RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 ATP6V1AP38606 617 aa21.1■□□□□ 0.97
SF3A3-203ENST00000461869 IFNL2Q8IZJ0 200 aa21.1■□□□□ 0.97
SF3A3-203ENST00000461869 ADCY9O60503 1353 aa21.1■□□□□ 0.97
SF3A3-203ENST00000461869 PHKG2P15735 406 aa21.09■□□□□ 0.97
SF3A3-203ENST00000461869 ITPK1Q13572 414 aa21.09■□□□□ 0.97
SF3A3-203ENST00000461869 POLKQ9UBT6 870 aa21.08■□□□□ 0.97
SF3A3-203ENST00000461869 MAP2P11137 1827 aaKnown RBP21.08■□□□□ 0.96
SF3A3-203ENST00000461869 POLR3GLQ9BT43 218 aa21.07■□□□□ 0.96
SF3A3-203ENST00000461869 ATG3Q9NT62 314 aa21.07■□□□□ 0.96
SF3A3-203ENST00000461869 ANKRD26Q9UPS8 1709 aa21.06■□□□□ 0.96
SF3A3-203ENST00000461869 MMP10P09238 476 aa21.05■□□□□ 0.96
SF3A3-203ENST00000461869 IFFO2Q5TF58 517 aa21.05■□□□□ 0.96
SF3A3-203ENST00000461869 EIF4A2Q14240 407 aaKnown RBP21.04■□□□□ 0.96
SF3A3-203ENST00000461869 HSPA6P17066 643 aa21.03■□□□□ 0.96
SF3A3-203ENST00000461869 TNNT2P45379 298 aaPredicted RBP21.03■□□□□ 0.96
SF3A3-203ENST00000461869 TRAPPC3LQ5T215 181 aa21.02■□□□□ 0.96
SF3A3-203ENST00000461869 RTCBQ9Y3I0 505 aaKnown RBP21.02■□□□□ 0.96
SF3A3-203ENST00000461869 RBM42Q9BTD8 480 aaKnown RBP21.01■□□□□ 0.95
SF3A3-203ENST00000461869 NLGN1Q8N2Q7 840 aa21■□□□□ 0.95
SF3A3-203ENST00000461869 ERVV-2B6SEH9 535 aa20.99■□□□□ 0.95
SF3A3-203ENST00000461869 ANP32CO43423 234 aa20.99■□□□□ 0.95
SF3A3-203ENST00000461869 TGFB2P61812 414 aa20.99■□□□□ 0.95
SF3A3-203ENST00000461869 KDRP35968 1356 aa20.98■□□□□ 0.95
SF3A3-203ENST00000461869 KIF3CO14782 793 aa20.98■□□□□ 0.95
SF3A3-203ENST00000461869 HSP90AB1P08238 724 aaKnown RBP20.98■□□□□ 0.95
SF3A3-203ENST00000461869 SLC4A9Q96Q91 983 aa20.98■□□□□ 0.95
SF3A3-203ENST00000461869 PXDNLA1KZ92 1463 aa20.98■□□□□ 0.95
SF3A3-203ENST00000461869 PLEKHG2Q9H7P9 1386 aa20.97■□□□□ 0.95
SF3A3-203ENST00000461869 A0A0G2JLW4 131 aa20.97■□□□□ 0.95
SF3A3-203ENST00000461869 RC3H1Q5TC82 1133 aaKnown RBP20.97■□□□□ 0.95
SF3A3-203ENST00000461869 ARHGEF1Q92888 912 aaKnown RBP20.97■□□□□ 0.95
SF3A3-203ENST00000461869 DCAF5Q96JK2 942 aa20.97■□□□□ 0.95
SF3A3-203ENST00000461869 BCS1LQ9Y276 419 aa20.97■□□□□ 0.95
SF3A3-203ENST00000461869 ADRA2BP18089 450 aa20.96■□□□□ 0.95
SF3A3-203ENST00000461869 PLEKHO1Q53GL0 409 aaPredicted RBP20.96■□□□□ 0.95
SF3A3-203ENST00000461869 RFC4P35249 363 aa20.95■□□□□ 0.94
SF3A3-203ENST00000461869 CABP4P57796 275 aa20.95■□□□□ 0.94
SF3A3-203ENST00000461869 CCDC87Q9NVE4 849 aa20.95■□□□□ 0.94
SF3A3-203ENST00000461869 CICQ96RK0 1608 aaPredicted RBP20.95■□□□□ 0.94
SF3A3-203ENST00000461869 RPS6KA4O75676 772 aa20.94■□□□□ 0.94
SF3A3-203ENST00000461869 GYS1P13807 737 aa20.94■□□□□ 0.94
SF3A3-203ENST00000461869 CNTNAP4Q9C0A0 1308 aa20.94■□□□□ 0.94
SF3A3-203ENST00000461869 AMOTQ4VCS5 1084 aa20.93■□□□□ 0.94
SF3A3-203ENST00000461869 ZNF530Q6P9A1 599 aaPredicted RBP20.93■□□□□ 0.94
SF3A3-203ENST00000461869 ARHGAP27Q6ZUM4 889 aa20.93■□□□□ 0.94
SF3A3-203ENST00000461869 MIER1Q8N108 512 aa20.93■□□□□ 0.94
SF3A3-203ENST00000461869 PARP3Q9Y6F1 533 aa20.93■□□□□ 0.94
SF3A3-203ENST00000461869 KIF13BQ9NQT8 1826 aa20.92■□□□□ 0.94
SF3A3-203ENST00000461869 DPEP1P16444 411 aa20.92■□□□□ 0.94
SF3A3-203ENST00000461869 C10orf71Q711Q0 1435 aa20.92■□□□□ 0.94
SF3A3-203ENST00000461869 ZNF831Q5JPB2 1677 aa20.92■□□□□ 0.94
SF3A3-203ENST00000461869 KDM6AO15550 1401 aaPredicted RBP20.91■□□□□ 0.94
SF3A3-203ENST00000461869 MTHFSP49914 203 aa20.91■□□□□ 0.94
SF3A3-203ENST00000461869 N4BP2Q86UW6 1770 aaPredicted RBP20.91■□□□□ 0.94
SF3A3-203ENST00000461869 PANK3Q9H999 370 aa20.91■□□□□ 0.94
SF3A3-203ENST00000461869 CEP350Q5VT06 3117 aa20.91■□□□□ 0.94
SF3A3-203ENST00000461869 KIAA1551Q9HCM1 1747 aa20.9■□□□□ 0.94
SF3A3-203ENST00000461869 PTCD1O75127 700 aaKnown RBP20.9■□□□□ 0.94
SF3A3-203ENST00000461869 FCHSD2O94868 740 aa20.9■□□□□ 0.94
SF3A3-203ENST00000461869 C1orf141Q5JVX7 400 aa20.89■□□□□ 0.93
SF3A3-203ENST00000461869 C4AP0C0L4 1744 aa20.88■□□□□ 0.93
SF3A3-203ENST00000461869 COL5A3P25940 1745 aaPredicted RBP20.88■□□□□ 0.93
SF3A3-203ENST00000461869 TOMM70O94826 608 aa20.88■□□□□ 0.93
SF3A3-203ENST00000461869 CRKLP46109 303 aaKnown RBP20.87■□□□□ 0.93
SF3A3-203ENST00000461869 APLP1P51693 650 aa20.87■□□□□ 0.93
SF3A3-203ENST00000461869 AEBP1Q8IUX7 1158 aa20.87■□□□□ 0.93
SF3A3-203ENST00000461869 NFATC2IPQ8NCF5 419 aa20.87■□□□□ 0.93
SF3A3-203ENST00000461869 KCNA3P22001 575 aa20.86■□□□□ 0.93
SF3A3-203ENST00000461869 MORC1Q86VD1 984 aa20.86■□□□□ 0.93
SF3A3-203ENST00000461869 NMRK2Q9NPI5 230 aa20.85■□□□□ 0.93
SF3A3-203ENST00000461869 PIM2Q9P1W9 311 aa20.85■□□□□ 0.93
SF3A3-203ENST00000461869 SRP68Q9UHB9 627 aaKnown RBP20.85■□□□□ 0.93
SF3A3-203ENST00000461869 FKBP8Q14318 412 aa20.84■□□□□ 0.93
SF3A3-203ENST00000461869 SULT6B1Q6IMI4 303 aa20.84■□□□□ 0.93
SF3A3-203ENST00000461869 USP42Q9H9J4 1324 aaKnown RBP20.83■□□□□ 0.93
SF3A3-203ENST00000461869 CCER2I3L3R5 266 aa20.83■□□□□ 0.93
SF3A3-203ENST00000461869 C9orf131Q5VYM1 1079 aa20.83■□□□□ 0.93
SF3A3-203ENST00000461869 KNSTRNQ9Y448 316 aa20.83■□□□□ 0.93
SF3A3-203ENST00000461869 PER1O15534 1290 aaPredicted RBP20.82■□□□□ 0.92
SF3A3-203ENST00000461869 DALRD3Q5D0E6 543 aaKnown RBP20.82■□□□□ 0.92
SF3A3-203ENST00000461869 PRKRIP1Q9H875 184 aaPredicted RBP20.82■□□□□ 0.92
SF3A3-203ENST00000461869 MYH14Q7Z406 1995 aaKnown RBP20.82■□□□□ 0.92
SF3A3-203ENST00000461869 NPC1L1Q9UHC9 1359 aa20.82■□□□□ 0.92
SF3A3-203ENST00000461869 DDR1Q08345 913 aa20.81■□□□□ 0.92
SF3A3-203ENST00000461869 INTS5Q6P9B9 1019 aaKnown RBP20.8■□□□□ 0.92
SF3A3-203ENST00000461869 BRCA1P38398 1863 aaKnown RBP20.79■□□□□ 0.92
SF3A3-203ENST00000461869 IL13P35225 146 aa20.79■□□□□ 0.92
SF3A3-203ENST00000461869 RALBP1Q15311 655 aa20.79■□□□□ 0.92
SF3A3-203ENST00000461869 C16orf71Q8IYS4 520 aaPredicted RBP20.79■□□□□ 0.92
SF3A3-203ENST00000461869 DNAJC5GQ8N7S2 189 aa20.79■□□□□ 0.92
SF3A3-203ENST00000461869 CHRNA5P30532 468 aa20.78■□□□□ 0.92
SF3A3-203ENST00000461869 AKAP4Q5JQC9 854 aa20.78■□□□□ 0.92
SF3A3-203ENST00000461869 RBM46Q8TBY0 533 aaKnown RBP20.78■□□□□ 0.92
SF3A3-203ENST00000461869 POLRMTO00411 1230 aaKnown RBP20.77■□□□□ 0.92
SF3A3-203ENST00000461869 ZPR1O75312 459 aa20.77■□□□□ 0.92
SF3A3-203ENST00000461869 TM4SF1P30408 202 aa20.77■□□□□ 0.92
SF3A3-203ENST00000461869 DNAJC10Q8IXB1 793 aa20.77■□□□□ 0.92
SF3A3-203ENST00000461869 RNF181Q9P0P0 153 aa20.77■□□□□ 0.92
SF3A3-203ENST00000461869 TJP1Q07157 1748 aa20.77■□□□□ 0.92
SF3A3-203ENST00000461869 USPL1Q5W0Q7 1092 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms