RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	OIP5	O43482	229 aa		7.61	□□□□□ -1.19
NSMCE4A-208	ENST00000477289	MX2	P20592	715 aa		7.61	□□□□□ -1.19
NSMCE4A-208	ENST00000477289	ERVK-9	P63128	1117 aa		7.61	□□□□□ -1.19
NSMCE4A-208	ENST00000477289		Q8N3U1	123 aa		7.61	□□□□□ -1.19
NSMCE4A-208	ENST00000477289	DYRK1B	Q9Y463	629 aa		7.61	□□□□□ -1.19
NSMCE4A-208	ENST00000477289	KRBA1	A5PL33	1030 aa		7.6	□□□□□ -1.19
NSMCE4A-208	ENST00000477289	ATP5J2-PTCD1	G3V325	749 aa		7.6	□□□□□ -1.19
NSMCE4A-208	ENST00000477289	SNRPN	P63162	240 aa	Known RBP	7.6	□□□□□ -1.19
NSMCE4A-208	ENST00000477289	GAS2L1	Q99501	681 aa	Predicted RBP	7.6	□□□□□ -1.19
NSMCE4A-208	ENST00000477289	NSFL1C	Q9UNZ2	370 aa	Known RBP	7.6	□□□□□ -1.19
NSMCE4A-208	ENST00000477289	NDUFB9	Q9Y6M9	179 aa		7.6	□□□□□ -1.19
NSMCE4A-208	ENST00000477289	PRDM2	Q13029	1718 aa		7.6	□□□□□ -1.19
NSMCE4A-208	ENST00000477289	MEN1	O00255	615 aa		7.59	□□□□□ -1.19
NSMCE4A-208	ENST00000477289	GPC1	P35052	558 aa		7.59	□□□□□ -1.19
NSMCE4A-208	ENST00000477289	SCTR	P47872	440 aa		7.59	□□□□□ -1.19
NSMCE4A-208	ENST00000477289	CC2D2B	Q6DHV5	1058 aa		7.59	□□□□□ -1.19
NSMCE4A-208	ENST00000477289	CCDC125	Q86Z20	511 aa		7.59	□□□□□ -1.19
NSMCE4A-208	ENST00000477289	ABCC8	Q09428	1581 aa		7.59	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	MRC2	Q9UBG0	1479 aa		7.58	□□□□□ -1.2
NSMCE4A-208	ENST00000477289		A0A1W2PRU2	124 aa		7.58	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	FURIN	P09958	794 aa		7.58	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	MCCD1	P59942	119 aa	Predicted RBP	7.58	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	POU4F2	Q12837	409 aa		7.58	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	RNF20	Q5VTR2	975 aa		7.58	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	TRIM52	Q96A61	297 aa		7.57	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	OXCT2	Q9BYC2	517 aa	Predicted RBP	7.57	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	OSBPL3	Q9H4L5	887 aa		7.57	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	PCDHB11	Q9Y5F2	797 aa		7.57	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	KIF21A	Q7Z4S6	1674 aa		7.57	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	CUX2	O14529	1486 aa		7.56	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	TRAK2	O60296	914 aa		7.56	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	PSMG3-AS1	Q96PY0	264 aa		7.56	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	SHISA8	B8ZZ34	492 aa		7.55	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	COL8A1	P27658	744 aa		7.55	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	SLC27A3	Q5K4L6	730 aa		7.55	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	NUCKS1	Q9H1E3	243 aa	Known RBP	7.55	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	MKL2	Q9ULH7	1088 aa		7.55	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	TBC1D2B	Q9UPU7	963 aa		7.55	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	ZNF330	Q9Y3S2	320 aa	Predicted RBP	7.55	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	APBB1	O00213	710 aa		7.54	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	MAP2K3	P46734	347 aa		7.54	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	CLN3	Q13286	438 aa		7.54	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	NBPF10	Q6P3W6	841 aa	Known RBP	7.54	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	ALYREF	Q86V81	257 aa	Known RBP	7.54	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	NBPF15	Q8N660	670 aa		7.54	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	ZNF592	Q92610	1267 aa		7.54	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	GRIP2	Q9C0E4	1043 aa		7.54	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	CEP126	Q9P2H0	1117 aa		7.54	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	7.53	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	IRF5	Q13568	498 aa		7.53	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	C1orf229	Q6ZS94	237 aa	Predicted RBP	7.53	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	CYP2U1	Q7Z449	544 aa		7.53	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	NLRP3	Q96P20	1036 aa		7.53	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	CCDC85A	Q96PX6	553 aa	Predicted RBP	7.53	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	CDCA7	Q9BWT1	371 aa	Predicted RBP	7.53	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	ARHGEF10L	Q9HCE6	1279 aa		7.53	□□□□□ -1.2
NSMCE4A-208	ENST00000477289	F11	P03951	625 aa		7.52	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	WDR44	Q5JSH3	913 aa		7.52	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	CFHR5	Q9BXR6	569 aa		7.52	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	KRTAP9-2	Q9BYQ4	174 aa		7.52	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	RRAGC	Q9HB90	399 aa		7.52	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	TIMMDC1	Q9NPL8	285 aa		7.52	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	THOC2	Q8NI27	1593 aa	Known RBP	7.51	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	SPATA31C2	B4DYI2	1134 aa		7.51	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	KLRG1	Q96E93	195 aa		7.51	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	RAB6B	Q9NRW1	208 aa		7.51	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	WDR62	O43379	1518 aa		7.51	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	WRN	Q14191	1432 aa	Predicted RBP eCLIP	7.51	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	DNMBP	Q6XZF7	1577 aa		7.5	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	THBS1	P07996	1170 aa		7.5	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	TSGA10IP	Q3SY00	556 aa		7.5	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	PHTF2	Q8N3S3	785 aa		7.5	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	EDARADD	Q8WWZ3	215 aa		7.5	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	TOPBP1	Q92547	1522 aa		7.5	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	URB2	Q14146	1524 aa	Known RBP	7.49	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	KRTAP9-6	A0A140TA67	174 aa		7.49	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	IL2RA	P01589	272 aa		7.49	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	GRIN2C	Q14957	1233 aa		7.49	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	TAS1R3	Q7RTX0	852 aa		7.49	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	HRH3	Q9Y5N1	445 aa		7.49	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	WASL	O00401	505 aa	Predicted RBP	7.48	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	GNRH1	P01148	92 aa		7.48	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	LINC00114	Q6XXX2	140 aa		7.48	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	SUV39H2	Q9H5I1	410 aa		7.48	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	GDF2	Q9UK05	429 aa	Predicted RBP	7.48	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	C1QTNF9B	B2RNN3	333 aa		7.47	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	HOXB4	P17483	251 aa	Predicted RBP	7.47	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	CNKSR1	Q969H4	720 aa		7.47	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	ESYT1	Q9BSJ8	1104 aa		7.47	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	GPAM	Q9HCL2	828 aa		7.47	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	PHF24	Q9UPV7	400 aa		7.47	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	IFT140	Q96RY7	1462 aa		7.47	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	SOGA1	O94964	1423 aa		7.46	□□□□□ -1.21
NSMCE4A-208	ENST00000477289	EIF4G2	P78344	907 aa	Known RBP eCLIP	7.46	□□□□□ -1.22
NSMCE4A-208	ENST00000477289	CENPC	Q03188	943 aa		7.46	□□□□□ -1.22
NSMCE4A-208	ENST00000477289	VAC14	Q08AM6	782 aa		7.46	□□□□□ -1.22
NSMCE4A-208	ENST00000477289	GOLGA6L1	Q8N7Z2	621 aa		7.46	□□□□□ -1.22
NSMCE4A-208	ENST00000477289	XAGE2	Q96GT9	111 aa		7.46	□□□□□ -1.22
NSMCE4A-208	ENST00000477289	FHDC1	Q9C0D6	1143 aa	Predicted RBP	7.46	□□□□□ -1.22
NSMCE4A-208	ENST00000477289	ESF1	Q9H501	851 aa	Known RBP	7.46	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms