RNA–Protein interactions for RNA: ENST00000478061.5

RBM28-204, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-204ENST00000478061 ASAP1Q9ULH1 1129 aa16.89■□□□□ 0.29
RBM28-204ENST00000478061 SCN11AQ9UI33 1791 aa16.89■□□□□ 0.29
RBM28-204ENST00000478061 APAF1O14727 1248 aa16.88■□□□□ 0.29
RBM28-204ENST00000478061 TXNRD1Q16881 649 aa16.88■□□□□ 0.29
RBM28-204ENST00000478061 SMARCC1Q92922 1105 aaPredicted RBP16.88■□□□□ 0.29
RBM28-204ENST00000478061 ATG3Q9NT62 314 aa16.88■□□□□ 0.29
RBM28-204ENST00000478061 TEFQ10587 303 aa16.87■□□□□ 0.29
RBM28-204ENST00000478061 NEUROD2Q15784 382 aa16.87■□□□□ 0.29
RBM28-204ENST00000478061 PALLDQ8WX93 1383 aa16.87■□□□□ 0.29
RBM28-204ENST00000478061 THUMPD2Q9BTF0 503 aaKnown RBP16.86■□□□□ 0.29
RBM28-204ENST00000478061 LMOD3Q0VAK6 560 aa16.85■□□□□ 0.29
RBM28-204ENST00000478061 LRRC4BQ9NT99 713 aa16.85■□□□□ 0.29
RBM28-204ENST00000478061 TRIM35Q9UPQ4 493 aa16.85■□□□□ 0.29
RBM28-204ENST00000478061 RGPD3A6NKT7 1758 aaPredicted RBP16.84■□□□□ 0.29
RBM28-204ENST00000478061 RGPD4Q7Z3J3 1758 aa16.84■□□□□ 0.29
RBM28-204ENST00000478061 KCNQ4P56696 695 aa16.84■□□□□ 0.29
RBM28-204ENST00000478061 SLC27A3Q5K4L6 730 aa16.84■□□□□ 0.29
RBM28-204ENST00000478061 LOC102724428A0A0B4J2F2 783 aa16.83■□□□□ 0.28
RBM28-204ENST00000478061 SIK1P57059 783 aa16.83■□□□□ 0.28
RBM28-204ENST00000478061 SLC39A6Q13433 755 aa16.83■□□□□ 0.28
RBM28-204ENST00000478061 DLG5Q8TDM6 1919 aa16.83■□□□□ 0.28
RBM28-204ENST00000478061 CCNL1Q9UK58 526 aaPredicted RBP16.83■□□□□ 0.28
RBM28-204ENST00000478061 SENP3-EIF4A1A0A087X0R7 540 aa16.81■□□□□ 0.28
RBM28-204ENST00000478061 BTBD11A6QL63 1104 aa16.81■□□□□ 0.28
RBM28-204ENST00000478061 PTCD1O75127 700 aaKnown RBP16.81■□□□□ 0.28
RBM28-204ENST00000478061 TAF7Q15545 349 aaPredicted RBP16.81■□□□□ 0.28
RBM28-204ENST00000478061 SLC4A9Q96Q91 983 aa16.81■□□□□ 0.28
RBM28-204ENST00000478061 RREB1Q92766 1687 aa16.81■□□□□ 0.28
RBM28-204ENST00000478061 VIRMAQ69YN4 1812 aaKnown RBP16.8■□□□□ 0.28
RBM28-204ENST00000478061 LY75O60449 1722 aa16.8■□□□□ 0.28
RBM28-204ENST00000478061 RBM42Q9BTD8 480 aaKnown RBP16.8■□□□□ 0.28
RBM28-204ENST00000478061 KCNQ3O43525 872 aa16.79■□□□□ 0.28
RBM28-204ENST00000478061 ZNF790Q6PG37 636 aa16.79■□□□□ 0.28
RBM28-204ENST00000478061 ANO8Q9HCE9 1232 aaPredicted RBP16.79■□□□□ 0.28
RBM28-204ENST00000478061 MIS18AQ9NYP9 233 aa16.79■□□□□ 0.28
RBM28-204ENST00000478061 SIPA1L3O60292 1781 aaPredicted RBP16.79■□□□□ 0.28
RBM28-204ENST00000478061 ATP6V1AP38606 617 aa16.78■□□□□ 0.28
RBM28-204ENST00000478061 ITPK1Q13572 414 aa16.78■□□□□ 0.28
RBM28-204ENST00000478061 NCBP3Q53F19 620 aaKnown RBP16.78■□□□□ 0.28
RBM28-204ENST00000478061 TTC5Q8N0Z6 440 aa16.78■□□□□ 0.28
RBM28-204ENST00000478061 NUP188Q5SRE5 1749 aa16.78■□□□□ 0.28
RBM28-204ENST00000478061 KCPQ6ZWJ8 1503 aa16.77■□□□□ 0.28
RBM28-204ENST00000478061 CCDC27Q2M243 656 aa16.77■□□□□ 0.28
RBM28-204ENST00000478061 NBPF14Q5TI25 921 aa16.77■□□□□ 0.28
RBM28-204ENST00000478061 ZNF496Q96IT1 587 aaPredicted RBP16.77■□□□□ 0.28
RBM28-204ENST00000478061 PAPPAQ13219 1627 aa16.77■□□□□ 0.27
RBM28-204ENST00000478061 WWC1Q8IX03 1113 aa16.76■□□□□ 0.27
RBM28-204ENST00000478061 ZNF827Q17R98 1081 aa16.75■□□□□ 0.27
RBM28-204ENST00000478061 LINC00116Q8NCU8 138 aa16.75■□□□□ 0.27
RBM28-204ENST00000478061 AKT1S1Q96B36 256 aa16.75■□□□□ 0.27
RBM28-204ENST00000478061 BABAM1Q9NWV8 329 aa16.75■□□□□ 0.27
RBM28-204ENST00000478061 SALL2Q9Y467 1007 aaPredicted RBP16.75■□□□□ 0.27
RBM28-204ENST00000478061 CHL1O00533 1208 aa16.74■□□□□ 0.27
RBM28-204ENST00000478061 HMGB2P26583 209 aaKnown RBP16.74■□□□□ 0.27
RBM28-204ENST00000478061 SLC15A2Q16348 729 aa16.74■□□□□ 0.27
RBM28-204ENST00000478061 VSIG10Q8N0Z9 540 aa16.74■□□□□ 0.27
RBM28-204ENST00000478061 FMNL2Q96PY5 1086 aa16.74■□□□□ 0.27
RBM28-204ENST00000478061 STK32BQ9NY57 414 aa16.74■□□□□ 0.27
RBM28-204ENST00000478061 CALD1Q05682 793 aaKnown RBP16.73■□□□□ 0.27
RBM28-204ENST00000478061 R3HDM1Q15032 1099 aaKnown RBP16.73■□□□□ 0.27
RBM28-204ENST00000478061 DNAJC10Q8IXB1 793 aa16.73■□□□□ 0.27
RBM28-204ENST00000478061 NGEFQ8N5V2 710 aa16.73■□□□□ 0.27
RBM28-204ENST00000478061 TSPYL4Q9UJ04 414 aa16.73■□□□□ 0.27
RBM28-204ENST00000478061 HEG1Q9ULI3 1381 aa16.73■□□□□ 0.27
RBM28-204ENST00000478061 UBR2Q8IWV8 1755 aa16.72■□□□□ 0.27
RBM28-204ENST00000478061 PSDA5PKW4 1024 aaPredicted RBP16.72■□□□□ 0.27
RBM28-204ENST00000478061 ZNF853P0CG23 659 aa16.72■□□□□ 0.27
RBM28-204ENST00000478061 EIF4A1P60842 406 aaKnown RBP16.72■□□□□ 0.27
RBM28-204ENST00000478061 CFAP44Q96MT7 982 aa16.72■□□□□ 0.27
RBM28-204ENST00000478061 LAS1LQ9Y4W2 734 aaKnown RBP16.72■□□□□ 0.27
RBM28-204ENST00000478061 ZNF831Q5JPB2 1677 aa16.72■□□□□ 0.27
RBM28-204ENST00000478061 IFT57Q9NWB7 429 aa16.71■□□□□ 0.27
RBM28-204ENST00000478061 C5P01031 1676 aa16.7■□□□□ 0.26
RBM28-204ENST00000478061 CYP19A1P11511 503 aaPredicted RBP16.7■□□□□ 0.26
RBM28-204ENST00000478061 CRKLP46109 303 aaKnown RBP16.7■□□□□ 0.26
RBM28-204ENST00000478061 GNAI1P63096 354 aa16.7■□□□□ 0.26
RBM28-204ENST00000478061 RC3H1Q5TC82 1133 aaKnown RBP16.7■□□□□ 0.26
RBM28-204ENST00000478061 AK7Q96M32 723 aa16.7■□□□□ 0.26
RBM28-204ENST00000478061 TFCP2L1Q9NZI6 479 aa16.7■□□□□ 0.26
RBM28-204ENST00000478061 CNTNAP4Q9C0A0 1308 aa16.7■□□□□ 0.26
RBM28-204ENST00000478061 TAF1LQ8IZX4 1826 aa16.69■□□□□ 0.26
RBM28-204ENST00000478061 PRAMEF22A3QJZ6 481 aa16.69■□□□□ 0.26
RBM28-204ENST00000478061 SNRPA1P09661 255 aaKnown RBP16.69■□□□□ 0.26
RBM28-204ENST00000478061 WDR63Q8IWG1 891 aa16.69■□□□□ 0.26
RBM28-204ENST00000478061 TEX13AQ9BXU3 409 aaPredicted RBP16.69■□□□□ 0.26
RBM28-204ENST00000478061 MBIPQ9NS73 344 aa16.69■□□□□ 0.26
RBM28-204ENST00000478061 KDM3BQ7LBC6 1761 aa16.69■□□□□ 0.26
RBM28-204ENST00000478061 IL16Q14005 1332 aa16.69■□□□□ 0.26
RBM28-204ENST00000478061 C4BP0C0L5 1744 aa16.68■□□□□ 0.26
RBM28-204ENST00000478061 TJP1Q07157 1748 aa16.68■□□□□ 0.26
RBM28-204ENST00000478061 CICQ96RK0 1608 aaPredicted RBP16.68■□□□□ 0.26
RBM28-204ENST00000478061 STARD3NLO95772 234 aa16.68■□□□□ 0.26
RBM28-204ENST00000478061 INTS5Q6P9B9 1019 aaKnown RBP16.68■□□□□ 0.26
RBM28-204ENST00000478061 AMIGO3Q86WK7 504 aa16.68■□□□□ 0.26
RBM28-204ENST00000478061 ZNF521Q96K83 1311 aa16.68■□□□□ 0.26
RBM28-204ENST00000478061 GNPATO15228 680 aa16.67■□□□□ 0.26
RBM28-204ENST00000478061 GIGYF1O75420 1035 aaPredicted RBP16.67■□□□□ 0.26
RBM28-204ENST00000478061 CCDC87Q9NVE4 849 aa16.67■□□□□ 0.26
RBM28-204ENST00000478061 USP16Q9Y5T5 823 aa16.67■□□□□ 0.26
RBM28-204ENST00000478061 PNPLA7Q6ZV29 1317 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms