RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 WASHC2AQ641Q2 1341 aa17.6■□□□□ 0.41
TRAF4-209ENST00000473421 PXDNLA1KZ92 1463 aa17.6■□□□□ 0.41
TRAF4-209ENST00000473421 A0A0G2JLW4 131 aa17.59■□□□□ 0.41
TRAF4-209ENST00000473421 KDRP35968 1356 aa17.57■□□□□ 0.4
TRAF4-209ENST00000473421 EIF4A2Q14240 407 aaKnown RBP17.57■□□□□ 0.4
TRAF4-209ENST00000473421 CICQ96RK0 1608 aaPredicted RBP17.57■□□□□ 0.4
TRAF4-209ENST00000473421 KIF13BQ9NQT8 1826 aa17.56■□□□□ 0.4
TRAF4-209ENST00000473421 TNNT2P45379 298 aaPredicted RBP17.56■□□□□ 0.4
TRAF4-209ENST00000473421 IFNL2Q8IZJ0 200 aa17.56■□□□□ 0.4
TRAF4-209ENST00000473421 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.56■□□□□ 0.43e-6■□□□□ 10.9
TRAF4-209ENST00000473421 ARHGEF1Q92888 912 aaKnown RBP17.55■□□□□ 0.4
TRAF4-209ENST00000473421 BCS1LQ9Y276 419 aa17.55■□□□□ 0.4
TRAF4-209ENST00000473421 MYH14Q7Z406 1995 aaKnown RBP17.54■□□□□ 0.4
TRAF4-209ENST00000473421 DPEP1P16444 411 aa17.54■□□□□ 0.4
TRAF4-209ENST00000473421 KCNA3P22001 575 aa17.54■□□□□ 0.4
TRAF4-209ENST00000473421 NMRK2Q9NPI5 230 aa17.54■□□□□ 0.4
TRAF4-209ENST00000473421 GYS1P13807 737 aa17.53■□□□□ 0.4
TRAF4-209ENST00000473421 DNAJC5GQ8N7S2 189 aa17.53■□□□□ 0.4
TRAF4-209ENST00000473421 RBM42Q9BTD8 480 aaKnown RBP17.53■□□□□ 0.4
TRAF4-209ENST00000473421 C10orf71Q711Q0 1435 aa17.53■□□□□ 0.4
TRAF4-209ENST00000473421 HMGB2P26583 209 aaKnown RBP17.52■□□□□ 0.4
TRAF4-209ENST00000473421 CDCA8Q53HL2 280 aa17.52■□□□□ 0.4
TRAF4-209ENST00000473421 TRAPPC3LQ5T215 181 aa17.52■□□□□ 0.4
TRAF4-209ENST00000473421 KDM6AO15550 1401 aaPredicted RBP17.51■□□□□ 0.39
TRAF4-209ENST00000473421 COL5A3P25940 1745 aaPredicted RBP17.51■□□□□ 0.39
TRAF4-209ENST00000473421 ARHGAP27Q6ZUM4 889 aa17.51■□□□□ 0.39
TRAF4-209ENST00000473421 RTCBQ9Y3I0 505 aaKnown RBP17.51■□□□□ 0.39
TRAF4-209ENST00000473421 TGFB2P61812 414 aa17.5■□□□□ 0.39
TRAF4-209ENST00000473421 HTRA3P83110 453 aa17.5■□□□□ 0.39
TRAF4-209ENST00000473421 SRP68Q9UHB9 627 aaKnown RBP17.5■□□□□ 0.39
TRAF4-209ENST00000473421 BRCA1P38398 1863 aaKnown RBP17.5■□□□□ 0.39
TRAF4-209ENST00000473421 C4AP0C0L4 1744 aa17.5■□□□□ 0.39
TRAF4-209ENST00000473421 AEBP1Q8IUX7 1158 aa17.49■□□□□ 0.39
TRAF4-209ENST00000473421 NLGN1Q8N2Q7 840 aa17.49■□□□□ 0.39
TRAF4-209ENST00000473421 RPS6KA4O75676 772 aa17.48■□□□□ 0.39
TRAF4-209ENST00000473421 RC3H1Q5TC82 1133 aaKnown RBP17.48■□□□□ 0.39
TRAF4-209ENST00000473421 POLR3GLQ9BT43 218 aa17.48■□□□□ 0.39
TRAF4-209ENST00000473421 ERVV-2B6SEH9 535 aa17.47■□□□□ 0.39
TRAF4-209ENST00000473421 PTCD1O75127 700 aaKnown RBP17.47■□□□□ 0.39
TRAF4-209ENST00000473421 TOMM70O94826 608 aa17.47■□□□□ 0.39
TRAF4-209ENST00000473421 FCHSD2O94868 740 aa17.47■□□□□ 0.39
TRAF4-209ENST00000473421 CNTNAP4Q9C0A0 1308 aa17.47■□□□□ 0.39
TRAF4-209ENST00000473421 ZNF831Q5JPB2 1677 aa17.46■□□□□ 0.39
TRAF4-209ENST00000473421 RFC4P35249 363 aa17.46■□□□□ 0.39
TRAF4-209ENST00000473421 DDR1Q08345 913 aa17.46■□□□□ 0.39
TRAF4-209ENST00000473421 FKBP8Q14318 412 aa17.46■□□□□ 0.39
TRAF4-209ENST00000473421 C9orf131Q5VYM1 1079 aa17.46■□□□□ 0.39
TRAF4-209ENST00000473421 DCAF5Q96JK2 942 aa17.46■□□□□ 0.39
TRAF4-209ENST00000473421 APLP1P51693 650 aa17.45■□□□□ 0.38
TRAF4-209ENST00000473421 ZNF530Q6P9A1 599 aaPredicted RBP17.45■□□□□ 0.38
TRAF4-209ENST00000473421 CHRNA5P30532 468 aa17.44■□□□□ 0.38
TRAF4-209ENST00000473421 CRKLP46109 303 aaKnown RBP17.44■□□□□ 0.38
TRAF4-209ENST00000473421 CABP4P57796 275 aa17.44■□□□□ 0.38
TRAF4-209ENST00000473421 NFATC2IPQ8NCF5 419 aa17.44■□□□□ 0.38
TRAF4-209ENST00000473421 CCDC87Q9NVE4 849 aa17.44■□□□□ 0.38
TRAF4-209ENST00000473421 ADRA2BP18089 450 aa17.43■□□□□ 0.38
TRAF4-209ENST00000473421 PARP3Q9Y6F1 533 aa17.43■□□□□ 0.38
TRAF4-209ENST00000473421 TJP1Q07157 1748 aa17.42■□□□□ 0.38
TRAF4-209ENST00000473421 PLEKHO1Q53GL0 409 aaPredicted RBP17.42■□□□□ 0.38
TRAF4-209ENST00000473421 INTS5Q6P9B9 1019 aaKnown RBP17.42■□□□□ 0.38
TRAF4-209ENST00000473421 ADAMTS7Q9UKP4 1686 aa17.42■□□□□ 0.38
TRAF4-209ENST00000473421 KCPQ6ZWJ8 1503 aa17.42■□□□□ 0.38
TRAF4-209ENST00000473421 MTHFSP49914 203 aa17.41■□□□□ 0.38
TRAF4-209ENST00000473421 PANK3Q9H999 370 aa17.41■□□□□ 0.38
TRAF4-209ENST00000473421 ARFGEF1Q9Y6D6 1849 aa17.41■□□□□ 0.38
TRAF4-209ENST00000473421 USP42Q9H9J4 1324 aaKnown RBP17.41■□□□□ 0.38
TRAF4-209ENST00000473421 PRELPP51888 382 aa17.4■□□□□ 0.38
TRAF4-209ENST00000473421 WDR90Q96KV7 1748 aa17.39■□□□□ 0.37
TRAF4-209ENST00000473421 HSP90AB1P08238 724 aaKnown RBP17.39■□□□□ 0.37
TRAF4-209ENST00000473421 TM4SF1P30408 202 aa17.39■□□□□ 0.37
TRAF4-209ENST00000473421 RRAGCQ9HB90 399 aa17.39■□□□□ 0.37
TRAF4-209ENST00000473421 PIM2Q9P1W9 311 aa17.39■□□□□ 0.37
TRAF4-209ENST00000473421 PCNTO95613 3336 aa17.39■□□□□ 0.37
TRAF4-209ENST00000473421 SBF1O95248 1867 aa17.38■□□□□ 0.37
TRAF4-209ENST00000473421 POLRMTO00411 1230 aaKnown RBP17.38■□□□□ 0.37
TRAF4-209ENST00000473421 SULT6B1Q6IMI4 303 aa17.38■□□□□ 0.37
TRAF4-209ENST00000473421 DNAJC10Q8IXB1 793 aa17.38■□□□□ 0.37
TRAF4-209ENST00000473421 RBM46Q8TBY0 533 aaKnown RBP17.38■□□□□ 0.37
TRAF4-209ENST00000473421 RNF181Q9P0P0 153 aa17.38■□□□□ 0.37
TRAF4-209ENST00000473421 DALRD3Q5D0E6 543 aaKnown RBP17.37■□□□□ 0.37
TRAF4-209ENST00000473421 COL13A1Q5TAT6 717 aaPredicted RBP17.37■□□□□ 0.37
TRAF4-209ENST00000473421 LGR6Q9HBX8 967 aa17.37■□□□□ 0.37
TRAF4-209ENST00000473421 PLEKHG2Q9H7P9 1386 aa17.37■□□□□ 0.37
TRAF4-209ENST00000473421 RASSF7Q02833 373 aa17.36■□□□□ 0.37
TRAF4-209ENST00000473421 AMOTQ4VCS5 1084 aa17.36■□□□□ 0.37
TRAF4-209ENST00000473421 USPL1Q5W0Q7 1092 aa17.36■□□□□ 0.37
TRAF4-209ENST00000473421 HSPA5P11021 654 aaKnown RBP17.35■□□□□ 0.37
TRAF4-209ENST00000473421 IL13P35225 146 aa17.35■□□□□ 0.37
TRAF4-209ENST00000473421 SLC39A6Q13433 755 aa17.35■□□□□ 0.37
TRAF4-209ENST00000473421 C1orf141Q5JVX7 400 aa17.34■□□□□ 0.37
TRAF4-209ENST00000473421 KLRG1Q96E93 195 aa17.34■□□□□ 0.37
TRAF4-209ENST00000473421 BCL2L12Q9HB09 334 aa17.34■□□□□ 0.37
TRAF4-209ENST00000473421 SCN11AQ9UI33 1791 aa17.34■□□□□ 0.37
TRAF4-209ENST00000473421 NFIXQ14938 502 aa17.33■□□□□ 0.36
TRAF4-209ENST00000473421 AFDNP55196 1824 aaKnown RBP17.33■□□□□ 0.36
TRAF4-209ENST00000473421 SOS1Q07889 1333 aaPredicted RBP17.32■□□□□ 0.36
TRAF4-209ENST00000473421 CYP19A1P11511 503 aaPredicted RBP17.32■□□□□ 0.36
TRAF4-209ENST00000473421 MORC1Q86VD1 984 aa17.32■□□□□ 0.36
TRAF4-209ENST00000473421 JMYQ8N9B5 988 aa17.32■□□□□ 0.36
TRAF4-209ENST00000473421 TRIM26Q12899 539 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms