RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-231ENST00000477334 CLN3Q13286 438 aa8.19□□□□□ -1.1
RBM39-231ENST00000477334 NLRP3Q96P20 1036 aa8.19□□□□□ -1.1
RBM39-231ENST00000477334 MYCP01106 439 aaPredicted RBP8.18□□□□□ -1.1
RBM39-231ENST00000477334 RHOQP17081 205 aa8.18□□□□□ -1.1
RBM39-231ENST00000477334 SRPK2P78362 688 aaKnown RBP8.18□□□□□ -1.1
RBM39-231ENST00000477334 RNFT1Q5M7Z0 435 aa8.18□□□□□ -1.1
RBM39-231ENST00000477334 KANK4Q5T7N3 995 aaPredicted RBP8.18□□□□□ -1.1
RBM39-231ENST00000477334 PBXIP1Q96AQ6 731 aa8.18□□□□□ -1.1
RBM39-231ENST00000477334 VRTNQ9H8Y1 702 aa8.18□□□□□ -1.1
RBM39-231ENST00000477334 ARHGEF10LQ9HCE6 1279 aa8.18□□□□□ -1.1
RBM39-231ENST00000477334 NOD1Q9Y239 953 aa8.18□□□□□ -1.1
RBM39-231ENST00000477334 SLC27A3Q5K4L6 730 aa8.17□□□□□ -1.1
RBM39-231ENST00000477334 SIRT1Q96EB6 747 aa8.17□□□□□ -1.1
RBM39-231ENST00000477334 CUEDC1Q9NWM3 386 aaPredicted RBP8.17□□□□□ -1.1
RBM39-231ENST00000477334 GNRH1P01148 92 aa8.16□□□□□ -1.1
RBM39-231ENST00000477334 GRIP2Q9C0E4 1043 aa8.16□□□□□ -1.1
RBM39-231ENST00000477334 PPP1R15AO75807 674 aaPredicted RBP8.15□□□□□ -1.1
RBM39-231ENST00000477334 RASA1P20936 1047 aa8.15□□□□□ -1.1
RBM39-231ENST00000477334 RAB6BQ9NRW1 208 aa8.15□□□□□ -1.1
RBM39-231ENST00000477334 SPATA31C2B4DYI2 1134 aa8.14□□□□□ -1.11
RBM39-231ENST00000477334 SLURP2P0DP57 97 aa8.14□□□□□ -1.11
RBM39-231ENST00000477334 GTF2IP78347 998 aa8.14□□□□□ -1.11
RBM39-231ENST00000477334 CLDN10P78369 228 aa8.14□□□□□ -1.11
RBM39-231ENST00000477334 PSME1Q06323 249 aa8.14□□□□□ -1.11
RBM39-231ENST00000477334 POU4F2Q12837 409 aa8.14□□□□□ -1.11
RBM39-231ENST00000477334 CRTC2Q53ET0 693 aaPredicted RBP8.14□□□□□ -1.11
RBM39-231ENST00000477334 NBPF10Q6P3W6 841 aaKnown RBP8.14□□□□□ -1.11
RBM39-231ENST00000477334 TRIM50Q86XT4 487 aa8.14□□□□□ -1.11
RBM39-231ENST00000477334 TRIM22Q8IYM9 498 aa8.14□□□□□ -1.11
RBM39-231ENST00000477334 OGFOD1Q8N543 542 aa8.14□□□□□ -1.11
RBM39-231ENST00000477334 NBPF15Q8N660 670 aa8.14□□□□□ -1.11
RBM39-231ENST00000477334 GMCL1Q96IK5 515 aa8.14□□□□□ -1.11
RBM39-231ENST00000477334 ZNF594Q96JF6 807 aaPredicted RBP8.14□□□□□ -1.11
RBM39-231ENST00000477334 DYRK1BQ9Y463 629 aa8.14□□□□□ -1.11
RBM39-231ENST00000477334 ACIN1Q9UKV3 1341 aaKnown RBP8.13□□□□□ -1.11
RBM39-231ENST00000477334 IL2RAP01589 272 aa8.13□□□□□ -1.11
RBM39-231ENST00000477334 WDR44Q5JSH3 913 aa8.13□□□□□ -1.11
RBM39-231ENST00000477334 LARP1Q6PKG0 1096 aaKnown RBP8.13□□□□□ -1.11
RBM39-231ENST00000477334 CNKSR1Q969H4 720 aa8.13□□□□□ -1.11
RBM39-231ENST00000477334 ZNF837Q96EG3 531 aaPredicted RBP8.13□□□□□ -1.11
RBM39-231ENST00000477334 ESYT1Q9BSJ8 1104 aa8.13□□□□□ -1.11
RBM39-231ENST00000477334 KIAA1024Q9UPX6 916 aa8.13□□□□□ -1.11
RBM39-231ENST00000477334 PCDHGA11Q9Y5H2 935 aa8.13□□□□□ -1.11
RBM39-231ENST00000477334 USP17L15C9J2P7 530 aa8.12□□□□□ -1.11
RBM39-231ENST00000477334 USP17L10C9JJH3 530 aa8.12□□□□□ -1.11
RBM39-231ENST00000477334 USP17L13C9JLJ4 530 aa8.12□□□□□ -1.11
RBM39-231ENST00000477334 USP17L12C9JPN9 530 aa8.12□□□□□ -1.11
RBM39-231ENST00000477334 USP17L11C9JVI0 530 aa8.12□□□□□ -1.11
RBM39-231ENST00000477334 USP17L21D6R901 530 aa8.12□□□□□ -1.11
RBM39-231ENST00000477334 USP17L18D6R9N7 530 aa8.12□□□□□ -1.11
RBM39-231ENST00000477334 USP17L22D6RA61 530 aa8.12□□□□□ -1.11
RBM39-231ENST00000477334 USP17L17D6RBQ6 530 aa8.12□□□□□ -1.11
RBM39-231ENST00000477334 USP17L19D6RCP7 530 aa8.12□□□□□ -1.11
RBM39-231ENST00000477334 USP17L20D6RJB6 530 aa8.12□□□□□ -1.11
RBM39-231ENST00000477334 WASLO00401 505 aaPredicted RBP8.12□□□□□ -1.11
RBM39-231ENST00000477334 STAU1O95793 577 aaKnown RBP8.12□□□□□ -1.11
RBM39-231ENST00000477334 ATP1A2P50993 1020 aa8.12□□□□□ -1.11
RBM39-231ENST00000477334 USP17L24Q0WX57 530 aa8.12□□□□□ -1.11
RBM39-231ENST00000477334 ZNF385CQ66K41 422 aaPredicted RBP8.12□□□□□ -1.11
RBM39-231ENST00000477334 DNAAF2Q9NVR5 837 aaKnown RBP8.12□□□□□ -1.11
RBM39-231ENST00000477334 FAM196BA6NMK8 535 aa8.11□□□□□ -1.11
RBM39-231ENST00000477334 ZBTB7BO15156 539 aaPredicted RBP8.11□□□□□ -1.11
RBM39-231ENST00000477334 PTK7Q13308 1070 aa8.11□□□□□ -1.11
RBM39-231ENST00000477334 GAS6Q14393 721 aa8.11□□□□□ -1.11
RBM39-231ENST00000477334 RIPOR1Q6ZS17 1223 aa8.11□□□□□ -1.11
RBM39-231ENST00000477334 TAS1R3Q7RTX0 852 aa8.11□□□□□ -1.11
RBM39-231ENST00000477334 SVOPQ8N4V2 548 aa8.11□□□□□ -1.11
RBM39-231ENST00000477334 HRH3Q9Y5N1 445 aa8.11□□□□□ -1.11
RBM39-231ENST00000477334 H7C1W4 665 aa8.1□□□□□ -1.11
RBM39-231ENST00000477334 ATG7O95352 703 aa8.1□□□□□ -1.11
RBM39-231ENST00000477334 CENPCQ03188 943 aa8.1□□□□□ -1.11
RBM39-231ENST00000477334 DBN1Q16643 649 aa8.1□□□□□ -1.11
RBM39-231ENST00000477334 CCDC102BQ68D86 513 aa8.1□□□□□ -1.11
RBM39-231ENST00000477334 TPCN2Q8NHX9 752 aa8.1□□□□□ -1.11
RBM39-231ENST00000477334 XAGE2Q96GT9 111 aa8.1□□□□□ -1.11
RBM39-231ENST00000477334 GAS2L1Q99501 681 aaPredicted RBP8.1□□□□□ -1.11
RBM39-231ENST00000477334 TIMMDC1Q9NPL8 285 aa8.1□□□□□ -1.11
RBM39-231ENST00000477334 NOVA2Q9UNW9 492 aaKnown RBP8.1□□□□□ -1.11
RBM39-231ENST00000477334 ADAMTS2O95450 1211 aa8.09□□□□□ -1.11
RBM39-231ENST00000477334 SRSF11Q05519 484 aaKnown RBP8.09□□□□□ -1.11
RBM39-231ENST00000477334 ESCO1Q5FWF5 840 aa8.09□□□□□ -1.11
RBM39-231ENST00000477334 FOXR1Q6PIV2 292 aa8.09□□□□□ -1.11
RBM39-231ENST00000477334 LARGE2Q8N3Y3 721 aa8.09□□□□□ -1.11
RBM39-231ENST00000477334 WHAMMQ8TF30 809 aa8.09□□□□□ -1.11
RBM39-231ENST00000477334 DPYDQ12882 1025 aa8.08□□□□□ -1.12
RBM39-231ENST00000477334 ANKMY2Q8IV38 441 aa8.08□□□□□ -1.12
RBM39-231ENST00000477334 RETREG2Q8NC44 543 aa8.08□□□□□ -1.12
RBM39-231ENST00000477334 ZSCAN10Q96SZ4 725 aaPredicted RBP8.08□□□□□ -1.12
RBM39-231ENST00000477334 FHDC1Q9C0D6 1143 aaPredicted RBP8.08□□□□□ -1.12
RBM39-231ENST00000477334 ZMIZ1Q9ULJ6 1067 aa8.08□□□□□ -1.12
RBM39-231ENST00000477334 ADAMTS8Q9UP79 889 aa8.08□□□□□ -1.12
RBM39-231ENST00000477334 GPR25O00155 361 aa8.07□□□□□ -1.12
RBM39-231ENST00000477334 F11P03951 625 aa8.07□□□□□ -1.12
RBM39-231ENST00000477334 SCNN1DP51172 638 aa8.07□□□□□ -1.12
RBM39-231ENST00000477334 KCNMA1Q12791 1236 aa8.07□□□□□ -1.12
RBM39-231ENST00000477334 SIX5Q8N196 739 aa8.07□□□□□ -1.12
RBM39-231ENST00000477334 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.07□□□□□ -1.12
RBM39-231ENST00000477334 STK32AQ8WU08 396 aa8.07□□□□□ -1.12
RBM39-231ENST00000477334 ETNK1Q9HBU6 452 aa8.07□□□□□ -1.12
RBM39-231ENST00000477334 MBIPQ9NS73 344 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms