 240 aaKnown RBP7.38□□□□□ -1.23
SMARCA1-204ENST00000478420 RHOQP17081 205 aa7.38□□□□□ -1.23
SMARCA1-204ENST00000478420 WEE1P30291 646 aa7.38□□□□□ -1.23
SMARCA1-204ENST00000478420 PSMA6P60900 246 aaKnown RBP7.38□□□□□ -1.23
SMARCA1-204ENST00000478420 C4orf17Q53FE4 359 aa7.38□□□□□ -1.23
SMARCA1-204ENST00000478420 WDR44Q5JSH3 913 aa7.38□□□□□ -1.23
SMARCA1-204ENST00000478420 NBPF10Q6P3W6 841 aaKnown RBP7.38□□□□□ -1.23
SMARCA1-204ENST00000478420 CHMP7Q8WUX9 453 aaPredicted RBP7.38□□□□□ -1.23
SMARCA1-204ENST00000478420 PRIMPOLQ96LW4 560 aa7.38□□□□□ -1.23
SMARCA1-204ENST00000478420 C21orf2O43822 256 aa7.37□□□□□ -1.23
SMARCA1-204ENST00000478420 ATP2B4P23634 1241 aa7.37□□□□□ -1.23
SMARCA1-204ENST00000478420 PHKA2P46019 1235 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms