RNA–Protein interactions for RNA: ENST00000478389.5

NELFCD-206, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 3,581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-206ENST00000478389 GCC1Q96CN9 775 aa10.11□□□□□ -0.79
NELFCD-206ENST00000478389 REREQ9P2R6 1566 aa10.11□□□□□ -0.79
NELFCD-206ENST00000478389 U2AF1L5P0DN76 240 aaPredicted RBP10.11□□□□□ -0.79
NELFCD-206ENST00000478389 U2AF1Q01081 240 aaKnown RBP eCLIP10.11□□□□□ -0.79
NELFCD-206ENST00000478389 KRT222Q8N1A0 295 aa10.11□□□□□ -0.79
NELFCD-206ENST00000478389 RBM42Q9BTD8 480 aaKnown RBP10.11□□□□□ -0.79
NELFCD-206ENST00000478389 TCP11L2Q8N4U5 519 aa10.11□□□□□ -0.79
NELFCD-206ENST00000478389 CFAP74Q9C0B2 1584 aa10.1□□□□□ -0.79
NELFCD-206ENST00000478389 FAM177BA6PVY3 158 aa10.1□□□□□ -0.79
NELFCD-206ENST00000478389 U2SURPO15042 1029 aaKnown RBP10.1□□□□□ -0.79
NELFCD-206ENST00000478389 SLFN14P0C7P3 912 aa10.1□□□□□ -0.79
NELFCD-206ENST00000478389 DDX41Q9UJV9 622 aaKnown RBP10.1□□□□□ -0.79
NELFCD-206ENST00000478389 ATP10AO60312 1499 aa10.1□□□□□ -0.79
NELFCD-206ENST00000478389 ATF7IPQ6VMQ6 1270 aa10.1□□□□□ -0.79
NELFCD-206ENST00000478389 TTC12Q9H892 705 aaPredicted RBP10.1□□□□□ -0.79
NELFCD-206ENST00000478389 ABCC1P33527 1531 aa10.1□□□□□ -0.79
NELFCD-206ENST00000478389 UNC13BO14795 1591 aa10.1□□□□□ -0.79
NELFCD-206ENST00000478389 TERF2Q15554 542 aa10.1□□□□□ -0.79
NELFCD-206ENST00000478389 CTNNA3Q9UI47 895 aa10.1□□□□□ -0.79
NELFCD-206ENST00000478389 ZFYVE16Q7Z3T8 1539 aa10.09□□□□□ -0.79
NELFCD-206ENST00000478389 ANKRD36BQ8N2N9 1353 aa10.09□□□□□ -0.79
NELFCD-206ENST00000478389 SH3BP5O60239 455 aa10.09□□□□□ -0.79
NELFCD-206ENST00000478389 PPFIA4O75335 1185 aa10.09□□□□□ -0.79
NELFCD-206ENST00000478389 ADCY5O95622 1261 aa10.09□□□□□ -0.79
NELFCD-206ENST00000478389 RHBDL3P58872 404 aa10.09□□□□□ -0.79
NELFCD-206ENST00000478389 ZFYVE27Q5T4F4 411 aa10.09□□□□□ -0.79
NELFCD-206ENST00000478389 TSHZ1Q6ZSZ6 1077 aa10.09□□□□□ -0.79
NELFCD-206ENST00000478389 MORC2Q9Y6X9 1032 aaPredicted RBP10.09□□□□□ -0.79
NELFCD-206ENST00000478389 MAST1Q9Y2H9 1570 aa10.09□□□□□ -0.79
NELFCD-206ENST00000478389 CASC1Q6TDU7 716 aa10.09□□□□□ -0.79
NELFCD-206ENST00000478389 USP25Q9UHP3 1055 aa10.09□□□□□ -0.79
NELFCD-206ENST00000478389 TRIM27P14373 513 aa10.09□□□□□ -0.79
NELFCD-206ENST00000478389 AXDND1Q5T1B0 1012 aaPredicted RBP10.09□□□□□ -0.79
NELFCD-206ENST00000478389 DNAJC14Q6Y2X3 702 aaPredicted RBP10.09□□□□□ -0.79
NELFCD-206ENST00000478389 MTA3Q9BTC8 594 aa10.09□□□□□ -0.79
NELFCD-206ENST00000478389 KIAA1524Q8TCG1 905 aa10.08□□□□□ -0.8
NELFCD-206ENST00000478389 ZBTB40Q9NUA8 1239 aa10.08□□□□□ -0.8
NELFCD-206ENST00000478389 ANKRD45Q5TZF3 282 aa10.08□□□□□ -0.8
NELFCD-206ENST00000478389 EGFL6Q8IUX8 553 aa10.08□□□□□ -0.8
NELFCD-206ENST00000478389 KCNV2Q8TDN2 545 aa10.08□□□□□ -0.8
NELFCD-206ENST00000478389 SMTNL1A8MU46 457 aa10.08□□□□□ -0.8
NELFCD-206ENST00000478389 PPRC1Q5VV67 1664 aaKnown RBP10.07□□□□□ -0.8
NELFCD-206ENST00000478389 KDM4FA0A1W2PPD8 638 aa10.07□□□□□ -0.8
NELFCD-206ENST00000478389 TULP2O00295 520 aa10.07□□□□□ -0.8
NELFCD-206ENST00000478389 TNNT3P45378 269 aaPredicted RBP10.07□□□□□ -0.8
NELFCD-206ENST00000478389 NCBP1Q09161 790 aaKnown RBP10.07□□□□□ -0.8
NELFCD-206ENST00000478389 CCDC96Q2M329 555 aa10.07□□□□□ -0.8
NELFCD-206ENST00000478389 FBXO31Q5XUX0 539 aaPredicted RBP10.07□□□□□ -0.8
NELFCD-206ENST00000478389 TTC36A6NLP5 189 aa10.07□□□□□ -0.8
NELFCD-206ENST00000478389 MYBPC2Q14324 1141 aa10.07□□□□□ -0.8
NELFCD-206ENST00000478389 RNF17Q9BXT8 1623 aaKnown RBP10.07□□□□□ -0.8
NELFCD-206ENST00000478389 PAXBP1Q9Y5B6 917 aa10.06□□□□□ -0.8
NELFCD-206ENST00000478389 ATP7AQ04656 1500 aa10.06□□□□□ -0.8
NELFCD-206ENST00000478389 MCM2P49736 904 aa10.06□□□□□ -0.8
NELFCD-206ENST00000478389 LMOD3Q0VAK6 560 aa10.06□□□□□ -0.8
NELFCD-206ENST00000478389 PKP1Q13835 747 aa10.06□□□□□ -0.8
NELFCD-206ENST00000478389 SCAF11Q99590 1463 aaKnown RBP10.06□□□□□ -0.8
NELFCD-206ENST00000478389 MLH3Q9UHC1 1453 aa10.06□□□□□ -0.8
NELFCD-206ENST00000478389 TRIM6-TRIM34B2RNG4 842 aa10.06□□□□□ -0.8
NELFCD-206ENST00000478389 INTS3Q68E01 1043 aaKnown RBP10.06□□□□□ -0.8
NELFCD-206ENST00000478389 C17orf53Q8N3J3 647 aaPredicted RBP10.06□□□□□ -0.8
NELFCD-206ENST00000478389 TRIM34Q9BYJ4 488 aa10.06□□□□□ -0.8
NELFCD-206ENST00000478389 EFCC1Q9HA90 598 aa10.06□□□□□ -0.8
NELFCD-206ENST00000478389 PLA2R1Q13018 1463 aa10.06□□□□□ -0.8
NELFCD-206ENST00000478389 IQSEC2Q5JU85 1478 aa10.06□□□□□ -0.8
NELFCD-206ENST00000478389 MMP14P50281 582 aa10.05□□□□□ -0.8
NELFCD-206ENST00000478389 CCDC183Q5T5S1 534 aa10.05□□□□□ -0.8
NELFCD-206ENST00000478389 TSR2Q969E8 191 aaKnown RBP10.05□□□□□ -0.8
NELFCD-206ENST00000478389 AK9Q5TCS8 1911 aa10.05□□□□□ -0.8
NELFCD-206ENST00000478389 IQGAP3Q86VI3 1631 aa10.05□□□□□ -0.8
NELFCD-206ENST00000478389 EPB41L2O43491 1005 aaKnown RBP10.05□□□□□ -0.8
NELFCD-206ENST00000478389 KRBA2Q6ZNG9 492 aa10.05□□□□□ -0.8
NELFCD-206ENST00000478389 CCDC112Q8NEF3 446 aa10.05□□□□□ -0.8
NELFCD-206ENST00000478389 KIF18AQ8NI77 898 aa10.05□□□□□ -0.8
NELFCD-206ENST00000478389 YY1AP1Q9H869 796 aa10.05□□□□□ -0.8
NELFCD-206ENST00000478389 ABCC11Q96J66 1382 aa10.05□□□□□ -0.8
NELFCD-206ENST00000478389 GOLGA6CA6NDK9 693 aa10.05□□□□□ -0.8
NELFCD-206ENST00000478389 GOLGA6BA6NDN3 693 aa10.05□□□□□ -0.8
NELFCD-206ENST00000478389 GOLGA6DP0CG33 693 aa10.05□□□□□ -0.8
NELFCD-206ENST00000478389 TMEM57Q8N5G2 664 aa10.05□□□□□ -0.8
NELFCD-206ENST00000478389 ZNF397Q8NF99 534 aaPredicted RBP10.05□□□□□ -0.8
NELFCD-206ENST00000478389 GOLGA6AQ9NYA3 693 aa10.05□□□□□ -0.8
NELFCD-206ENST00000478389 NBPF11Q86T75 865 aa10.04□□□□□ -0.8
NELFCD-206ENST00000478389 NSFL1CQ9UNZ2 370 aaKnown RBP10.04□□□□□ -0.8
NELFCD-206ENST00000478389 ZDHHC9Q9Y397 364 aa10.04□□□□□ -0.8
NELFCD-206ENST00000478389 REC8O95072 547 aa10.04□□□□□ -0.8
NELFCD-206ENST00000478389 HSPA2P54652 639 aa10.04□□□□□ -0.8
NELFCD-206ENST00000478389 ZGPATQ8N5A5 531 aaKnown RBP10.04□□□□□ -0.8
NELFCD-206ENST00000478389 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.04□□□□□ -0.8
NELFCD-206ENST00000478389 MTHFSP49914 203 aa10.03□□□□□ -0.8
NELFCD-206ENST00000478389 CTR9Q6PD62 1173 aa10.03□□□□□ -0.8
NELFCD-206ENST00000478389 KIAA1522Q9P206 1035 aaPredicted RBP10.03□□□□□ -0.8
NELFCD-206ENST00000478389 HECW2Q9P2P5 1572 aa10.03□□□□□ -0.8
NELFCD-206ENST00000478389 ERICH4A6NGS2 130 aa10.03□□□□□ -0.8
NELFCD-206ENST00000478389 EXOSC9Q06265 439 aaKnown RBP10.03□□□□□ -0.8
NELFCD-206ENST00000478389 CFAP70Q5T0N1 1121 aa10.03□□□□□ -0.8
NELFCD-206ENST00000478389 SSH1Q8WYL5 1049 aa10.03□□□□□ -0.8
NELFCD-206ENST00000478389 GPATCH3Q96I76 525 aa10.03□□□□□ -0.8
NELFCD-206ENST00000478389 NOB1Q9ULX3 412 aaKnown RBP10.03□□□□□ -0.8
NELFCD-206ENST00000478389 KDM5AP29375 1690 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms