RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 EXOC5O00471 708 aa8.29□□□□□ -1.08
CPSF7-210ENST00000474684 PLSCR1O15162 318 aa8.29□□□□□ -1.08
CPSF7-210ENST00000474684 TXNRD1Q16881 649 aa8.29□□□□□ -1.08
CPSF7-210ENST00000474684 CARD14Q9BXL6 1004 aa8.29□□□□□ -1.08
CPSF7-210ENST00000474684 FLT4P35916 1363 aa8.28□□□□□ -1.08
CPSF7-210ENST00000474684 C11orf95C9JLR9 678 aaPredicted RBP8.28□□□□□ -1.08
CPSF7-210ENST00000474684 PLCG2P16885 1265 aa8.28□□□□□ -1.08
CPSF7-210ENST00000474684 AMPHP49418 695 aa8.28□□□□□ -1.08
CPSF7-210ENST00000474684 ZNF827Q17R98 1081 aa8.28□□□□□ -1.08
CPSF7-210ENST00000474684 NBPF14Q5TI25 921 aa8.28□□□□□ -1.08
CPSF7-210ENST00000474684 RASEFQ8IZ41 740 aa8.28□□□□□ -1.08
CPSF7-210ENST00000474684 PCDHB13Q9Y5F0 798 aa8.28□□□□□ -1.08
CPSF7-210ENST00000474684 EMILIN1Q9Y6C2 1016 aa8.28□□□□□ -1.08
CPSF7-210ENST00000474684 COL5A3P25940 1745 aaPredicted RBP8.28□□□□□ -1.08
CPSF7-210ENST00000474684 CLSPNQ9HAW4 1339 aa8.28□□□□□ -1.08
CPSF7-210ENST00000474684 INSRP06213 1382 aa8.27□□□□□ -1.09
CPSF7-210ENST00000474684 C4BP0C0L5 1744 aa8.27□□□□□ -1.09
CPSF7-210ENST00000474684 HSP90AB2PQ58FF8 381 aa8.27□□□□□ -1.09
CPSF7-210ENST00000474684 NBPF6Q5VWK0 638 aa8.27□□□□□ -1.09
CPSF7-210ENST00000474684 NBPF4Q96M43 638 aa8.27□□□□□ -1.09
CPSF7-210ENST00000474684 SCN11AQ9UI33 1791 aa8.27□□□□□ -1.09
CPSF7-210ENST00000474684 SMG6Q86US8 1419 aaKnown RBP8.27□□□□□ -1.09
CPSF7-210ENST00000474684 C4AP0C0L4 1744 aa8.26□□□□□ -1.09
CPSF7-210ENST00000474684 ZBTB7AO95365 584 aa8.26□□□□□ -1.09
CPSF7-210ENST00000474684 MIER1Q8N108 512 aa8.26□□□□□ -1.09
CPSF7-210ENST00000474684 LRRC4BQ9NT99 713 aa8.26□□□□□ -1.09
CPSF7-210ENST00000474684 MYH14Q7Z406 1995 aaKnown RBP8.26□□□□□ -1.09
CPSF7-210ENST00000474684 UTRNP46939 3433 aa8.25□□□□□ -1.09
CPSF7-210ENST00000474684 HSPA5P11021 654 aaKnown RBP8.25□□□□□ -1.09
CPSF7-210ENST00000474684 PTGER2P43116 358 aa8.25□□□□□ -1.09
CPSF7-210ENST00000474684 KCNQ4P56696 695 aa8.25□□□□□ -1.09
CPSF7-210ENST00000474684 SLC15A2Q16348 729 aa8.25□□□□□ -1.09
CPSF7-210ENST00000474684 DDX54Q8TDD1 881 aaKnown RBP8.25□□□□□ -1.09
CPSF7-210ENST00000474684 SPON1Q9HCB6 807 aa8.25□□□□□ -1.09
CPSF7-210ENST00000474684 KIF24Q5T7B8 1368 aa8.24□□□□□ -1.09
CPSF7-210ENST00000474684 POLR3GLQ9BT43 218 aa8.24□□□□□ -1.09
CPSF7-210ENST00000474684 STK32BQ9NY57 414 aa8.24□□□□□ -1.09
CPSF7-210ENST00000474684 ZBTB47Q9UFB7 747 aaPredicted RBP8.24□□□□□ -1.09
CPSF7-210ENST00000474684 TJP1Q07157 1748 aa8.23□□□□□ -1.09
CPSF7-210ENST00000474684 KIAA1551Q9HCM1 1747 aa8.23□□□□□ -1.09
CPSF7-210ENST00000474684 SLC24A1O60721 1099 aa8.23□□□□□ -1.09
CPSF7-210ENST00000474684 CDCA8Q53HL2 280 aa8.23□□□□□ -1.09
CPSF7-210ENST00000474684 ZCRB1Q8TBF4 217 aaKnown RBP8.23□□□□□ -1.09
CPSF7-210ENST00000474684 SYTL4Q96C24 671 aaPredicted RBP8.23□□□□□ -1.09
CPSF7-210ENST00000474684 TIMELESSQ9UNS1 1208 aa8.23□□□□□ -1.09
CPSF7-210ENST00000474684 PNPLA7Q6ZV29 1317 aa8.23□□□□□ -1.09
CPSF7-210ENST00000474684 ZNF831Q5JPB2 1677 aa8.22□□□□□ -1.09
CPSF7-210ENST00000474684 CYP27B1O15528 508 aa8.22□□□□□ -1.09
CPSF7-210ENST00000474684 PRIM1P49642 420 aaKnown RBP8.22□□□□□ -1.09
CPSF7-210ENST00000474684 PPP1R1BQ9UD71 204 aaPredicted RBP8.22□□□□□ -1.09
CPSF7-210ENST00000474684 GOLGB1Q14789 3259 aaKnown RBP8.22□□□□□ -1.09
CPSF7-210ENST00000474684 CICQ96RK0 1608 aaPredicted RBP8.21□□□□□ -1.09
CPSF7-210ENST00000474684 IRX5P78411 483 aaPredicted RBP8.21□□□□□ -1.1
CPSF7-210ENST00000474684 CCER1Q8TC90 406 aaPredicted RBP8.21□□□□□ -1.1
CPSF7-210ENST00000474684 RAPGEF4Q8WZA2 1011 aa8.21□□□□□ -1.1
CPSF7-210ENST00000474684 TMEM106CQ9BVX2 250 aa8.21□□□□□ -1.1
CPSF7-210ENST00000474684 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.21□□□□□ -1.1
CPSF7-210ENST00000474684 KIF13BQ9NQT8 1826 aa8.21□□□□□ -1.1
CPSF7-210ENST00000474684 CGNL1Q0VF96 1302 aa8.21□□□□□ -1.1
CPSF7-210ENST00000474684 PCDH11XQ9BZA7 1347 aa8.21□□□□□ -1.1
CPSF7-210ENST00000474684 PCDH11YQ9BZA8 1340 aa8.21□□□□□ -1.1
CPSF7-210ENST00000474684 BRCA1P38398 1863 aaKnown RBP8.21□□□□□ -1.1
CPSF7-210ENST00000474684 PPM1GO15355 546 aaPredicted RBP8.2□□□□□ -1.1
CPSF7-210ENST00000474684 TATP17735 454 aaPredicted RBP8.2□□□□□ -1.1
CPSF7-210ENST00000474684 TNNT2P45379 298 aaPredicted RBP8.2□□□□□ -1.1
CPSF7-210ENST00000474684 EIF4G2P78344 907 aaKnown RBP eCLIP8.2□□□□□ -1.1
CPSF7-210ENST00000474684 MTFR1LQ9H019 292 aa8.2□□□□□ -1.1
CPSF7-210ENST00000474684 OCEL1Q9H607 264 aa8.2□□□□□ -1.1
CPSF7-210ENST00000474684 POLKQ9UBT6 870 aa8.2□□□□□ -1.1
CPSF7-210ENST00000474684 WASHC2AQ641Q2 1341 aa8.2□□□□□ -1.1
CPSF7-210ENST00000474684 ADAMTS7Q9UKP4 1686 aa8.2□□□□□ -1.1
CPSF7-210ENST00000474684 PALLDQ8WX93 1383 aa8.2□□□□□ -1.1
CPSF7-210ENST00000474684 SIPA1L3O60292 1781 aaPredicted RBP8.2□□□□□ -1.1
CPSF7-210ENST00000474684 N4BP2Q86UW6 1770 aaPredicted RBP8.2□□□□□ -1.1
CPSF7-210ENST00000474684 UBR2Q8IWV8 1755 aa8.2□□□□□ -1.1
CPSF7-210ENST00000474684 EIF4A2Q14240 407 aaKnown RBP8.19□□□□□ -1.1
CPSF7-210ENST00000474684 AMIGO3Q86WK7 504 aa8.19□□□□□ -1.1
CPSF7-210ENST00000474684 EYA1Q99502 592 aa8.19□□□□□ -1.1
CPSF7-210ENST00000474684 FHDC1Q9C0D6 1143 aaPredicted RBP8.19□□□□□ -1.1
CPSF7-210ENST00000474684 CCNL1Q9UK58 526 aaPredicted RBP8.19□□□□□ -1.1
CPSF7-210ENST00000474684 KDM6AO15550 1401 aaPredicted RBP8.19□□□□□ -1.1
CPSF7-210ENST00000474684 SLC27A3Q5K4L6 730 aa8.18□□□□□ -1.1
CPSF7-210ENST00000474684 IFNL1Q8IU54 200 aa8.18□□□□□ -1.1
CPSF7-210ENST00000474684 PANK3Q9H999 370 aa8.18□□□□□ -1.1
CPSF7-210ENST00000474684 KIF7Q2M1P5 1343 aa8.18□□□□□ -1.1
CPSF7-210ENST00000474684 IGSF1Q8N6C5 1336 aa8.18□□□□□ -1.1
CPSF7-210ENST00000474684 KDRP35968 1356 aa8.18□□□□□ -1.1
CPSF7-210ENST00000474684 MAP3K5Q99683 1374 aa8.18□□□□□ -1.1
CPSF7-210ENST00000474684 COL3A1P02461 1466 aaPredicted RBP8.18□□□□□ -1.1
CPSF7-210ENST00000474684 AEBP1Q8IUX7 1158 aa8.17□□□□□ -1.1
CPSF7-210ENST00000474684 AFDNP55196 1824 aaKnown RBP8.17□□□□□ -1.1
CPSF7-210ENST00000474684 DLG5Q8TDM6 1919 aa8.17□□□□□ -1.1
CPSF7-210ENST00000474684 MSL1Q68DK7 614 aa8.16□□□□□ -1.1
CPSF7-210ENST00000474684 MPRIPQ6WCQ1 1025 aa8.16□□□□□ -1.1
CPSF7-210ENST00000474684 SMIM5Q71RC9 77 aa8.16□□□□□ -1.1
CPSF7-210ENST00000474684 SYT17Q9BSW7 474 aa8.16□□□□□ -1.1
CPSF7-210ENST00000474684 MRC1P22897 1456 aa8.15□□□□□ -1.1
CPSF7-210ENST00000474684 PHKG2P15735 406 aa8.15□□□□□ -1.1
CPSF7-210ENST00000474684 COL23A1Q86Y22 540 aaPredicted RBP8.15□□□□□ -1.1
CPSF7-210ENST00000474684 KLHL34Q8N239 644 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms