RNA–Protein interactions for RNA: ENST00000461525.5

COL1A2-202, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL1A2, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-202ENST00000461525 MTHFSP49914 203 aa24.03■■□□□ 1.44
COL1A2-202ENST00000461525 ITPK1Q13572 414 aa24.03■■□□□ 1.44
COL1A2-202ENST00000461525 GPR162Q16538 588 aa24.03■■□□□ 1.44
COL1A2-202ENST00000461525 CC2D1BQ5T0F9 858 aaKnown RBP24.03■■□□□ 1.44
COL1A2-202ENST00000461525 AMIGO3Q86WK7 504 aa24.03■■□□□ 1.44
COL1A2-202ENST00000461525 KDM6AO15550 1401 aaPredicted RBP24.02■■□□□ 1.44
COL1A2-202ENST00000461525 SSFA2P28290 1259 aa24.02■■□□□ 1.44
COL1A2-202ENST00000461525 CABP4P57796 275 aa24.02■■□□□ 1.44
COL1A2-202ENST00000461525 TAF1LQ8IZX4 1826 aa24.01■■□□□ 1.43
COL1A2-202ENST00000461525 GNPATO15228 680 aa24.01■■□□□ 1.43
COL1A2-202ENST00000461525 NLGN2Q8NFZ4 835 aa24.01■■□□□ 1.43
COL1A2-202ENST00000461525 SMIM5Q71RC9 77 aa24■■□□□ 1.43
COL1A2-202ENST00000461525 PELP1Q8IZL8 1130 aaKnown RBP24■■□□□ 1.43
COL1A2-202ENST00000461525 RBM42Q9BTD8 480 aaKnown RBP23.99■■□□□ 1.43
COL1A2-202ENST00000461525 NPC1L1Q9UHC9 1359 aa23.96■■□□□ 1.43
COL1A2-202ENST00000461525 CNGB1Q14028 1251 aaPredicted RBP23.95■■□□□ 1.42
COL1A2-202ENST00000461525 SLC4A9Q96Q91 983 aa23.95■■□□□ 1.42
COL1A2-202ENST00000461525 CD2APQ9Y5K6 639 aa23.95■■□□□ 1.42
COL1A2-202ENST00000461525 DIAPH1O60610 1272 aaKnown RBP23.94■■□□□ 1.42
COL1A2-202ENST00000461525 HMOX1P09601 288 aa23.94■■□□□ 1.42
COL1A2-202ENST00000461525 AKAP4Q5JQC9 854 aa23.94■■□□□ 1.42
COL1A2-202ENST00000461525 NFATC2IPQ8NCF5 419 aa23.93■■□□□ 1.42
COL1A2-202ENST00000461525 RTCBQ9Y3I0 505 aaKnown RBP23.93■■□□□ 1.42
COL1A2-202ENST00000461525 UBR3Q6ZT12 1888 aa23.93■■□□□ 1.42
COL1A2-202ENST00000461525 ZNF784Q8NCA9 323 aaPredicted RBP23.92■■□□□ 1.42
COL1A2-202ENST00000461525 CNTNAP4Q9C0A0 1308 aa23.91■■□□□ 1.42
COL1A2-202ENST00000461525 PTCD1O75127 700 aaKnown RBP23.91■■□□□ 1.42
COL1A2-202ENST00000461525 RC3H1Q5TC82 1133 aaKnown RBP23.91■■□□□ 1.42
COL1A2-202ENST00000461525 UTRNP46939 3433 aa23.9■■□□□ 1.42
COL1A2-202ENST00000461525 GRIN3BO60391 1043 aa23.89■■□□□ 1.41
COL1A2-202ENST00000461525 YBX3P16989 372 aaKnown RBP eCLIP23.89■■□□□ 1.41
COL1A2-202ENST00000461525 TRAPPC3LQ5T215 181 aa23.89■■□□□ 1.41
COL1A2-202ENST00000461525 ADRA2BP18089 450 aa23.88■■□□□ 1.41
COL1A2-202ENST00000461525 SLC52A2Q9HAB3 445 aa23.87■■□□□ 1.41
COL1A2-202ENST00000461525 ZNF831Q5JPB2 1677 aa23.86■■□□□ 1.41
COL1A2-202ENST00000461525 RPS6KA4O75676 772 aa23.86■■□□□ 1.41
COL1A2-202ENST00000461525 U2SURPO15042 1029 aaKnown RBP23.85■■□□□ 1.41
COL1A2-202ENST00000461525 RNMTO43148 476 aaKnown RBP23.85■■□□□ 1.41
COL1A2-202ENST00000461525 MMP10P09238 476 aa23.85■■□□□ 1.41
COL1A2-202ENST00000461525 MTHFSDQ2M296 383 aaKnown RBP23.85■■□□□ 1.41
COL1A2-202ENST00000461525 ARHGEF1Q92888 912 aaKnown RBP23.85■■□□□ 1.41
COL1A2-202ENST00000461525 LGR6Q9HBX8 967 aa23.85■■□□□ 1.41
COL1A2-202ENST00000461525 COL3A1P02461 1466 aaPredicted RBP23.85■■□□□ 1.41
COL1A2-202ENST00000461525 RFC4P35249 363 aa23.84■■□□□ 1.41
COL1A2-202ENST00000461525 NLGN1Q8N2Q7 840 aa23.84■■□□□ 1.41
COL1A2-202ENST00000461525 CRKLP46109 303 aaKnown RBP23.83■■□□□ 1.41
COL1A2-202ENST00000461525 MRC1P22897 1456 aa23.82■■□□□ 1.4
COL1A2-202ENST00000461525 GYS1P13807 737 aa23.8■■□□□ 1.4
COL1A2-202ENST00000461525 COL5A3P25940 1745 aaPredicted RBP23.8■■□□□ 1.4
COL1A2-202ENST00000461525 CFAP53Q96M91 514 aa23.8■■□□□ 1.4
COL1A2-202ENST00000461525 CHD4Q14839 1912 aa23.8■■□□□ 1.4
COL1A2-202ENST00000461525 SCN11AQ9UI33 1791 aa23.79■■□□□ 1.4
COL1A2-202ENST00000461525 SLC39A6Q13433 755 aa23.78■■□□□ 1.4
COL1A2-202ENST00000461525 DNAJC10Q8IXB1 793 aa23.78■■□□□ 1.4
COL1A2-202ENST00000461525 GAS2L2Q8NHY3 880 aa23.77■■□□□ 1.4
COL1A2-202ENST00000461525 WWC3Q9ULE0 1092 aa23.77■■□□□ 1.4
COL1A2-202ENST00000461525 INTS5Q6P9B9 1019 aaKnown RBP23.76■■□□□ 1.39
COL1A2-202ENST00000461525 CICQ96RK0 1608 aaPredicted RBP23.75■■□□□ 1.39
COL1A2-202ENST00000461525 CCDC87Q9NVE4 849 aa23.75■■□□□ 1.39
COL1A2-202ENST00000461525 SRP68Q9UHB9 627 aaKnown RBP23.75■■□□□ 1.39
COL1A2-202ENST00000461525 PARP3Q9Y6F1 533 aa23.75■■□□□ 1.39
COL1A2-202ENST00000461525 TJP1Q07157 1748 aa23.74■■□□□ 1.39
COL1A2-202ENST00000461525 GOLGB1Q14789 3259 aaKnown RBP23.74■■□□□ 1.39
COL1A2-202ENST00000461525 NUDCQ9Y266 331 aa23.74■■□□□ 1.39
COL1A2-202ENST00000461525 USP42Q9H9J4 1324 aaKnown RBP23.74■■□□□ 1.39
COL1A2-202ENST00000461525 GNAT3A8MTJ3 354 aa23.73■■□□□ 1.39
COL1A2-202ENST00000461525 C10orf71Q711Q0 1435 aa23.73■■□□□ 1.39
COL1A2-202ENST00000461525 ADAMTS7Q9UKP4 1686 aa23.73■■□□□ 1.39
COL1A2-202ENST00000461525 CYP19A1P11511 503 aaPredicted RBP23.72■■□□□ 1.39
COL1A2-202ENST00000461525 PPP2R1AP30153 589 aa23.72■■□□□ 1.39
COL1A2-202ENST00000461525 PRKAR2BP31323 418 aa23.72■■□□□ 1.39
COL1A2-202ENST00000461525 TGFB2P61812 414 aa23.72■■□□□ 1.39
COL1A2-202ENST00000461525 TEFQ10587 303 aa23.72■■□□□ 1.39
COL1A2-202ENST00000461525 TTC5Q8N0Z6 440 aa23.72■■□□□ 1.39
COL1A2-202ENST00000461525 PXDNLA1KZ92 1463 aa23.72■■□□□ 1.39
COL1A2-202ENST00000461525 KCPQ6ZWJ8 1503 aa23.72■■□□□ 1.39
COL1A2-202ENST00000461525 MYH14Q7Z406 1995 aaKnown RBP23.72■■□□□ 1.39
COL1A2-202ENST00000461525 SOS1Q07889 1333 aaPredicted RBP23.71■■□□□ 1.39
COL1A2-202ENST00000461525 VSIG10Q8N0Z9 540 aa23.71■■□□□ 1.39
COL1A2-202ENST00000461525 FKBP8Q14318 412 aa23.7■■□□□ 1.38
COL1A2-202ENST00000461525 IL17REQ8NFR9 667 aa23.7■■□□□ 1.38
COL1A2-202ENST00000461525 RSPH6AQ9H0K4 717 aa23.7■■□□□ 1.38
COL1A2-202ENST00000461525 ZPR1O75312 459 aa23.69■■□□□ 1.38
COL1A2-202ENST00000461525 C4AP0C0L4 1744 aa23.69■■□□□ 1.38
COL1A2-202ENST00000461525 U2AF1L5P0DN76 240 aaPredicted RBP23.68■■□□□ 1.38
COL1A2-202ENST00000461525 U2AF1Q01081 240 aaKnown RBP eCLIP23.68■■□□□ 1.38
COL1A2-202ENST00000461525 PHACTR3Q96KR7 559 aa23.68■■□□□ 1.38
COL1A2-202ENST00000461525 ZBTB1Q9Y2K1 713 aa23.68■■□□□ 1.38
COL1A2-202ENST00000461525 A0A0G2JLW4 131 aa23.67■■□□□ 1.38
COL1A2-202ENST00000461525 GIGYF1O75420 1035 aaPredicted RBP23.67■■□□□ 1.38
COL1A2-202ENST00000461525 ATP10DQ9P241 1426 aa23.67■■□□□ 1.38
COL1A2-202ENST00000461525 DDR1Q08345 913 aa23.66■■□□□ 1.38
COL1A2-202ENST00000461525 USPL1Q5W0Q7 1092 aa23.66■■□□□ 1.38
COL1A2-202ENST00000461525 ZNF790Q6PG37 636 aa23.66■■□□□ 1.38
COL1A2-202ENST00000461525 COL15A1P39059 1388 aa23.65■■□□□ 1.38
COL1A2-202ENST00000461525 STARD3NLO95772 234 aa23.65■■□□□ 1.38
COL1A2-202ENST00000461525 DPEP1P16444 411 aa23.65■■□□□ 1.38
COL1A2-202ENST00000461525 C1QTNF8P60827 252 aa23.65■■□□□ 1.38
COL1A2-202ENST00000461525 ZNF496Q96IT1 587 aaPredicted RBP23.65■■□□□ 1.38
COL1A2-202ENST00000461525 BCS1LQ9Y276 419 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms