RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 C1orf115Q9H7X2 142 aa27.34■■□□□ 1.97
PDLIM2-216ENST00000464275 RTL5Q5HYW3 569 aaPredicted RBP27.33■■□□□ 1.97
PDLIM2-216ENST00000464275 GCC1Q96CN9 775 aa27.33■■□□□ 1.97
PDLIM2-216ENST00000464275 G2E3Q7L622 706 aa27.33■■□□□ 1.97
PDLIM2-216ENST00000464275 SOS2Q07890 1332 aaPredicted RBP27.32■■□□□ 1.96
PDLIM2-216ENST00000464275 ABCA3Q99758 1704 aa27.32■■□□□ 1.96
PDLIM2-216ENST00000464275 PLEKHG2Q9H7P9 1386 aa27.32■■□□□ 1.96
PDLIM2-216ENST00000464275 MPRIPQ6WCQ1 1025 aa27.31■■□□□ 1.96
PDLIM2-216ENST00000464275 NLRP2Q9NX02 1062 aa27.31■■□□□ 1.96
PDLIM2-216ENST00000464275 NHSL1Q5SYE7 1610 aa27.31■■□□□ 1.96
PDLIM2-216ENST00000464275 NUCB1Q02818 461 aa27.31■■□□□ 1.96
PDLIM2-216ENST00000464275 HOXB7P09629 217 aa27.3■■□□□ 1.96
PDLIM2-216ENST00000464275 EIF4A1P60842 406 aaKnown RBP27.3■■□□□ 1.96
PDLIM2-216ENST00000464275 RAPGEF4Q8WZA2 1011 aa27.3■■□□□ 1.96
PDLIM2-216ENST00000464275 CHMP4AQ9BY43 222 aa27.3■■□□□ 1.96
PDLIM2-216ENST00000464275 USP35Q9P2H5 1018 aa27.3■■□□□ 1.96
PDLIM2-216ENST00000464275 CCT4P50991 539 aaKnown RBP27.29■■□□□ 1.96
PDLIM2-216ENST00000464275 PKD1L3Q7Z443 1732 aa27.29■■□□□ 1.96
PDLIM2-216ENST00000464275 BTBD11A6QL63 1104 aa27.28■■□□□ 1.96
PDLIM2-216ENST00000464275 SIRT2Q8IXJ6 389 aa27.28■■□□□ 1.96
PDLIM2-216ENST00000464275 TATP17735 454 aaPredicted RBP27.28■■□□□ 1.96
PDLIM2-216ENST00000464275 FLIIQ13045 1269 aa27.28■■□□□ 1.96
PDLIM2-216ENST00000464275 CSB-PGBD3P0DP91 1061 aa27.27■■□□□ 1.96
PDLIM2-216ENST00000464275 CHRNA2Q15822 529 aa27.27■■□□□ 1.96
PDLIM2-216ENST00000464275 HDGFL1Q5TGJ6 251 aa27.26■■□□□ 1.95
PDLIM2-216ENST00000464275 NBR1Q14596 966 aa27.26■■□□□ 1.95
PDLIM2-216ENST00000464275 CHD1LQ86WJ1 897 aa27.26■■□□□ 1.95
PDLIM2-216ENST00000464275 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.26■■□□□ 1.95
PDLIM2-216ENST00000464275 NECTIN2Q92692 538 aa27.25■■□□□ 1.95
PDLIM2-216ENST00000464275 PXDNLA1KZ92 1463 aa27.24■■□□□ 1.95
PDLIM2-216ENST00000464275 RPAP2Q8IXW5 612 aaPredicted RBP27.24■■□□□ 1.95
PDLIM2-216ENST00000464275 SPG7Q9UQ90 795 aa27.24■■□□□ 1.95
PDLIM2-216ENST00000464275 ATP10DQ9P241 1426 aa27.24■■□□□ 1.95
PDLIM2-216ENST00000464275 DEKP35659 375 aaKnown RBP27.24■■□□□ 1.95
PDLIM2-216ENST00000464275 ANKRD44Q8N8A2 993 aa27.24■■□□□ 1.95
PDLIM2-216ENST00000464275 MEGF6O75095 1541 aa27.24■■□□□ 1.95
PDLIM2-216ENST00000464275 F6X3S4 739 aa27.23■■□□□ 1.95
PDLIM2-216ENST00000464275 FKBP5Q13451 457 aaPredicted RBP27.23■■□□□ 1.95
PDLIM2-216ENST00000464275 SLC4A10Q6U841 1118 aa27.23■■□□□ 1.95
PDLIM2-216ENST00000464275 PARP4Q9UKK3 1724 aaKnown RBP27.23■■□□□ 1.95
PDLIM2-216ENST00000464275 KCNQ3O43525 872 aa27.21■■□□□ 1.95
PDLIM2-216ENST00000464275 MEIS3Q99687 375 aa27.21■■□□□ 1.95
PDLIM2-216ENST00000464275 ANKRD45Q5TZF3 282 aa27.2■■□□□ 1.95
PDLIM2-216ENST00000464275 LNPKQ9C0E8 428 aa27.2■■□□□ 1.95
PDLIM2-216ENST00000464275 CEP85Q6P2H3 762 aa27.19■■□□□ 1.94
PDLIM2-216ENST00000464275 DCTPP1Q9H773 170 aa27.18■■□□□ 1.94
PDLIM2-216ENST00000464275 PHKG2P15735 406 aa27.18■■□□□ 1.94
PDLIM2-216ENST00000464275 HEG1Q9ULI3 1381 aa27.18■■□□□ 1.94
PDLIM2-216ENST00000464275 EIF2S2P20042 333 aaKnown RBP27.17■■□□□ 1.94
PDLIM2-216ENST00000464275 PRDM11Q9NQV5 511 aa27.17■■□□□ 1.94
PDLIM2-216ENST00000464275 IFNL2Q8IZJ0 200 aa27.17■■□□□ 1.94
PDLIM2-216ENST00000464275 KDM6AO15550 1401 aaPredicted RBP27.17■■□□□ 1.94
PDLIM2-216ENST00000464275 BCL11AQ9H165 835 aa27.15■■□□□ 1.94
PDLIM2-216ENST00000464275 WDR17Q8IZU2 1322 aa27.14■■□□□ 1.94
PDLIM2-216ENST00000464275 PHAXQ9H814 394 aaKnown RBP27.14■■□□□ 1.94
PDLIM2-216ENST00000464275 SEC24BO95487 1268 aa27.13■■□□□ 1.93
PDLIM2-216ENST00000464275 GNAI3P08754 354 aa27.13■■□□□ 1.93
PDLIM2-216ENST00000464275 MRC1P22897 1456 aa27.13■■□□□ 1.93
PDLIM2-216ENST00000464275 GIGYF1O75420 1035 aaPredicted RBP27.13■■□□□ 1.93
PDLIM2-216ENST00000464275 SLC52A2Q9HAB3 445 aa27.13■■□□□ 1.93
PDLIM2-216ENST00000464275 CHPF2Q9P2E5 772 aa27.13■■□□□ 1.93
PDLIM2-216ENST00000464275 COL5A2P05997 1499 aaPredicted RBP27.12■■□□□ 1.93
PDLIM2-216ENST00000464275 HMMRO75330 724 aa27.12■■□□□ 1.93
PDLIM2-216ENST00000464275 GNAI2P04899 355 aa27.12■■□□□ 1.93
PDLIM2-216ENST00000464275 DAXXQ9UER7 740 aaPredicted RBP27.11■■□□□ 1.93
PDLIM2-216ENST00000464275 C5P01031 1676 aa27.11■■□□□ 1.93
PDLIM2-216ENST00000464275 HSP90AB1P08238 724 aaKnown RBP27.11■■□□□ 1.93
PDLIM2-216ENST00000464275 UPF2Q9HAU5 1272 aaKnown RBP27.1■■□□□ 1.93
PDLIM2-216ENST00000464275 DBF4Q9UBU7 674 aaPredicted RBP27.1■■□□□ 1.93
PDLIM2-216ENST00000464275 DCAF5Q96JK2 942 aa27.09■■□□□ 1.93
PDLIM2-216ENST00000464275 CYP27B1O15528 508 aa27.08■■□□□ 1.92
PDLIM2-216ENST00000464275 BMP2KLQ5H9B9 411 aa27.08■■□□□ 1.92
PDLIM2-216ENST00000464275 TOM1L2Q6ZVM7 507 aa27.07■■□□□ 1.92
PDLIM2-216ENST00000464275 ZNF790Q6PG37 636 aa27.06■■□□□ 1.92
PDLIM2-216ENST00000464275 ROBO1Q9Y6N7 1651 aa27.06■■□□□ 1.92
PDLIM2-216ENST00000464275 SHANK3Q9BYB0 1731 aa27.05■■□□□ 1.92
PDLIM2-216ENST00000464275 SRCIN1Q9C0H9 1055 aa27.05■■□□□ 1.92
PDLIM2-216ENST00000464275 NFATC2IPQ8NCF5 419 aa27.04■■□□□ 1.92
PDLIM2-216ENST00000464275 DNAAF4Q8WXU2 420 aa27.04■■□□□ 1.92
PDLIM2-216ENST00000464275 CARD10Q9BWT7 1032 aa27.04■■□□□ 1.92
PDLIM2-216ENST00000464275 USP44Q9H0E7 712 aa27.03■■□□□ 1.92
PDLIM2-216ENST00000464275 ATP8B2P98198 1209 aa27.02■■□□□ 1.92
PDLIM2-216ENST00000464275 HYPKQ9NX55 129 aa27.02■■□□□ 1.92
PDLIM2-216ENST00000464275 LAMB4A4D0S4 1761 aa27.02■■□□□ 1.92
PDLIM2-216ENST00000464275 AHDC1Q5TGY3 1603 aaPredicted RBP27.01■■□□□ 1.91
PDLIM2-216ENST00000464275 PI4KAP2A4QPH2 592 aa27.01■■□□□ 1.91
PDLIM2-216ENST00000464275 ANXA1P04083 346 aa27.01■■□□□ 1.91
PDLIM2-216ENST00000464275 UBTFL1P0CB47 393 aaPredicted RBP27.01■■□□□ 1.91
PDLIM2-216ENST00000464275 SLC39A6Q13433 755 aa27.01■■□□□ 1.91
PDLIM2-216ENST00000464275 PI4KAP1Q8N8J0 262 aa27.01■■□□□ 1.91
PDLIM2-216ENST00000464275 ZCRB1Q8TBF4 217 aaKnown RBP27.01■■□□□ 1.91
PDLIM2-216ENST00000464275 PCDH11XQ9BZA7 1347 aa27.01■■□□□ 1.91
PDLIM2-216ENST00000464275 PCDH11YQ9BZA8 1340 aa27.01■■□□□ 1.91
PDLIM2-216ENST00000464275 ADCY9O60503 1353 aa27.01■■□□□ 1.91
PDLIM2-216ENST00000464275 TBC1D32Q96NH3 1257 aa27■■□□□ 1.91
PDLIM2-216ENST00000464275 PRAMEF22A3QJZ6 481 aa27■■□□□ 1.91
PDLIM2-216ENST00000464275 BEND3Q5T5X7 828 aa27■■□□□ 1.91
PDLIM2-216ENST00000464275 PLEKHM2Q8IWE5 1019 aa27■■□□□ 1.91
PDLIM2-216ENST00000464275 COL22A1Q8NFW1 1626 aaPredicted RBP27■■□□□ 1.91
PDLIM2-216ENST00000464275 DDX21Q9NR30 783 aaKnown RBP eCLIP27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms