RNA–Protein interactions for RNA: ENST00000465085.2

ABCD4-203, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 1,123 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-203ENST00000465085 KIAA1551Q9HCM1 1747 aa17.35■□□□□ 0.37
ABCD4-203ENST00000465085 EIF4A2Q14240 407 aaKnown RBP17.34■□□□□ 0.37
ABCD4-203ENST00000465085 CLSPNQ9HAW4 1339 aa17.33■□□□□ 0.36
ABCD4-203ENST00000465085 GNPATO15228 680 aa17.33■□□□□ 0.36
ABCD4-203ENST00000465085 ATP6V1AP38606 617 aa17.33■□□□□ 0.36
ABCD4-203ENST00000465085 ATG3Q9NT62 314 aa17.33■□□□□ 0.36
ABCD4-203ENST00000465085 GPBP1L1Q9HC44 474 aaPredicted RBP17.31■□□□□ 0.36
ABCD4-203ENST00000465085 MYH14Q7Z406 1995 aaKnown RBP17.31■□□□□ 0.36
ABCD4-203ENST00000465085 N4BP2Q86UW6 1770 aaPredicted RBP17.3■□□□□ 0.36
ABCD4-203ENST00000465085 C4AP0C0L4 1744 aa17.3■□□□□ 0.36
ABCD4-203ENST00000465085 ERVV-2B6SEH9 535 aa17.3■□□□□ 0.36
ABCD4-203ENST00000465085 TNNT2P45379 298 aaPredicted RBP17.3■□□□□ 0.36
ABCD4-203ENST00000465085 BRCA1P38398 1863 aaKnown RBP17.3■□□□□ 0.36
ABCD4-203ENST00000465085 PXDNLA1KZ92 1463 aa17.29■□□□□ 0.36
ABCD4-203ENST00000465085 HSP90AB1P08238 724 aaKnown RBP17.28■□□□□ 0.36
ABCD4-203ENST00000465085 MMP10P09238 476 aa17.28■□□□□ 0.36
ABCD4-203ENST00000465085 DCAF5Q96JK2 942 aa17.28■□□□□ 0.36
ABCD4-203ENST00000465085 POLR3GLQ9BT43 218 aa17.28■□□□□ 0.36
ABCD4-203ENST00000465085 WWC3Q9ULE0 1092 aa17.28■□□□□ 0.36
ABCD4-203ENST00000465085 KDM6AO15550 1401 aaPredicted RBP17.28■□□□□ 0.36
ABCD4-203ENST00000465085 SLC4A9Q96Q91 983 aa17.27■□□□□ 0.36
ABCD4-203ENST00000465085 RTCBQ9Y3I0 505 aaKnown RBP17.27■□□□□ 0.36
ABCD4-203ENST00000465085 C10orf71Q711Q0 1435 aa17.27■□□□□ 0.35
ABCD4-203ENST00000465085 CNTNAP4Q9C0A0 1308 aa17.26■□□□□ 0.35
ABCD4-203ENST00000465085 ADRA2BP18089 450 aa17.26■□□□□ 0.35
ABCD4-203ENST00000465085 PLEKHO1Q53GL0 409 aaPredicted RBP17.26■□□□□ 0.35
ABCD4-203ENST00000465085 TRAPPC3LQ5T215 181 aa17.26■□□□□ 0.35
ABCD4-203ENST00000465085 RC3H1Q5TC82 1133 aaKnown RBP17.26■□□□□ 0.35
ABCD4-203ENST00000465085 SCN11AQ9UI33 1791 aa17.25■□□□□ 0.35
ABCD4-203ENST00000465085 AMOTQ4VCS5 1084 aa17.25■□□□□ 0.35
ABCD4-203ENST00000465085 NLGN1Q8N2Q7 840 aa17.25■□□□□ 0.35
ABCD4-203ENST00000465085 ZNF526Q8TF50 670 aaPredicted RBP17.25■□□□□ 0.35
ABCD4-203ENST00000465085 TJP1Q07157 1748 aa17.24■□□□□ 0.35
ABCD4-203ENST00000465085 ARFGEF1Q9Y6D6 1849 aa17.24■□□□□ 0.35
ABCD4-203ENST00000465085 TGFB2P61812 414 aa17.24■□□□□ 0.35
ABCD4-203ENST00000465085 EIF4G2P78344 907 aaKnown RBP eCLIP17.24■□□□□ 0.35
ABCD4-203ENST00000465085 ZNF530Q6P9A1 599 aaPredicted RBP17.24■□□□□ 0.35
ABCD4-203ENST00000465085 RBM42Q9BTD8 480 aaKnown RBP17.24■□□□□ 0.35
ABCD4-203ENST00000465085 PANK3Q9H999 370 aa17.24■□□□□ 0.35
ABCD4-203ENST00000465085 ARHGEF1Q92888 912 aaKnown RBP17.23■□□□□ 0.35
ABCD4-203ENST00000465085 VIRMAQ69YN4 1812 aaKnown RBP17.23■□□□□ 0.35
ABCD4-203ENST00000465085 RPS6KA4O75676 772 aa17.22■□□□□ 0.35
ABCD4-203ENST00000465085 GYS1P13807 737 aa17.22■□□□□ 0.35
ABCD4-203ENST00000465085 HSPA6P17066 643 aa17.22■□□□□ 0.35
ABCD4-203ENST00000465085 HSPA5P11021 654 aaKnown RBP17.21■□□□□ 0.35
ABCD4-203ENST00000465085 CABP4P57796 275 aa17.21■□□□□ 0.35
ABCD4-203ENST00000465085 AEBP1Q8IUX7 1158 aa17.21■□□□□ 0.35
ABCD4-203ENST00000465085 KIF3CO14782 793 aa17.2■□□□□ 0.34
ABCD4-203ENST00000465085 RFC4P35249 363 aa17.2■□□□□ 0.34
ABCD4-203ENST00000465085 C1orf141Q5JVX7 400 aa17.2■□□□□ 0.34
ABCD4-203ENST00000465085 CCDC87Q9NVE4 849 aa17.2■□□□□ 0.34
ABCD4-203ENST00000465085 ADAMTS7Q9UKP4 1686 aa17.2■□□□□ 0.34
ABCD4-203ENST00000465085 A0A0G2JLW4 131 aa17.19■□□□□ 0.34
ABCD4-203ENST00000465085 MTHFSP49914 203 aa17.19■□□□□ 0.34
ABCD4-203ENST00000465085 MORC1Q86VD1 984 aa17.19■□□□□ 0.34
ABCD4-203ENST00000465085 BCS1LQ9Y276 419 aa17.19■□□□□ 0.34
ABCD4-203ENST00000465085 PCGF6Q9BYE7 350 aa17.18■□□□□ 0.34
ABCD4-203ENST00000465085 PARP3Q9Y6F1 533 aa17.18■□□□□ 0.34
ABCD4-203ENST00000465085 PTCD1O75127 700 aaKnown RBP17.17■□□□□ 0.34
ABCD4-203ENST00000465085 DPEP1P16444 411 aa17.17■□□□□ 0.34
ABCD4-203ENST00000465085 SULT6B1Q6IMI4 303 aa17.17■□□□□ 0.34
ABCD4-203ENST00000465085 NFATC2IPQ8NCF5 419 aa17.17■□□□□ 0.34
ABCD4-203ENST00000465085 CRKLP46109 303 aaKnown RBP17.16■□□□□ 0.34
ABCD4-203ENST00000465085 MRC1P22897 1456 aa17.16■□□□□ 0.34
ABCD4-203ENST00000465085 USP42Q9H9J4 1324 aaKnown RBP17.16■□□□□ 0.34
ABCD4-203ENST00000465085 IL13P35225 146 aa17.15■□□□□ 0.34
ABCD4-203ENST00000465085 IFFO2Q5TF58 517 aa17.15■□□□□ 0.34
ABCD4-203ENST00000465085 FCHSD2O94868 740 aa17.14■□□□□ 0.33
ABCD4-203ENST00000465085 ARHGAP27Q6ZUM4 889 aa17.14■□□□□ 0.33
ABCD4-203ENST00000465085 KNSTRNQ9Y448 316 aa17.14■□□□□ 0.33
ABCD4-203ENST00000465085 SBF1O95248 1867 aa17.14■□□□□ 0.33
ABCD4-203ENST00000465085 AFDNP55196 1824 aaKnown RBP17.13■□□□□ 0.33
ABCD4-203ENST00000465085 KCNA3P22001 575 aa17.13■□□□□ 0.33
ABCD4-203ENST00000465085 SRP68Q9UHB9 627 aaKnown RBP17.13■□□□□ 0.33
ABCD4-203ENST00000465085 DDR1Q08345 913 aa17.12■□□□□ 0.33
ABCD4-203ENST00000465085 FKBP8Q14318 412 aa17.12■□□□□ 0.33
ABCD4-203ENST00000465085 AKAP4Q5JQC9 854 aa17.12■□□□□ 0.33
ABCD4-203ENST00000465085 UBR2Q8IWV8 1755 aa17.12■□□□□ 0.33
ABCD4-203ENST00000465085 NRXN2Q9P2S2 1712 aa17.11■□□□□ 0.33
ABCD4-203ENST00000465085 DLEC1Q9Y238 1755 aa17.11■□□□□ 0.33
ABCD4-203ENST00000465085 TOMM70O94826 608 aa17.11■□□□□ 0.33
ABCD4-203ENST00000465085 AMER1Q5JTC6 1135 aaPredicted RBP17.11■□□□□ 0.33
ABCD4-203ENST00000465085 INTS5Q6P9B9 1019 aaKnown RBP17.11■□□□□ 0.33
ABCD4-203ENST00000465085 SLC52A2Q9HAB3 445 aa17.11■□□□□ 0.33
ABCD4-203ENST00000465085 PIM2Q9P1W9 311 aa17.11■□□□□ 0.33
ABCD4-203ENST00000465085 KCPQ6ZWJ8 1503 aa17.11■□□□□ 0.33
ABCD4-203ENST00000465085 APLP1P51693 650 aa17.09■□□□□ 0.33
ABCD4-203ENST00000465085 DALRD3Q5D0E6 543 aaKnown RBP17.09■□□□□ 0.33
ABCD4-203ENST00000465085 DNAJC10Q8IXB1 793 aa17.09■□□□□ 0.33
ABCD4-203ENST00000465085 SOS1Q07889 1333 aaPredicted RBP17.09■□□□□ 0.33
ABCD4-203ENST00000465085 TNRC6CQ9HCJ0 1690 aaKnown RBP17.09■□□□□ 0.33
ABCD4-203ENST00000465085 WDR90Q96KV7 1748 aa17.09■□□□□ 0.33
ABCD4-203ENST00000465085 POLRMTO00411 1230 aaKnown RBP17.08■□□□□ 0.32
ABCD4-203ENST00000465085 TM4SF1P30408 202 aa17.08■□□□□ 0.32
ABCD4-203ENST00000465085 C9orf131Q5VYM1 1079 aa17.08■□□□□ 0.32
ABCD4-203ENST00000465085 NMRK2Q9NPI5 230 aa17.08■□□□□ 0.32
ABCD4-203ENST00000465085 LGR6Q9HBX8 967 aa17.07■□□□□ 0.32
ABCD4-203ENST00000465085 COL15A1P39059 1388 aa17.06■□□□□ 0.32
ABCD4-203ENST00000465085 RNMTO43148 476 aaKnown RBP17.06■□□□□ 0.32
ABCD4-203ENST00000465085 ZPR1O75312 459 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms