RNA–Protein interactions for RNA: ENST00000475819.1

LMNB2-202, Transcript of lamin B2, humanhuman

TSL 5

Gene LMNB2, Length 885 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-202ENST00000475819 ATP10DQ9P241 1426 aa22.66■■□□□ 1.22
LMNB2-202ENST00000475819 PIGBQ92521 554 aa22.66■■□□□ 1.22
LMNB2-202ENST00000475819 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.65■■□□□ 1.22
LMNB2-202ENST00000475819 NCAPD2Q15021 1401 aa22.65■■□□□ 1.22
LMNB2-202ENST00000475819 LOC102724428A0A0B4J2F2 783 aa22.63■■□□□ 1.21
LMNB2-202ENST00000475819 TNNT2P45379 298 aaPredicted RBP22.63■■□□□ 1.21
LMNB2-202ENST00000475819 SIK1P57059 783 aa22.63■■□□□ 1.21
LMNB2-202ENST00000475819 SMIM5Q71RC9 77 aa22.63■■□□□ 1.21
LMNB2-202ENST00000475819 GNPATO15228 680 aa22.62■■□□□ 1.21
LMNB2-202ENST00000475819 ZNF526Q8TF50 670 aaPredicted RBP22.62■■□□□ 1.21
LMNB2-202ENST00000475819 IGSF1Q8N6C5 1336 aa22.61■■□□□ 1.21
LMNB2-202ENST00000475819 SSFA2P28290 1259 aa22.61■■□□□ 1.21
LMNB2-202ENST00000475819 AMIGO3Q86WK7 504 aa22.61■■□□□ 1.21
LMNB2-202ENST00000475819 LINC00116Q8NCU8 138 aa22.61■■□□□ 1.21
LMNB2-202ENST00000475819 EYA1Q99502 592 aa22.61■■□□□ 1.21
LMNB2-202ENST00000475819 GPBP1L1Q9HC44 474 aaPredicted RBP22.61■■□□□ 1.21
LMNB2-202ENST00000475819 ATP6V1AP38606 617 aa22.6■■□□□ 1.21
LMNB2-202ENST00000475819 IFNL2Q8IZJ0 200 aa22.6■■□□□ 1.21
LMNB2-202ENST00000475819 NKX1-1Q15270 411 aaPredicted RBP22.59■■□□□ 1.21
LMNB2-202ENST00000475819 PHKG2P15735 406 aa22.58■■□□□ 1.21
LMNB2-202ENST00000475819 PPP2R1AP30153 589 aa22.58■■□□□ 1.21
LMNB2-202ENST00000475819 ASAP1Q9ULH1 1129 aa22.58■■□□□ 1.21
LMNB2-202ENST00000475819 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.57■■□□□ 1.2
LMNB2-202ENST00000475819 POLKQ9UBT6 870 aa22.56■■□□□ 1.2
LMNB2-202ENST00000475819 ITPK1Q13572 414 aa22.55■■□□□ 1.2
LMNB2-202ENST00000475819 EIF4A2Q14240 407 aaKnown RBP22.55■■□□□ 1.2
LMNB2-202ENST00000475819 MRS2Q9HD23 443 aa22.54■■□□□ 1.2
LMNB2-202ENST00000475819 CICQ96RK0 1608 aaPredicted RBP22.53■■□□□ 1.2
LMNB2-202ENST00000475819 RBM42Q9BTD8 480 aaKnown RBP22.53■■□□□ 1.2
LMNB2-202ENST00000475819 ADCY9O60503 1353 aa22.52■■□□□ 1.2
LMNB2-202ENST00000475819 MMP10P09238 476 aa22.52■■□□□ 1.2
LMNB2-202ENST00000475819 ATG3Q9NT62 314 aa22.51■■□□□ 1.19
LMNB2-202ENST00000475819 RTCBQ9Y3I0 505 aaKnown RBP22.51■■□□□ 1.19
LMNB2-202ENST00000475819 HSP90AB1P08238 724 aaKnown RBP22.5■■□□□ 1.19
LMNB2-202ENST00000475819 COL5A3P25940 1745 aaPredicted RBP22.5■■□□□ 1.19
LMNB2-202ENST00000475819 N4BP2Q86UW6 1770 aaPredicted RBP22.5■■□□□ 1.19
LMNB2-202ENST00000475819 KDRP35968 1356 aa22.5■■□□□ 1.19
LMNB2-202ENST00000475819 PLEKHG2Q9H7P9 1386 aa22.49■■□□□ 1.19
LMNB2-202ENST00000475819 CEP350Q5VT06 3117 aa22.48■■□□□ 1.19
LMNB2-202ENST00000475819 ZNF530Q6P9A1 599 aaPredicted RBP22.48■■□□□ 1.19
LMNB2-202ENST00000475819 CFAP53Q96M91 514 aa22.48■■□□□ 1.19
LMNB2-202ENST00000475819 KIF13BQ9NQT8 1826 aa22.47■■□□□ 1.19
LMNB2-202ENST00000475819 PXDNLA1KZ92 1463 aa22.47■■□□□ 1.19
LMNB2-202ENST00000475819 ZNF831Q5JPB2 1677 aa22.47■■□□□ 1.19
LMNB2-202ENST00000475819 PLEKHO1Q53GL0 409 aaPredicted RBP22.47■■□□□ 1.19
LMNB2-202ENST00000475819 TRAPPC3LQ5T215 181 aa22.47■■□□□ 1.19
LMNB2-202ENST00000475819 DCAF5Q96JK2 942 aa22.47■■□□□ 1.19
LMNB2-202ENST00000475819 C4AP0C0L4 1744 aa22.46■■□□□ 1.19
LMNB2-202ENST00000475819 CABP4P57796 275 aa22.46■■□□□ 1.19
LMNB2-202ENST00000475819 C1orf141Q5JVX7 400 aa22.46■■□□□ 1.19
LMNB2-202ENST00000475819 ERVV-2B6SEH9 535 aa22.45■■□□□ 1.18
LMNB2-202ENST00000475819 MTHFSP49914 203 aa22.45■■□□□ 1.18
LMNB2-202ENST00000475819 CCDC184Q52MB2 194 aa22.45■■□□□ 1.18
LMNB2-202ENST00000475819 BCS1LQ9Y276 419 aa22.45■■□□□ 1.18
LMNB2-202ENST00000475819 KDM6AO15550 1401 aaPredicted RBP22.44■■□□□ 1.18
LMNB2-202ENST00000475819 COL3A1P02461 1466 aaPredicted RBP22.44■■□□□ 1.18
LMNB2-202ENST00000475819 RFC4P35249 363 aa22.44■■□□□ 1.18
LMNB2-202ENST00000475819 C10orf71Q711Q0 1435 aa22.44■■□□□ 1.18
LMNB2-202ENST00000475819 KIAA1551Q9HCM1 1747 aa22.44■■□□□ 1.18
LMNB2-202ENST00000475819 NLGN1Q8N2Q7 840 aa22.43■■□□□ 1.18
LMNB2-202ENST00000475819 CCDC87Q9NVE4 849 aa22.43■■□□□ 1.18
LMNB2-202ENST00000475819 CNTNAP4Q9C0A0 1308 aa22.42■■□□□ 1.18
LMNB2-202ENST00000475819 ADRA2BP18089 450 aa22.42■■□□□ 1.18
LMNB2-202ENST00000475819 AMOTQ4VCS5 1084 aa22.42■■□□□ 1.18
LMNB2-202ENST00000475819 PARP3Q9Y6F1 533 aa22.42■■□□□ 1.18
LMNB2-202ENST00000475819 PTCD1O75127 700 aaKnown RBP22.41■■□□□ 1.18
LMNB2-202ENST00000475819 HSPA6P17066 643 aa22.41■■□□□ 1.18
LMNB2-202ENST00000475819 ARHGEF1Q92888 912 aaKnown RBP22.4■■□□□ 1.18
LMNB2-202ENST00000475819 SLC4A9Q96Q91 983 aa22.4■■□□□ 1.18
LMNB2-202ENST00000475819 A0A0G2JLW4 131 aa22.39■■□□□ 1.17
LMNB2-202ENST00000475819 TGFB2P61812 414 aa22.39■■□□□ 1.17
LMNB2-202ENST00000475819 AEBP1Q8IUX7 1158 aa22.39■■□□□ 1.17
LMNB2-202ENST00000475819 FCHSD2O94868 740 aa22.38■■□□□ 1.17
LMNB2-202ENST00000475819 RC3H1Q5TC82 1133 aaKnown RBP22.38■■□□□ 1.17
LMNB2-202ENST00000475819 PNISRQ8TF01 805 aaKnown RBP22.38■■□□□ 1.17
LMNB2-202ENST00000475819 MYH14Q7Z406 1995 aaKnown RBP22.38■■□□□ 1.17
LMNB2-202ENST00000475819 TJP1Q07157 1748 aa22.37■■□□□ 1.17
LMNB2-202ENST00000475819 RPS6KA4O75676 772 aa22.37■■□□□ 1.17
LMNB2-202ENST00000475819 GYS1P13807 737 aa22.37■■□□□ 1.17
LMNB2-202ENST00000475819 WDR43Q15061 677 aaKnown RBP eCLIP22.37■■□□□ 1.17
LMNB2-202ENST00000475819 ARHGAP27Q6ZUM4 889 aa22.37■■□□□ 1.17
LMNB2-202ENST00000475819 BRCA1P38398 1863 aaKnown RBP22.37■■□□□ 1.17
LMNB2-202ENST00000475819 SULT6B1Q6IMI4 303 aa22.36■■□□□ 1.17
LMNB2-202ENST00000475819 SCN11AQ9UI33 1791 aa22.35■■□□□ 1.17
LMNB2-202ENST00000475819 DPEP1P16444 411 aa22.35■■□□□ 1.17
LMNB2-202ENST00000475819 CRKLP46109 303 aaKnown RBP22.35■■□□□ 1.17
LMNB2-202ENST00000475819 FAM9BQ8IZU0 186 aa22.35■■□□□ 1.17
LMNB2-202ENST00000475819 NUDCQ9Y266 331 aa22.35■■□□□ 1.17
LMNB2-202ENST00000475819 KIF3CO14782 793 aa22.33■■□□□ 1.17
LMNB2-202ENST00000475819 DIAPH1O60610 1272 aaKnown RBP22.33■■□□□ 1.17
LMNB2-202ENST00000475819 NFATC2IPQ8NCF5 419 aa22.33■■□□□ 1.17
LMNB2-202ENST00000475819 ARFGEF1Q9Y6D6 1849 aa22.33■■□□□ 1.16
LMNB2-202ENST00000475819 SRP68Q9UHB9 627 aaKnown RBP22.32■■□□□ 1.16
LMNB2-202ENST00000475819 VIRMAQ69YN4 1812 aaKnown RBP22.31■■□□□ 1.16
LMNB2-202ENST00000475819 USP42Q9H9J4 1324 aaKnown RBP22.31■■□□□ 1.16
LMNB2-202ENST00000475819 FKBP8Q14318 412 aa22.28■■□□□ 1.16
LMNB2-202ENST00000475819 C16orf71Q8IYS4 520 aaPredicted RBP22.28■■□□□ 1.16
LMNB2-202ENST00000475819 PIM2Q9P1W9 311 aa22.28■■□□□ 1.16
LMNB2-202ENST00000475819 ZPR1O75312 459 aa22.27■■□□□ 1.16
LMNB2-202ENST00000475819 TOMM70O94826 608 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms