RNA–Protein interactions for RNA: ENST00000464011.1

TFRC-208, Transcript of transferrin receptor, humanhuman

TSL 4

Gene TFRC, Length 546 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-208ENST00000464011 A0A0G2JLW4 131 aa15.27■□□□□ 0.04
TFRC-208ENST00000464011 MMP10P09238 476 aa15.27■□□□□ 0.04
TFRC-208ENST00000464011 CREBZFQ9NS37 354 aa15.26■□□□□ 0.03
TFRC-208ENST00000464011 VIRMAQ69YN4 1812 aaKnown RBP15.25■□□□□ 0.03
TFRC-208ENST00000464011 DPEP1P16444 411 aa15.25■□□□□ 0.03
TFRC-208ENST00000464011 SMIM5Q71RC9 77 aa15.25■□□□□ 0.03
TFRC-208ENST00000464011 TIAM2Q8IVF5 1701 aa15.25■□□□□ 0.03
TFRC-208ENST00000464011 KDM6AO15550 1401 aaPredicted RBP15.25■□□□□ 0.03
TFRC-208ENST00000464011 CNTNAP1P78357 1384 aa15.24■□□□□ 0.03
TFRC-208ENST00000464011 RGPD2P0DJD1 1756 aa15.24■□□□□ 0.03
TFRC-208ENST00000464011 ZCRB1Q8TBF4 217 aaKnown RBP15.24■□□□□ 0.03
TFRC-208ENST00000464011 AIDAQ96BJ3 306 aa15.24■□□□□ 0.03
TFRC-208ENST00000464011 DCAF5Q96JK2 942 aa15.24■□□□□ 0.03
TFRC-208ENST00000464011 MKRN1Q9UHC7 482 aaKnown RBP15.24■□□□□ 0.03
TFRC-208ENST00000464011 ITGB4P16144 1822 aa15.24■□□□□ 0.03
TFRC-208ENST00000464011 VEGFAP15692 232 aaPredicted RBP15.23■□□□□ 0.03
TFRC-208ENST00000464011 KTN1Q86UP2 1357 aaKnown RBP15.22■□□□□ 0.03
TFRC-208ENST00000464011 KCNA3P22001 575 aa15.21■□□□□ 0.03
TFRC-208ENST00000464011 LBX1P52954 281 aa15.21■□□□□ 0.03
TFRC-208ENST00000464011 TNRC18O15417 2968 aaPredicted RBP15.21■□□□□ 0.02
TFRC-208ENST00000464011 GLTPD2A6NH11 291 aa15.19■□□□□ 0.02
TFRC-208ENST00000464011 CCDC87Q9NVE4 849 aa15.19■□□□□ 0.02
TFRC-208ENST00000464011 WBP1LQ9NX94 342 aa15.19■□□□□ 0.02
TFRC-208ENST00000464011 EVC2Q86UK5 1308 aa15.18■□□□□ 0.02
TFRC-208ENST00000464011 SMARCC1Q92922 1105 aaPredicted RBP15.18■□□□□ 0.02
TFRC-208ENST00000464011 PIM2Q9P1W9 311 aa15.18■□□□□ 0.02
TFRC-208ENST00000464011 CCDC85CA6NKD9 419 aa15.17■□□□□ 0.02
TFRC-208ENST00000464011 HSPA8P11142 646 aaKnown RBP15.17■□□□□ 0.02
TFRC-208ENST00000464011 LINC00116Q8NCU8 138 aa15.17■□□□□ 0.02
TFRC-208ENST00000464011 IP6K1Q92551 441 aa15.17■□□□□ 0.02
TFRC-208ENST00000464011 CGNL1Q0VF96 1302 aa15.17■□□□□ 0.02
TFRC-208ENST00000464011 GNPATO15228 680 aa15.16■□□□□ 0.02
TFRC-208ENST00000464011 NBPF1Q3BBV0 1214 aa15.16■□□□□ 0.02
TFRC-208ENST00000464011 DALRD3Q5D0E6 543 aaKnown RBP15.16■□□□□ 0.02
TFRC-208ENST00000464011 SBNO2Q9Y2G9 1366 aa15.15■□□□□ 0.02
TFRC-208ENST00000464011 NME9Q86XW9 330 aa15.15■□□□□ 0.02
TFRC-208ENST00000464011 NLGN1Q8N2Q7 840 aa15.15■□□□□ 0.02
TFRC-208ENST00000464011 CCDC88AQ3V6T2 1871 aa15.14■□□□□ 0.01
TFRC-208ENST00000464011 MPRIPQ6WCQ1 1025 aa15.14■□□□□ 0.01
TFRC-208ENST00000464011 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.14■□□□□ 0.01
TFRC-208ENST00000464011 LTV1Q96GA3 475 aaPredicted RBP15.14■□□□□ 0.01
TFRC-208ENST00000464011 PCDH11XQ9BZA7 1347 aa15.14■□□□□ 0.01
TFRC-208ENST00000464011 PCDH11YQ9BZA8 1340 aa15.14■□□□□ 0.01
TFRC-208ENST00000464011 POTECB2RU33 542 aa15.13■□□□□ 0.01
TFRC-208ENST00000464011 THSD7BQ9C0I4 1608 aa15.13■□□□□ 0.01
TFRC-208ENST00000464011 CD163L1Q9NR16 1453 aa15.13■□□□□ 0.01
TFRC-208ENST00000464011 LOC102724428A0A0B4J2F2 783 aa15.12■□□□□ 0.01
TFRC-208ENST00000464011 VEGFBP49765 207 aa15.12■□□□□ 0.01
TFRC-208ENST00000464011 SIK1P57059 783 aa15.12■□□□□ 0.01
TFRC-208ENST00000464011 TMF1P82094 1093 aa15.12■□□□□ 0.01
TFRC-208ENST00000464011 RASSF7Q02833 373 aa15.12■□□□□ 0.01
TFRC-208ENST00000464011 CHADLQ6NUI6 762 aa15.12■□□□□ 0.01
TFRC-208ENST00000464011 LMNB1P20700 586 aa15.11■□□□□ 0.01
TFRC-208ENST00000464011 ZNF831Q5JPB2 1677 aa15.11■□□□□ 0.01
TFRC-208ENST00000464011 DLEC1Q9Y238 1755 aa15.11■□□□□ 0.01
TFRC-208ENST00000464011 PARP3Q9Y6F1 533 aa15.1■□□□□ 0.01
TFRC-208ENST00000464011 PASKQ96RG2 1323 aa15.1■□□□□ 0.01
TFRC-208ENST00000464011 DICER1Q9UPY3 1922 aaKnown RBP15.09■□□□□ 0.01
TFRC-208ENST00000464011 EDC4Q6P2E9 1401 aaKnown RBP15.09■□□□□ 0.01
TFRC-208ENST00000464011 COL5A3P25940 1745 aaPredicted RBP15.09■□□□□ 0.01
TFRC-208ENST00000464011 ITPK1Q13572 414 aa15.09■□□□□ 0.01
TFRC-208ENST00000464011 GYS1P13807 737 aa15.08■□□□□ 0
TFRC-208ENST00000464011 HOXC9P31274 260 aa15.08■□□□□ 0
TFRC-208ENST00000464011 PIGBQ92521 554 aa15.08■□□□□ 0
TFRC-208ENST00000464011 RAPGEF4Q8WZA2 1011 aa15.07■□□□□ 0
TFRC-208ENST00000464011 RTL1A6NKG5 1358 aa15.07■□□□□ 0
TFRC-208ENST00000464011 MAP2K1Q02750 393 aaPredicted RBP15.06■□□□□ 0
TFRC-208ENST00000464011 TRAPPC3LQ5T215 181 aa15.06■□□□□ 0
TFRC-208ENST00000464011 RTCBQ9Y3I0 505 aaKnown RBP15.06■□□□□ 0
TFRC-208ENST00000464011 MAP3K19Q56UN5 1328 aa15.06■□□□□ 0
TFRC-208ENST00000464011 KDRP35968 1356 aa15.06■□□□□ 0
TFRC-208ENST00000464011 CYP27B1O15528 508 aa15.05■□□□□ -0
TFRC-208ENST00000464011 CHRNA5P30532 468 aa15.05■□□□□ -0
TFRC-208ENST00000464011 SMG6Q86US8 1419 aaKnown RBP15.05■□□□□ -0
TFRC-208ENST00000464011 TMEM88BA6NKF7 163 aa15.04■□□□□ -0
TFRC-208ENST00000464011 POTEIP0CG38 1075 aa15.04■□□□□ -0
TFRC-208ENST00000464011 POTEJP0CG39 1038 aa15.04■□□□□ -0
TFRC-208ENST00000464011 TATP17735 454 aaPredicted RBP15.04■□□□□ -0
TFRC-208ENST00000464011 NBPF6Q5VWK0 638 aa15.04■□□□□ -0
TFRC-208ENST00000464011 NBPF4Q96M43 638 aa15.04■□□□□ -0
TFRC-208ENST00000464011 RASSF10A6NK89 507 aa15.03■□□□□ -0
TFRC-208ENST00000464011 ATP6V1AP38606 617 aa15.03■□□□□ -0
TFRC-208ENST00000464011 DPY19L2Q6NUT2 758 aa15.03■□□□□ -0
TFRC-208ENST00000464011 ARHGEF1Q92888 912 aaKnown RBP15.03■□□□□ -0
TFRC-208ENST00000464011 LTBP1Q14766 1721 aa15.03■□□□□ -0
TFRC-208ENST00000464011 MYH14Q7Z406 1995 aaKnown RBP15.02■□□□□ -0
TFRC-208ENST00000464011 SCN4AP35499 1836 aa15.02■□□□□ -0
TFRC-208ENST00000464011 PRPF38BQ5VTL8 546 aaKnown RBP15.02■□□□□ -0
TFRC-208ENST00000464011 USHBP1Q8N6Y0 703 aa15.02■□□□□ -0
TFRC-208ENST00000464011 AMPHP49418 695 aa15.01□□□□□ -0.01
TFRC-208ENST00000464011 DDR1Q08345 913 aa15.01□□□□□ -0.01
TFRC-208ENST00000464011 MKRN4PQ13434 485 aaPredicted RBP15.01□□□□□ -0.01
TFRC-208ENST00000464011 CFAP44Q96MT7 982 aa15.01□□□□□ -0.01
TFRC-208ENST00000464011 ADAMTSL1Q8N6G6 1762 aa15.01□□□□□ -0.01
TFRC-208ENST00000464011 RAB3GAP2Q9H2M9 1393 aa15□□□□□ -0.01
TFRC-208ENST00000464011 CNTNAP4Q9C0A0 1308 aa15□□□□□ -0.01
TFRC-208ENST00000464011 SPDYE2BA6NHP3 402 aa15□□□□□ -0.01
TFRC-208ENST00000464011 NFKBIEO00221 500 aa15□□□□□ -0.01
TFRC-208ENST00000464011 SPDYE6P0CI01 402 aa15□□□□□ -0.01
TFRC-208ENST00000464011 RFC4P35249 363 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms