RNA–Protein interactions for RNA: ENST00000476972.6

GMDS-204, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-204ENST00000476972 MTHFSP49914 203 aa25.86■■□□□ 1.73
GMDS-204ENST00000476972 CNGB1Q14028 1251 aaPredicted RBP25.86■■□□□ 1.73
GMDS-204ENST00000476972 ITPK1Q13572 414 aa25.85■■□□□ 1.73
GMDS-204ENST00000476972 SSFA2P28290 1259 aa25.84■■□□□ 1.73
GMDS-204ENST00000476972 IL13P35225 146 aa25.84■■□□□ 1.73
GMDS-204ENST00000476972 ATP6V1AP38606 617 aa25.84■■□□□ 1.73
GMDS-204ENST00000476972 ATG3Q9NT62 314 aa25.84■■□□□ 1.73
GMDS-204ENST00000476972 GIGYF1O75420 1035 aaPredicted RBP25.83■■□□□ 1.73
GMDS-204ENST00000476972 AEBP1Q8IUX7 1158 aa25.83■■□□□ 1.73
GMDS-204ENST00000476972 CHD4Q14839 1912 aa25.82■■□□□ 1.72
GMDS-204ENST00000476972 C5P01031 1676 aa25.82■■□□□ 1.72
GMDS-204ENST00000476972 KDRP35968 1356 aa25.82■■□□□ 1.72
GMDS-204ENST00000476972 COL3A1P02461 1466 aaPredicted RBP25.8■■□□□ 1.72
GMDS-204ENST00000476972 GNPATO15228 680 aa25.8■■□□□ 1.72
GMDS-204ENST00000476972 SULT6B1Q6IMI4 303 aa25.8■■□□□ 1.72
GMDS-204ENST00000476972 C4BP0C0L5 1744 aa25.78■■□□□ 1.72
GMDS-204ENST00000476972 ERVV-2B6SEH9 535 aa25.76■■□□□ 1.71
GMDS-204ENST00000476972 PLEKHO1Q53GL0 409 aaPredicted RBP25.76■■□□□ 1.71
GMDS-204ENST00000476972 WWC3Q9ULE0 1092 aa25.76■■□□□ 1.71
GMDS-204ENST00000476972 DCAF5Q96JK2 942 aa25.75■■□□□ 1.71
GMDS-204ENST00000476972 SLC4A9Q96Q91 983 aa25.75■■□□□ 1.71
GMDS-204ENST00000476972 DIAPH1O60610 1272 aaKnown RBP25.74■■□□□ 1.71
GMDS-204ENST00000476972 HSP90AB1P08238 724 aaKnown RBP25.74■■□□□ 1.71
GMDS-204ENST00000476972 AMOTQ4VCS5 1084 aa25.74■■□□□ 1.71
GMDS-204ENST00000476972 ZNF530Q6P9A1 599 aaPredicted RBP25.74■■□□□ 1.71
GMDS-204ENST00000476972 RBM42Q9BTD8 480 aaKnown RBP25.74■■□□□ 1.71
GMDS-204ENST00000476972 TAF1LQ8IZX4 1826 aa25.73■■□□□ 1.71
GMDS-204ENST00000476972 TRAPPC3LQ5T215 181 aa25.73■■□□□ 1.71
GMDS-204ENST00000476972 KDM6AO15550 1401 aaPredicted RBP25.72■■□□□ 1.71
GMDS-204ENST00000476972 RTCBQ9Y3I0 505 aaKnown RBP25.72■■□□□ 1.71
GMDS-204ENST00000476972 MMP10P09238 476 aa25.71■■□□□ 1.71
GMDS-204ENST00000476972 HMOX1P09601 288 aa25.71■■□□□ 1.71
GMDS-204ENST00000476972 ATP10DQ9P241 1426 aa25.71■■□□□ 1.71
GMDS-204ENST00000476972 CABP4P57796 275 aa25.7■■□□□ 1.7
GMDS-204ENST00000476972 RC3H1Q5TC82 1133 aaKnown RBP25.69■■□□□ 1.7
GMDS-204ENST00000476972 C1orf141Q5JVX7 400 aa25.68■■□□□ 1.7
GMDS-204ENST00000476972 NLGN1Q8N2Q7 840 aa25.68■■□□□ 1.7
GMDS-204ENST00000476972 ARHGEF1Q92888 912 aaKnown RBP25.68■■□□□ 1.7
GMDS-204ENST00000476972 GPBP1L1Q9HC44 474 aaPredicted RBP25.68■■□□□ 1.7
GMDS-204ENST00000476972 SCN11AQ9UI33 1791 aa25.67■■□□□ 1.7
GMDS-204ENST00000476972 UBR3Q6ZT12 1888 aa25.66■■□□□ 1.7
GMDS-204ENST00000476972 RPS6KA4O75676 772 aa25.65■■□□□ 1.7
GMDS-204ENST00000476972 PPP2R1AP30153 589 aa25.65■■□□□ 1.7
GMDS-204ENST00000476972 NFATC2IPQ8NCF5 419 aa25.65■■□□□ 1.7
GMDS-204ENST00000476972 ZNF526Q8TF50 670 aaPredicted RBP25.65■■□□□ 1.7
GMDS-204ENST00000476972 U2SURPO15042 1029 aaKnown RBP25.64■■□□□ 1.7
GMDS-204ENST00000476972 PTCD1O75127 700 aaKnown RBP25.64■■□□□ 1.7
GMDS-204ENST00000476972 ADRA2BP18089 450 aa25.64■■□□□ 1.7
GMDS-204ENST00000476972 VIRMAQ69YN4 1812 aaKnown RBP25.64■■□□□ 1.7
GMDS-204ENST00000476972 RFC4P35249 363 aa25.63■■□□□ 1.69
GMDS-204ENST00000476972 CFAP53Q96M91 514 aa25.63■■□□□ 1.69
GMDS-204ENST00000476972 CNTNAP4Q9C0A0 1308 aa25.63■■□□□ 1.69
GMDS-204ENST00000476972 ADCY9O60503 1353 aa25.62■■□□□ 1.69
GMDS-204ENST00000476972 GYS1P13807 737 aa25.62■■□□□ 1.69
GMDS-204ENST00000476972 TGFB2P61812 414 aa25.62■■□□□ 1.69
GMDS-204ENST00000476972 CEP350Q5VT06 3117 aa25.61■■□□□ 1.69
GMDS-204ENST00000476972 A0A0G2JLW4 131 aa25.61■■□□□ 1.69
GMDS-204ENST00000476972 AKAP4Q5JQC9 854 aa25.6■■□□□ 1.69
GMDS-204ENST00000476972 ADAMTS7Q9UKP4 1686 aa25.6■■□□□ 1.69
GMDS-204ENST00000476972 ZNF831Q5JPB2 1677 aa25.59■■□□□ 1.69
GMDS-204ENST00000476972 MTHFSDQ2M296 383 aaKnown RBP25.58■■□□□ 1.69
GMDS-204ENST00000476972 CCDC87Q9NVE4 849 aa25.58■■□□□ 1.69
GMDS-204ENST00000476972 MRC1P22897 1456 aa25.58■■□□□ 1.69
GMDS-204ENST00000476972 BCS1LQ9Y276 419 aa25.57■■□□□ 1.68
GMDS-204ENST00000476972 PARP3Q9Y6F1 533 aa25.57■■□□□ 1.68
GMDS-204ENST00000476972 PXDNLA1KZ92 1463 aa25.56■■□□□ 1.68
GMDS-204ENST00000476972 DPEP1P16444 411 aa25.56■■□□□ 1.68
GMDS-204ENST00000476972 CRKLP46109 303 aaKnown RBP25.56■■□□□ 1.68
GMDS-204ENST00000476972 COL5A3P25940 1745 aaPredicted RBP25.55■■□□□ 1.68
GMDS-204ENST00000476972 SRP68Q9UHB9 627 aaKnown RBP25.54■■□□□ 1.68
GMDS-204ENST00000476972 DDX10Q13206 875 aaKnown RBP25.53■■□□□ 1.68
GMDS-204ENST00000476972 LGR6Q9HBX8 967 aa25.53■■□□□ 1.68
GMDS-204ENST00000476972 NUDCQ9Y266 331 aa25.53■■□□□ 1.68
GMDS-204ENST00000476972 RNMTO43148 476 aaKnown RBP25.52■■□□□ 1.68
GMDS-204ENST00000476972 FKBP8Q14318 412 aa25.52■■□□□ 1.68
GMDS-204ENST00000476972 ARHGAP27Q6ZUM4 889 aa25.52■■□□□ 1.68
GMDS-204ENST00000476972 RSPH6AQ9H0K4 717 aa25.52■■□□□ 1.68
GMDS-204ENST00000476972 C10orf71Q711Q0 1435 aa25.52■■□□□ 1.68
GMDS-204ENST00000476972 CICQ96RK0 1608 aaPredicted RBP25.52■■□□□ 1.68
GMDS-204ENST00000476972 FCHSD2O94868 740 aa25.51■■□□□ 1.67
GMDS-204ENST00000476972 INTS5Q6P9B9 1019 aaKnown RBP25.51■■□□□ 1.67
GMDS-204ENST00000476972 SLC52A2Q9HAB3 445 aa25.51■■□□□ 1.67
GMDS-204ENST00000476972 KCNA3P22001 575 aa25.5■■□□□ 1.67
GMDS-204ENST00000476972 PRKAR2BP31323 418 aa25.5■■□□□ 1.67
GMDS-204ENST00000476972 TJP1Q07157 1748 aa25.5■■□□□ 1.67
GMDS-204ENST00000476972 KIF3CO14782 793 aa25.49■■□□□ 1.67
GMDS-204ENST00000476972 U2AF1L5P0DN76 240 aaPredicted RBP25.49■■□□□ 1.67
GMDS-204ENST00000476972 HSPA6P17066 643 aa25.49■■□□□ 1.67
GMDS-204ENST00000476972 U2AF1Q01081 240 aaKnown RBP eCLIP25.49■■□□□ 1.67
GMDS-204ENST00000476972 GAS2L2Q8NHY3 880 aa25.49■■□□□ 1.67
GMDS-204ENST00000476972 USP42Q9H9J4 1324 aaKnown RBP25.48■■□□□ 1.67
GMDS-204ENST00000476972 ZEB1P37275 1124 aaPredicted RBP25.48■■□□□ 1.67
GMDS-204ENST00000476972 DNAJC10Q8IXB1 793 aa25.48■■□□□ 1.67
GMDS-204ENST00000476972 DDR1Q08345 913 aa25.47■■□□□ 1.67
GMDS-204ENST00000476972 PHACTR3Q96KR7 559 aa25.47■■□□□ 1.67
GMDS-204ENST00000476972 SIPA1L3O60292 1781 aaPredicted RBP25.46■■□□□ 1.67
GMDS-204ENST00000476972 SLC39A6Q13433 755 aa25.46■■□□□ 1.67
GMDS-204ENST00000476972 PIM2Q9P1W9 311 aa25.45■■□□□ 1.66
GMDS-204ENST00000476972 UBR2Q8IWV8 1755 aa25.44■■□□□ 1.66
GMDS-204ENST00000476972 KCPQ6ZWJ8 1503 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms