RNA–Protein interactions for RNA: ENST00000473573.5

COL1A2-206, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 828 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-206ENST00000473573 IL13P35225 146 aa22.11■■□□□ 1.13
COL1A2-206ENST00000473573 CNGB1Q14028 1251 aaPredicted RBP22.11■■□□□ 1.13
COL1A2-206ENST00000473573 CC2D1BQ5T0F9 858 aaKnown RBP22.11■■□□□ 1.13
COL1A2-206ENST00000473573 DCAF5Q96JK2 942 aa22.11■■□□□ 1.13
COL1A2-206ENST00000473573 PLEKHG2Q9H7P9 1386 aa22.11■■□□□ 1.13
COL1A2-206ENST00000473573 ERVV-2B6SEH9 535 aa22.1■■□□□ 1.13
COL1A2-206ENST00000473573 HSP90AB1P08238 724 aaKnown RBP22.1■■□□□ 1.13
COL1A2-206ENST00000473573 AMOTQ4VCS5 1084 aa22.1■■□□□ 1.13
COL1A2-206ENST00000473573 UBR3Q6ZT12 1888 aa22.09■■□□□ 1.13
COL1A2-206ENST00000473573 KDM6AO15550 1401 aaPredicted RBP22.09■■□□□ 1.13
COL1A2-206ENST00000473573 MTHFSP49914 203 aa22.09■■□□□ 1.13
COL1A2-206ENST00000473573 C1orf141Q5JVX7 400 aa22.09■■□□□ 1.13
COL1A2-206ENST00000473573 RBM42Q9BTD8 480 aaKnown RBP22.09■■□□□ 1.13
COL1A2-206ENST00000473573 GNPATO15228 680 aa22.08■■□□□ 1.13
COL1A2-206ENST00000473573 PER1O15534 1290 aaPredicted RBP22.07■■□□□ 1.12
COL1A2-206ENST00000473573 CABP4P57796 275 aa22.07■■□□□ 1.12
COL1A2-206ENST00000473573 SSFA2P28290 1259 aa22.06■■□□□ 1.12
COL1A2-206ENST00000473573 KDRP35968 1356 aa22.05■■□□□ 1.12
COL1A2-206ENST00000473573 SLC4A9Q96Q91 983 aa22.05■■□□□ 1.12
COL1A2-206ENST00000473573 CHD4Q14839 1912 aa22.04■■□□□ 1.12
COL1A2-206ENST00000473573 HMOX1P09601 288 aa22.04■■□□□ 1.12
COL1A2-206ENST00000473573 ZNF784Q8NCA9 323 aaPredicted RBP22.04■■□□□ 1.12
COL1A2-206ENST00000473573 PTCD1O75127 700 aaKnown RBP22.02■■□□□ 1.12
COL1A2-206ENST00000473573 NFATC2IPQ8NCF5 419 aa22.02■■□□□ 1.12
COL1A2-206ENST00000473573 YBX3P16989 372 aaKnown RBP eCLIP22.01■■□□□ 1.11
COL1A2-206ENST00000473573 CD2APQ9Y5K6 639 aa22.01■■□□□ 1.11
COL1A2-206ENST00000473573 DIAPH1O60610 1272 aaKnown RBP21.99■■□□□ 1.11
COL1A2-206ENST00000473573 RTCBQ9Y3I0 505 aaKnown RBP21.99■■□□□ 1.11
COL1A2-206ENST00000473573 TRAPPC3LQ5T215 181 aa21.98■■□□□ 1.11
COL1A2-206ENST00000473573 AKAP4Q5JQC9 854 aa21.97■■□□□ 1.11
COL1A2-206ENST00000473573 LGR6Q9HBX8 967 aa21.97■■□□□ 1.11
COL1A2-206ENST00000473573 WWC3Q9ULE0 1092 aa21.97■■□□□ 1.11
COL1A2-206ENST00000473573 ZNF831Q5JPB2 1677 aa21.95■■□□□ 1.1
COL1A2-206ENST00000473573 COL5A3P25940 1745 aaPredicted RBP21.95■■□□□ 1.1
COL1A2-206ENST00000473573 SCN11AQ9UI33 1791 aa21.95■■□□□ 1.1
COL1A2-206ENST00000473573 GRIN3BO60391 1043 aa21.95■■□□□ 1.1
COL1A2-206ENST00000473573 MMP10P09238 476 aa21.95■■□□□ 1.1
COL1A2-206ENST00000473573 RC3H1Q5TC82 1133 aaKnown RBP21.95■■□□□ 1.1
COL1A2-206ENST00000473573 ARHGEF1Q92888 912 aaKnown RBP21.95■■□□□ 1.1
COL1A2-206ENST00000473573 CNTNAP4Q9C0A0 1308 aa21.95■■□□□ 1.1
COL1A2-206ENST00000473573 MTHFSDQ2M296 383 aaKnown RBP21.94■■□□□ 1.1
COL1A2-206ENST00000473573 U2SURPO15042 1029 aaKnown RBP21.93■■□□□ 1.1
COL1A2-206ENST00000473573 RPS6KA4O75676 772 aa21.93■■□□□ 1.1
COL1A2-206ENST00000473573 NPC1L1Q9UHC9 1359 aa21.93■■□□□ 1.1
COL1A2-206ENST00000473573 MYH14Q7Z406 1995 aaKnown RBP21.92■■□□□ 1.1
COL1A2-206ENST00000473573 RFC4P35249 363 aa21.92■■□□□ 1.1
COL1A2-206ENST00000473573 SLC52A2Q9HAB3 445 aa21.92■■□□□ 1.1
COL1A2-206ENST00000473573 RNMTO43148 476 aaKnown RBP21.91■■□□□ 1.1
COL1A2-206ENST00000473573 ADRA2BP18089 450 aa21.91■■□□□ 1.1
COL1A2-206ENST00000473573 CRKLP46109 303 aaKnown RBP21.91■■□□□ 1.1
COL1A2-206ENST00000473573 COL3A1P02461 1466 aaPredicted RBP21.9■■□□□ 1.1
COL1A2-206ENST00000473573 SLC39A6Q13433 755 aa21.9■■□□□ 1.1
COL1A2-206ENST00000473573 NLGN1Q8N2Q7 840 aa21.9■■□□□ 1.1
COL1A2-206ENST00000473573 GYS1P13807 737 aa21.89■■□□□ 1.09
COL1A2-206ENST00000473573 TJP1Q07157 1748 aa21.89■■□□□ 1.09
COL1A2-206ENST00000473573 DNAJC10Q8IXB1 793 aa21.88■■□□□ 1.09
COL1A2-206ENST00000473573 CICQ96RK0 1608 aaPredicted RBP21.88■■□□□ 1.09
COL1A2-206ENST00000473573 VIRMAQ69YN4 1812 aaKnown RBP21.87■■□□□ 1.09
COL1A2-206ENST00000473573 SRP68Q9UHB9 627 aaKnown RBP21.87■■□□□ 1.09
COL1A2-206ENST00000473573 C4AP0C0L4 1744 aa21.86■■□□□ 1.09
COL1A2-206ENST00000473573 MRC1P22897 1456 aa21.86■■□□□ 1.09
COL1A2-206ENST00000473573 INTS5Q6P9B9 1019 aaKnown RBP21.86■■□□□ 1.09
COL1A2-206ENST00000473573 CCDC87Q9NVE4 849 aa21.84■■□□□ 1.09
COL1A2-206ENST00000473573 PARP3Q9Y6F1 533 aa21.84■■□□□ 1.09
COL1A2-206ENST00000473573 CFAP53Q96M91 514 aa21.83■■□□□ 1.09
COL1A2-206ENST00000473573 ADAMTS7Q9UKP4 1686 aa21.82■■□□□ 1.08
COL1A2-206ENST00000473573 A0A0G2JLW4 131 aa21.82■■□□□ 1.08
COL1A2-206ENST00000473573 FKBP8Q14318 412 aa21.82■■□□□ 1.08
COL1A2-206ENST00000473573 PXDNLA1KZ92 1463 aa21.82■■□□□ 1.08
COL1A2-206ENST00000473573 USP42Q9H9J4 1324 aaKnown RBP21.81■■□□□ 1.08
COL1A2-206ENST00000473573 KCPQ6ZWJ8 1503 aa21.81■■□□□ 1.08
COL1A2-206ENST00000473573 CYP19A1P11511 503 aaPredicted RBP21.81■■□□□ 1.08
COL1A2-206ENST00000473573 GAS2L2Q8NHY3 880 aa21.81■■□□□ 1.08
COL1A2-206ENST00000473573 C10orf71Q711Q0 1435 aa21.8■■□□□ 1.08
COL1A2-206ENST00000473573 N4BP2Q86UW6 1770 aaPredicted RBP21.8■■□□□ 1.08
COL1A2-206ENST00000473573 GNAT3A8MTJ3 354 aa21.8■■□□□ 1.08
COL1A2-206ENST00000473573 IL17REQ8NFR9 667 aa21.8■■□□□ 1.08
COL1A2-206ENST00000473573 KIF13BQ9NQT8 1826 aa21.8■■□□□ 1.08
COL1A2-206ENST00000473573 GIGYF1O75420 1035 aaPredicted RBP21.79■■□□□ 1.08
COL1A2-206ENST00000473573 PPP2R1AP30153 589 aa21.79■■□□□ 1.08
COL1A2-206ENST00000473573 PRKAR2BP31323 418 aa21.79■■□□□ 1.08
COL1A2-206ENST00000473573 C1QTNF8P60827 252 aa21.79■■□□□ 1.08
COL1A2-206ENST00000473573 TGFB2P61812 414 aa21.79■■□□□ 1.08
COL1A2-206ENST00000473573 TEFQ10587 303 aa21.79■■□□□ 1.08
COL1A2-206ENST00000473573 PHACTR3Q96KR7 559 aa21.79■■□□□ 1.08
COL1A2-206ENST00000473573 SOS1Q07889 1333 aaPredicted RBP21.79■■□□□ 1.08
COL1A2-206ENST00000473573 KIAA1551Q9HCM1 1747 aa21.78■■□□□ 1.08
COL1A2-206ENST00000473573 DPEP1P16444 411 aa21.78■■□□□ 1.08
COL1A2-206ENST00000473573 DDR1Q08345 913 aa21.78■■□□□ 1.08
COL1A2-206ENST00000473573 TTC5Q8N0Z6 440 aa21.78■■□□□ 1.08
COL1A2-206ENST00000473573 BCS1LQ9Y276 419 aa21.78■■□□□ 1.08
COL1A2-206ENST00000473573 ZBTB1Q9Y2K1 713 aa21.78■■□□□ 1.08
COL1A2-206ENST00000473573 ATP10DQ9P241 1426 aa21.78■■□□□ 1.08
COL1A2-206ENST00000473573 ZPR1O75312 459 aa21.77■■□□□ 1.08
COL1A2-206ENST00000473573 USPL1Q5W0Q7 1092 aa21.77■■□□□ 1.08
COL1A2-206ENST00000473573 RSPH6AQ9H0K4 717 aa21.77■■□□□ 1.08
COL1A2-206ENST00000473573 U2AF1L5P0DN76 240 aaPredicted RBP21.76■■□□□ 1.07
COL1A2-206ENST00000473573 U2AF1Q01081 240 aaKnown RBP eCLIP21.76■■□□□ 1.07
COL1A2-206ENST00000473573 ZNF526Q8TF50 670 aaPredicted RBP21.76■■□□□ 1.07
COL1A2-206ENST00000473573 NUDCQ9Y266 331 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms