RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 DCAF5Q96JK2 942 aa20.2■□□□□ 0.82
SDCCAG3-209ENST00000468963 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.19■□□□□ 0.82
SDCCAG3-209ENST00000468963 ATP6V1AP38606 617 aa20.19■□□□□ 0.82
SDCCAG3-209ENST00000468963 SULT6B1Q6IMI4 303 aa20.18■□□□□ 0.82
SDCCAG3-209ENST00000468963 ZNF530Q6P9A1 599 aaPredicted RBP20.18■□□□□ 0.82
SDCCAG3-209ENST00000468963 ZNF784Q8NCA9 323 aaPredicted RBP20.18■□□□□ 0.82
SDCCAG3-209ENST00000468963 SLC4A9Q96Q91 983 aa20.18■□□□□ 0.82
SDCCAG3-209ENST00000468963 SSFA2P28290 1259 aa20.17■□□□□ 0.82
SDCCAG3-209ENST00000468963 CHD4Q14839 1912 aa20.17■□□□□ 0.82
SDCCAG3-209ENST00000468963 PHF14O94880 888 aa20.16■□□□□ 0.82
SDCCAG3-209ENST00000468963 MTHFSP49914 203 aa20.16■□□□□ 0.82
SDCCAG3-209ENST00000468963 CD2APQ9Y5K6 639 aa20.16■□□□□ 0.82
SDCCAG3-209ENST00000468963 KDRP35968 1356 aa20.16■□□□□ 0.82
SDCCAG3-209ENST00000468963 UBR3Q6ZT12 1888 aa20.16■□□□□ 0.82
SDCCAG3-209ENST00000468963 KDM6AO15550 1401 aaPredicted RBP20.15■□□□□ 0.82
SDCCAG3-209ENST00000468963 CABP4P57796 275 aa20.14■□□□□ 0.81
SDCCAG3-209ENST00000468963 GNPATO15228 680 aa20.13■□□□□ 0.81
SDCCAG3-209ENST00000468963 YBX3P16989 372 aaKnown RBP eCLIP20.13■□□□□ 0.81
SDCCAG3-209ENST00000468963 PELP1Q8IZL8 1130 aaKnown RBP20.13■□□□□ 0.81
SDCCAG3-209ENST00000468963 C1orf141Q5JVX7 400 aa20.12■□□□□ 0.81
SDCCAG3-209ENST00000468963 RC3H1Q5TC82 1133 aaKnown RBP20.12■□□□□ 0.81
SDCCAG3-209ENST00000468963 NFATC2IPQ8NCF5 419 aa20.12■□□□□ 0.81
SDCCAG3-209ENST00000468963 RBM42Q9BTD8 480 aaKnown RBP20.12■□□□□ 0.81
SDCCAG3-209ENST00000468963 GRIN3BO60391 1043 aa20.1■□□□□ 0.81
SDCCAG3-209ENST00000468963 CC2D1BQ5T0F9 858 aaKnown RBP20.1■□□□□ 0.81
SDCCAG3-209ENST00000468963 TRAPPC3LQ5T215 181 aa20.09■□□□□ 0.81
SDCCAG3-209ENST00000468963 RTCBQ9Y3I0 505 aaKnown RBP20.09■□□□□ 0.81
SDCCAG3-209ENST00000468963 RPS6KA4O75676 772 aa20.08■□□□□ 0.81
SDCCAG3-209ENST00000468963 AKAP4Q5JQC9 854 aa20.08■□□□□ 0.81
SDCCAG3-209ENST00000468963 ZNF831Q5JPB2 1677 aa20.07■□□□□ 0.8
SDCCAG3-209ENST00000468963 ARHGEF1Q92888 912 aaKnown RBP20.07■□□□□ 0.8
SDCCAG3-209ENST00000468963 LGR6Q9HBX8 967 aa20.07■□□□□ 0.8
SDCCAG3-209ENST00000468963 NPC1L1Q9UHC9 1359 aa20.07■□□□□ 0.8
SDCCAG3-209ENST00000468963 CNTNAP4Q9C0A0 1308 aa20.06■□□□□ 0.8
SDCCAG3-209ENST00000468963 DIAPH1O60610 1272 aaKnown RBP20.06■□□□□ 0.8
SDCCAG3-209ENST00000468963 PTCD1O75127 700 aaKnown RBP20.06■□□□□ 0.8
SDCCAG3-209ENST00000468963 HMOX1P09601 288 aa20.06■□□□□ 0.8
SDCCAG3-209ENST00000468963 ADRA2BP18089 450 aa20.05■□□□□ 0.8
SDCCAG3-209ENST00000468963 MMP10P09238 476 aa20.04■□□□□ 0.8
SDCCAG3-209ENST00000468963 NLGN1Q8N2Q7 840 aa20.04■□□□□ 0.8
SDCCAG3-209ENST00000468963 MYH14Q7Z406 1995 aaKnown RBP20.04■□□□□ 0.8
SDCCAG3-209ENST00000468963 RNMTO43148 476 aaKnown RBP20.03■□□□□ 0.8
SDCCAG3-209ENST00000468963 MTHFSDQ2M296 383 aaKnown RBP20.03■□□□□ 0.8
SDCCAG3-209ENST00000468963 SLC52A2Q9HAB3 445 aa20.03■□□□□ 0.8
SDCCAG3-209ENST00000468963 SCN11AQ9UI33 1791 aa20.01■□□□□ 0.79
SDCCAG3-209ENST00000468963 GYS1P13807 737 aa20.01■□□□□ 0.79
SDCCAG3-209ENST00000468963 RFC4P35249 363 aa20.01■□□□□ 0.79
SDCCAG3-209ENST00000468963 CRKLP46109 303 aaKnown RBP20.01■□□□□ 0.79
SDCCAG3-209ENST00000468963 COL5A3P25940 1745 aaPredicted RBP20.01■□□□□ 0.79
SDCCAG3-209ENST00000468963 INTS5Q6P9B9 1019 aaKnown RBP20■□□□□ 0.79
SDCCAG3-209ENST00000468963 CNGB1Q14028 1251 aaPredicted RBP19.99■□□□□ 0.79
SDCCAG3-209ENST00000468963 SLC39A6Q13433 755 aa19.98■□□□□ 0.79
SDCCAG3-209ENST00000468963 DNAJC10Q8IXB1 793 aa19.97■□□□□ 0.79
SDCCAG3-209ENST00000468963 COL3A1P02461 1466 aaPredicted RBP19.97■□□□□ 0.79
SDCCAG3-209ENST00000468963 C1QTNF8P60827 252 aa19.96■□□□□ 0.79
SDCCAG3-209ENST00000468963 TGFB2P61812 414 aa19.96■□□□□ 0.79
SDCCAG3-209ENST00000468963 SRP68Q9UHB9 627 aaKnown RBP19.95■□□□□ 0.78
SDCCAG3-209ENST00000468963 WWC3Q9ULE0 1092 aa19.95■□□□□ 0.78
SDCCAG3-209ENST00000468963 U2SURPO15042 1029 aaKnown RBP19.94■□□□□ 0.78
SDCCAG3-209ENST00000468963 CYP19A1P11511 503 aaPredicted RBP19.94■□□□□ 0.78
SDCCAG3-209ENST00000468963 USP42Q9H9J4 1324 aaKnown RBP19.94■□□□□ 0.78
SDCCAG3-209ENST00000468963 MRC1P22897 1456 aa19.93■□□□□ 0.78
SDCCAG3-209ENST00000468963 A0A0G2JLW4 131 aa19.93■□□□□ 0.78
SDCCAG3-209ENST00000468963 FKBP8Q14318 412 aa19.93■□□□□ 0.78
SDCCAG3-209ENST00000468963 IL17REQ8NFR9 667 aa19.93■□□□□ 0.78
SDCCAG3-209ENST00000468963 CCDC87Q9NVE4 849 aa19.93■□□□□ 0.78
SDCCAG3-209ENST00000468963 PARP3Q9Y6F1 533 aa19.93■□□□□ 0.78
SDCCAG3-209ENST00000468963 TJP1Q07157 1748 aa19.93■□□□□ 0.78
SDCCAG3-209ENST00000468963 CICQ96RK0 1608 aaPredicted RBP19.92■□□□□ 0.78
SDCCAG3-209ENST00000468963 ADAMTS7Q9UKP4 1686 aa19.92■□□□□ 0.78
SDCCAG3-209ENST00000468963 VSIG10Q8N0Z9 540 aa19.92■□□□□ 0.78
SDCCAG3-209ENST00000468963 KIF13BQ9NQT8 1826 aa19.92■□□□□ 0.78
SDCCAG3-209ENST00000468963 PXDNLA1KZ92 1463 aa19.92■□□□□ 0.78
SDCCAG3-209ENST00000468963 TM4SF1P30408 202 aa19.91■□□□□ 0.78
SDCCAG3-209ENST00000468963 GAS2L2Q8NHY3 880 aa19.91■□□□□ 0.78
SDCCAG3-209ENST00000468963 SOS1Q07889 1333 aaPredicted RBP19.91■□□□□ 0.78
SDCCAG3-209ENST00000468963 C10orf71Q711Q0 1435 aa19.91■□□□□ 0.78
SDCCAG3-209ENST00000468963 GNAT3A8MTJ3 354 aa19.9■□□□□ 0.78
SDCCAG3-209ENST00000468963 GIGYF1O75420 1035 aaPredicted RBP19.9■□□□□ 0.78
SDCCAG3-209ENST00000468963 DPEP1P16444 411 aa19.9■□□□□ 0.78
SDCCAG3-209ENST00000468963 KCNA3P22001 575 aa19.9■□□□□ 0.78
SDCCAG3-209ENST00000468963 DDR1Q08345 913 aa19.9■□□□□ 0.78
SDCCAG3-209ENST00000468963 KCPQ6ZWJ8 1503 aa19.9■□□□□ 0.78
SDCCAG3-209ENST00000468963 VIRMAQ69YN4 1812 aaKnown RBP19.9■□□□□ 0.78
SDCCAG3-209ENST00000468963 C4AP0C0L4 1744 aa19.89■□□□□ 0.77
SDCCAG3-209ENST00000468963 PHACTR3Q96KR7 559 aa19.89■□□□□ 0.77
SDCCAG3-209ENST00000468963 KIAA1551Q9HCM1 1747 aa19.88■□□□□ 0.77
SDCCAG3-209ENST00000468963 ATP10DQ9P241 1426 aa19.88■□□□□ 0.77
SDCCAG3-209ENST00000468963 ADCY9O60503 1353 aa19.88■□□□□ 0.77
SDCCAG3-209ENST00000468963 PPP2R1AP30153 589 aa19.88■□□□□ 0.77
SDCCAG3-209ENST00000468963 USPL1Q5W0Q7 1092 aa19.88■□□□□ 0.77
SDCCAG3-209ENST00000468963 CFAP53Q96M91 514 aa19.88■□□□□ 0.77
SDCCAG3-209ENST00000468963 RSPH6AQ9H0K4 717 aa19.88■□□□□ 0.77
SDCCAG3-209ENST00000468963 ZPR1O75312 459 aa19.87■□□□□ 0.77
SDCCAG3-209ENST00000468963 NARFQ9UHQ1 456 aa19.87■□□□□ 0.77
SDCCAG3-209ENST00000468963 ZBTB1Q9Y2K1 713 aa19.87■□□□□ 0.77
SDCCAG3-209ENST00000468963 N4BP2Q86UW6 1770 aaPredicted RBP19.86■□□□□ 0.77
SDCCAG3-209ENST00000468963 POLRMTO00411 1230 aaKnown RBP19.86■□□□□ 0.77
SDCCAG3-209ENST00000468963 BCS1LQ9Y276 419 aa19.86■□□□□ 0.77
SDCCAG3-209ENST00000468963 PRKAR2BP31323 418 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms