RNA–Protein interactions for RNA: ENST00000465120.3

HOXB3-204, Transcript of homeobox B3, humanhuman

TSL 3 BASIC

Gene HOXB3, Length 943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-204ENST00000465120 UTRNP46939 3433 aa21.01■□□□□ 0.95
HOXB3-204ENST00000465120 PLEKHG2Q9H7P9 1386 aa21.01■□□□□ 0.95
HOXB3-204ENST00000465120 ERVV-2B6SEH9 535 aa21.01■□□□□ 0.95
HOXB3-204ENST00000465120 CABP4P57796 275 aa21.01■□□□□ 0.95
HOXB3-204ENST00000465120 GNPATO15228 680 aa21■□□□□ 0.95
HOXB3-204ENST00000465120 MTHFSP49914 203 aa21■□□□□ 0.95
HOXB3-204ENST00000465120 ITPK1Q13572 414 aa21■□□□□ 0.95
HOXB3-204ENST00000465120 CNGB1Q14028 1251 aaPredicted RBP21■□□□□ 0.95
HOXB3-204ENST00000465120 AMER1Q5JTC6 1135 aaPredicted RBP21■□□□□ 0.95
HOXB3-204ENST00000465120 SSFA2P28290 1259 aa20.99■□□□□ 0.95
HOXB3-204ENST00000465120 AMIGO3Q86WK7 504 aa20.99■□□□□ 0.95
HOXB3-204ENST00000465120 CC2D1BQ5T0F9 858 aaKnown RBP20.98■□□□□ 0.95
HOXB3-204ENST00000465120 ZNF784Q8NCA9 323 aaPredicted RBP20.98■□□□□ 0.95
HOXB3-204ENST00000465120 CHD4Q14839 1912 aa20.98■□□□□ 0.95
HOXB3-204ENST00000465120 IL13P35225 146 aa20.97■□□□□ 0.95
HOXB3-204ENST00000465120 UBR3Q6ZT12 1888 aa20.96■□□□□ 0.95
HOXB3-204ENST00000465120 CD2APQ9Y5K6 639 aa20.95■□□□□ 0.94
HOXB3-204ENST00000465120 GRIN3BO60391 1043 aa20.94■□□□□ 0.94
HOXB3-204ENST00000465120 NFATC2IPQ8NCF5 419 aa20.94■□□□□ 0.94
HOXB3-204ENST00000465120 RTCBQ9Y3I0 505 aaKnown RBP20.94■□□□□ 0.94
HOXB3-204ENST00000465120 PTCD1O75127 700 aaKnown RBP20.93■□□□□ 0.94
HOXB3-204ENST00000465120 HMOX1P09601 288 aa20.93■□□□□ 0.94
HOXB3-204ENST00000465120 TRAPPC3LQ5T215 181 aa20.93■□□□□ 0.94
HOXB3-204ENST00000465120 KDM6AO15550 1401 aaPredicted RBP20.93■□□□□ 0.94
HOXB3-204ENST00000465120 PER1O15534 1290 aaPredicted RBP20.92■□□□□ 0.94
HOXB3-204ENST00000465120 YBX3P16989 372 aaKnown RBP eCLIP20.92■□□□□ 0.94
HOXB3-204ENST00000465120 SLC4A9Q96Q91 983 aa20.91■□□□□ 0.94
HOXB3-204ENST00000465120 KDRP35968 1356 aa20.9■□□□□ 0.94
HOXB3-204ENST00000465120 DIAPH1O60610 1272 aaKnown RBP20.9■□□□□ 0.94
HOXB3-204ENST00000465120 GOLGB1Q14789 3259 aaKnown RBP20.9■□□□□ 0.94
HOXB3-204ENST00000465120 AKAP4Q5JQC9 854 aa20.89■□□□□ 0.93
HOXB3-204ENST00000465120 RFC4P35249 363 aa20.88■□□□□ 0.93
HOXB3-204ENST00000465120 RC3H1Q5TC82 1133 aaKnown RBP20.88■□□□□ 0.93
HOXB3-204ENST00000465120 WWC3Q9ULE0 1092 aa20.88■□□□□ 0.93
HOXB3-204ENST00000465120 MMP10P09238 476 aa20.87■□□□□ 0.93
HOXB3-204ENST00000465120 ARHGEF1Q92888 912 aaKnown RBP20.87■□□□□ 0.93
HOXB3-204ENST00000465120 RPS6KA4O75676 772 aa20.86■□□□□ 0.93
HOXB3-204ENST00000465120 NLGN1Q8N2Q7 840 aa20.86■□□□□ 0.93
HOXB3-204ENST00000465120 CNTNAP4Q9C0A0 1308 aa20.85■□□□□ 0.93
HOXB3-204ENST00000465120 U2SURPO15042 1029 aaKnown RBP20.85■□□□□ 0.93
HOXB3-204ENST00000465120 ADRA2BP18089 450 aa20.85■□□□□ 0.93
HOXB3-204ENST00000465120 LGR6Q9HBX8 967 aa20.85■□□□□ 0.93
HOXB3-204ENST00000465120 SLC52A2Q9HAB3 445 aa20.84■□□□□ 0.93
HOXB3-204ENST00000465120 RNMTO43148 476 aaKnown RBP20.83■□□□□ 0.93
HOXB3-204ENST00000465120 CRKLP46109 303 aaKnown RBP20.83■□□□□ 0.93
HOXB3-204ENST00000465120 MTHFSDQ2M296 383 aaKnown RBP20.83■□□□□ 0.93
HOXB3-204ENST00000465120 ZNF831Q5JPB2 1677 aa20.83■□□□□ 0.92
HOXB3-204ENST00000465120 SCN11AQ9UI33 1791 aa20.82■□□□□ 0.92
HOXB3-204ENST00000465120 COL5A3P25940 1745 aaPredicted RBP20.81■□□□□ 0.92
HOXB3-204ENST00000465120 GYS1P13807 737 aa20.8■□□□□ 0.92
HOXB3-204ENST00000465120 SLC39A6Q13433 755 aa20.8■□□□□ 0.92
HOXB3-204ENST00000465120 PARP3Q9Y6F1 533 aa20.8■□□□□ 0.92
HOXB3-204ENST00000465120 NPC1L1Q9UHC9 1359 aa20.8■□□□□ 0.92
HOXB3-204ENST00000465120 CCDC87Q9NVE4 849 aa20.79■□□□□ 0.92
HOXB3-204ENST00000465120 GIGYF1O75420 1035 aaPredicted RBP20.78■□□□□ 0.92
HOXB3-204ENST00000465120 DNAJC10Q8IXB1 793 aa20.78■□□□□ 0.92
HOXB3-204ENST00000465120 MYH14Q7Z406 1995 aaKnown RBP20.77■□□□□ 0.92
HOXB3-204ENST00000465120 CFAP53Q96M91 514 aa20.77■□□□□ 0.92
HOXB3-204ENST00000465120 SRP68Q9UHB9 627 aaKnown RBP20.77■□□□□ 0.92
HOXB3-204ENST00000465120 CICQ96RK0 1608 aaPredicted RBP20.76■□□□□ 0.91
HOXB3-204ENST00000465120 C1QTNF8P60827 252 aa20.76■□□□□ 0.91
HOXB3-204ENST00000465120 A0A0G2JLW4 131 aa20.75■□□□□ 0.91
HOXB3-204ENST00000465120 TGFB2P61812 414 aa20.75■□□□□ 0.91
HOXB3-204ENST00000465120 INTS5Q6P9B9 1019 aaKnown RBP20.75■□□□□ 0.91
HOXB3-204ENST00000465120 ZPR1O75312 459 aa20.74■□□□□ 0.91
HOXB3-204ENST00000465120 TJP1Q07157 1748 aa20.74■□□□□ 0.91
HOXB3-204ENST00000465120 TEFQ10587 303 aa20.74■□□□□ 0.91
HOXB3-204ENST00000465120 TTC5Q8N0Z6 440 aa20.74■□□□□ 0.91
HOXB3-204ENST00000465120 GAS2L2Q8NHY3 880 aa20.74■□□□□ 0.91
HOXB3-204ENST00000465120 BCS1LQ9Y276 419 aa20.74■□□□□ 0.91
HOXB3-204ENST00000465120 VIRMAQ69YN4 1812 aaKnown RBP20.74■□□□□ 0.91
HOXB3-204ENST00000465120 SENP3-EIF4A1A0A087X0R7 540 aa20.73■□□□□ 0.91
HOXB3-204ENST00000465120 GNAT3A8MTJ3 354 aa20.73■□□□□ 0.91
HOXB3-204ENST00000465120 FKBP8Q14318 412 aa20.73■□□□□ 0.91
HOXB3-204ENST00000465120 USP42Q9H9J4 1324 aaKnown RBP20.73■□□□□ 0.91
HOXB3-204ENST00000465120 CYP19A1P11511 503 aaPredicted RBP20.72■□□□□ 0.91
HOXB3-204ENST00000465120 ZNF526Q8TF50 670 aaPredicted RBP20.72■□□□□ 0.91
HOXB3-204ENST00000465120 NUDCQ9Y266 331 aa20.72■□□□□ 0.91
HOXB3-204ENST00000465120 COL3A1P02461 1466 aaPredicted RBP20.72■□□□□ 0.91
HOXB3-204ENST00000465120 C4AP0C0L4 1744 aa20.72■□□□□ 0.91
HOXB3-204ENST00000465120 ATP10DQ9P241 1426 aa20.71■□□□□ 0.91
HOXB3-204ENST00000465120 PXDNLA1KZ92 1463 aa20.71■□□□□ 0.91
HOXB3-204ENST00000465120 MRC1P22897 1456 aa20.71■□□□□ 0.91
HOXB3-204ENST00000465120 DPEP1P16444 411 aa20.71■□□□□ 0.91
HOXB3-204ENST00000465120 N4BP2Q86UW6 1770 aaPredicted RBP20.71■□□□□ 0.91
HOXB3-204ENST00000465120 USPL1Q5W0Q7 1092 aa20.7■□□□□ 0.9
HOXB3-204ENST00000465120 GPBP1L1Q9HC44 474 aaPredicted RBP20.7■□□□□ 0.9
HOXB3-204ENST00000465120 C10orf71Q711Q0 1435 aa20.7■□□□□ 0.9
HOXB3-204ENST00000465120 FCHSD2O94868 740 aa20.69■□□□□ 0.9
HOXB3-204ENST00000465120 CANXP27824 592 aaKnown RBP20.69■□□□□ 0.9
HOXB3-204ENST00000465120 PRKAR2BP31323 418 aa20.69■□□□□ 0.9
HOXB3-204ENST00000465120 VSIG10Q8N0Z9 540 aa20.69■□□□□ 0.9
HOXB3-204ENST00000465120 STARD3NLO95772 234 aa20.68■□□□□ 0.9
HOXB3-204ENST00000465120 U2AF1L5P0DN76 240 aaPredicted RBP20.68■□□□□ 0.9
HOXB3-204ENST00000465120 U2AF1Q01081 240 aaKnown RBP eCLIP20.68■□□□□ 0.94e-6■■■■□ 20.8
HOXB3-204ENST00000465120 ARHGAP27Q6ZUM4 889 aa20.68■□□□□ 0.9
HOXB3-204ENST00000465120 IL17REQ8NFR9 667 aa20.68■□□□□ 0.9
HOXB3-204ENST00000465120 ZBTB1Q9Y2K1 713 aa20.68■□□□□ 0.9
HOXB3-204ENST00000465120 KIF13BQ9NQT8 1826 aa20.68■□□□□ 0.9
HOXB3-204ENST00000465120 SOS1Q07889 1333 aaPredicted RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms