RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 SCNN1DP51172 638 aa10.69□□□□□ -0.7
TM9SF3-204ENST00000475401 DPYDQ12882 1025 aa10.69□□□□□ -0.7
TM9SF3-204ENST00000475401 ELOAQ14241 798 aaKnown RBP10.69□□□□□ -0.7
TM9SF3-204ENST00000475401 SLC27A3Q5K4L6 730 aa10.69□□□□□ -0.7
TM9SF3-204ENST00000475401 XAGE2Q96GT9 111 aa10.69□□□□□ -0.7
TM9SF3-204ENST00000475401 SERTAD1Q9UHV2 236 aa10.69□□□□□ -0.7
TM9SF3-204ENST00000475401 KIAA1024Q9UPX6 916 aa10.69□□□□□ -0.7
TM9SF3-204ENST00000475401 TTLL8A6PVC2 850 aa10.68□□□□□ -0.7
TM9SF3-204ENST00000475401 GPC1P35052 558 aa10.68□□□□□ -0.7
TM9SF3-204ENST00000475401 TLR1Q15399 786 aa10.68□□□□□ -0.7
TM9SF3-204ENST00000475401 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.68□□□□□ -0.7
TM9SF3-204ENST00000475401 ZNF358Q9NW07 568 aa10.68□□□□□ -0.7
TM9SF3-204ENST00000475401 TMEM229AB2RXF0 380 aa10.67□□□□□ -0.7
TM9SF3-204ENST00000475401 IL2RAP01589 272 aa10.67□□□□□ -0.7
TM9SF3-204ENST00000475401 DACH1Q9UI36 760 aa10.67□□□□□ -0.7
TM9SF3-204ENST00000475401 SFI1A8K8P3 1242 aa10.66□□□□□ -0.7
TM9SF3-204ENST00000475401 M0R2N6 131 aa10.66□□□□□ -0.7
TM9SF3-204ENST00000475401 MAN1A2O60476 641 aa10.66□□□□□ -0.7
TM9SF3-204ENST00000475401 STAU1O95793 577 aaKnown RBP10.66□□□□□ -0.7
TM9SF3-204ENST00000475401 CENPCQ03188 943 aa10.66□□□□□ -0.7
TM9SF3-204ENST00000475401 PDE4CQ08493 712 aa10.66□□□□□ -0.7
TM9SF3-204ENST00000475401 HINFPQ9BQA5 517 aa10.66□□□□□ -0.7
TM9SF3-204ENST00000475401 CTSOP43234 321 aaPredicted RBP10.65□□□□□ -0.7
TM9SF3-204ENST00000475401 RNF144AP50876 292 aaPredicted RBP10.65□□□□□ -0.7
TM9SF3-204ENST00000475401 SMTNP53814 917 aa10.65□□□□□ -0.7
TM9SF3-204ENST00000475401 TMEM214Q6NUQ4 689 aaKnown RBP10.65□□□□□ -0.7
TM9SF3-204ENST00000475401 ZSCAN10Q96SZ4 725 aaPredicted RBP10.65□□□□□ -0.7
TM9SF3-204ENST00000475401 NBPF15Q8N660 670 aa10.64□□□□□ -0.71
TM9SF3-204ENST00000475401 SLC4A9Q96Q91 983 aa10.64□□□□□ -0.71
TM9SF3-204ENST00000475401 SOS2Q07890 1332 aaPredicted RBP10.63□□□□□ -0.71
TM9SF3-204ENST00000475401 A6NJY4 79 aa10.63□□□□□ -0.71
TM9SF3-204ENST00000475401 GNASQ5JWF2 1037 aa10.63□□□□□ -0.71
TM9SF3-204ENST00000475401 FIGNL2A6NMB9 653 aa10.62□□□□□ -0.71
TM9SF3-204ENST00000475401 C11orf95C9JLR9 678 aaPredicted RBP10.62□□□□□ -0.71
TM9SF3-204ENST00000475401 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.62□□□□□ -0.717e-6■■□□□ 14.4
TM9SF3-204ENST00000475401 LYSMD3Q7Z3D4 306 aa10.62□□□□□ -0.71
TM9SF3-204ENST00000475401 TSEN2Q8NCE0 465 aaKnown RBP10.62□□□□□ -0.71
TM9SF3-204ENST00000475401 TRIM47Q96LD4 638 aa10.62□□□□□ -0.71
TM9SF3-204ENST00000475401 ARXQ96QS3 562 aa10.62□□□□□ -0.71
TM9SF3-204ENST00000475401 GMPR2Q9P2T1 348 aaKnown RBP10.62□□□□□ -0.71
TM9SF3-204ENST00000475401 ZMIZ1Q9ULJ6 1067 aa10.62□□□□□ -0.71
TM9SF3-204ENST00000475401 CHMP3Q9Y3E7 222 aa10.62□□□□□ -0.71
TM9SF3-204ENST00000475401 SWI5Q1ZZU3 235 aa10.61□□□□□ -0.71
TM9SF3-204ENST00000475401 RNF217Q8TC41 542 aa10.61□□□□□ -0.71
TM9SF3-204ENST00000475401 DKK1O94907 266 aa10.6□□□□□ -0.71
TM9SF3-204ENST00000475401 FOXD4L5Q5VV16 416 aaPredicted RBP10.6□□□□□ -0.71
TM9SF3-204ENST00000475401 PRICKLE2Q7Z3G6 844 aa10.6□□□□□ -0.71
TM9SF3-204ENST00000475401 TNS4Q8IZW8 715 aa10.6□□□□□ -0.71
TM9SF3-204ENST00000475401 STK32AQ8WU08 396 aa10.6□□□□□ -0.71
TM9SF3-204ENST00000475401 GRIP2Q9C0E4 1043 aa10.6□□□□□ -0.71
TM9SF3-204ENST00000475401 HRH3Q9Y5N1 445 aa10.6□□□□□ -0.71
TM9SF3-204ENST00000475401 CDK2AP1O14519 115 aa10.59□□□□□ -0.71
TM9SF3-204ENST00000475401 MTFR1Q15390 333 aa10.59□□□□□ -0.71
TM9SF3-204ENST00000475401 TMEM164Q5U3C3 297 aa10.59□□□□□ -0.71
TM9SF3-204ENST00000475401 FHDC1Q9C0D6 1143 aaPredicted RBP10.59□□□□□ -0.71
TM9SF3-204ENST00000475401 SCHIP1Q9P0W5 487 aaPredicted RBP10.59□□□□□ -0.71
TM9SF3-204ENST00000475401 USTQ9Y2C2 406 aa10.59□□□□□ -0.71
TM9SF3-204ENST00000475401 TAS1R3Q7RTX0 852 aa10.58□□□□□ -0.72
TM9SF3-204ENST00000475401 PPARGC1BQ86YN6 1023 aaKnown RBP10.58□□□□□ -0.72
TM9SF3-204ENST00000475401 RHBDD1Q8TEB9 315 aa10.58□□□□□ -0.72
TM9SF3-204ENST00000475401 NIFKQ9BYG3 293 aaKnown RBP10.58□□□□□ -0.72
TM9SF3-204ENST00000475401 DNMT3LQ9UJW3 386 aa10.57□□□□□ -0.72
TM9SF3-204ENST00000475401 LCE2BO14633 110 aa10.56□□□□□ -0.72
TM9SF3-204ENST00000475401 SLC9A9Q8IVB4 645 aa10.56□□□□□ -0.72
TM9SF3-204ENST00000475401 RETREG2Q8NC44 543 aa10.56□□□□□ -0.72
TM9SF3-204ENST00000475401 GAS2L2Q8NHY3 880 aa10.56□□□□□ -0.72
TM9SF3-204ENST00000475401 CABP1Q9NZU7 370 aa10.56□□□□□ -0.72
TM9SF3-204ENST00000475401 SPATA31C2B4DYI2 1134 aa10.55□□□□□ -0.72
TM9SF3-204ENST00000475401 POU4F2Q12837 409 aa10.55□□□□□ -0.72
TM9SF3-204ENST00000475401 WDR44Q5JSH3 913 aa10.55□□□□□ -0.72
TM9SF3-204ENST00000475401 SCG3Q8WXD2 468 aaKnown RBP10.55□□□□□ -0.72
TM9SF3-204ENST00000475401 PPP1R12BO60237 982 aaPredicted RBP10.54□□□□□ -0.72
TM9SF3-204ENST00000475401 EPHA4P54764 986 aa10.54□□□□□ -0.72
TM9SF3-204ENST00000475401 NBPF10Q6P3W6 841 aaKnown RBP10.54□□□□□ -0.72
TM9SF3-204ENST00000475401 TSPAN10Q9H1Z9 355 aaPredicted RBP10.54□□□□□ -0.72
TM9SF3-204ENST00000475401 ZNF232Q9UNY5 417 aa10.54□□□□□ -0.72
TM9SF3-204ENST00000475401 ATAD2Q6PL18 1390 aa10.53□□□□□ -0.72
TM9SF3-204ENST00000475401 SNRPBP14678 240 aaKnown RBP10.53□□□□□ -0.72
TM9SF3-204ENST00000475401 RHOQP17081 205 aa10.53□□□□□ -0.72
TM9SF3-204ENST00000475401 PSMA6P60900 246 aaKnown RBP10.53□□□□□ -0.72
TM9SF3-204ENST00000475401 FOXK2Q01167 660 aa10.53□□□□□ -0.72
TM9SF3-204ENST00000475401 ZNF787Q6DD87 383 aa10.53□□□□□ -0.72
TM9SF3-204ENST00000475401 B4GALNT3Q6L9W6 998 aa10.53□□□□□ -0.72
TM9SF3-204ENST00000475401 CHMP7Q8WUX9 453 aaPredicted RBP10.53□□□□□ -0.72
TM9SF3-204ENST00000475401 CLP1Q92989 425 aaKnown RBP10.53□□□□□ -0.72
TM9SF3-204ENST00000475401 VTI1AQ96AJ9 217 aa10.53□□□□□ -0.72
TM9SF3-204ENST00000475401 SOBPA7XYQ1 873 aa10.52□□□□□ -0.73
TM9SF3-204ENST00000475401 IGFBP4P22692 258 aa10.52□□□□□ -0.73
TM9SF3-204ENST00000475401 PHKA2P46019 1235 aa10.52□□□□□ -0.73
TM9SF3-204ENST00000475401 NBPF1Q3BBV0 1214 aa10.52□□□□□ -0.73
TM9SF3-204ENST00000475401 TBCELQ5QJ74 424 aa10.52□□□□□ -0.73
TM9SF3-204ENST00000475401 TIMMDC1Q9NPL8 285 aa10.52□□□□□ -0.73
TM9SF3-204ENST00000475401 IQSEC3Q9UPP2 1182 aaPredicted RBP10.52□□□□□ -0.73
TM9SF3-204ENST00000475401 SERTM1A2A2V5 107 aa10.51□□□□□ -0.73
TM9SF3-204ENST00000475401 PRMT3O60678 531 aa10.51□□□□□ -0.73
TM9SF3-204ENST00000475401 LGR5O75473 907 aa10.51□□□□□ -0.73
TM9SF3-204ENST00000475401 PLA2G4AP47712 749 aa10.51□□□□□ -0.73
TM9SF3-204ENST00000475401 FAM69CQ0P6D2 419 aa10.51□□□□□ -0.73
TM9SF3-204ENST00000475401 C4orf17Q53FE4 359 aa10.51□□□□□ -0.73
TM9SF3-204ENST00000475401 AIDAQ96BJ3 306 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms