RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 DCAF8L1A6NGE4 600 aa21.04■□□□□ 0.96
NUP50-213ENST00000461437 POLD1P28340 1107 aa21.04■□□□□ 0.96
NUP50-213ENST00000461437 ATP6V1AP38606 617 aa21.04■□□□□ 0.96
NUP50-213ENST00000461437 AMOTQ4VCS5 1084 aa21.04■□□□□ 0.96
NUP50-213ENST00000461437 COL3A1P02461 1466 aaPredicted RBP21.04■□□□□ 0.96
NUP50-213ENST00000461437 PLEKHG2Q9H7P9 1386 aa21.03■□□□□ 0.96
NUP50-213ENST00000461437 C1orf141Q5JVX7 400 aa21.03■□□□□ 0.96
NUP50-213ENST00000461437 DCAF5Q96JK2 942 aa21.03■□□□□ 0.96
NUP50-213ENST00000461437 SLC4A9Q96Q91 983 aa21.03■□□□□ 0.96
NUP50-213ENST00000461437 RBM42Q9BTD8 480 aaKnown RBP21.03■□□□□ 0.96
NUP50-213ENST00000461437 UTRNP46939 3433 aa21.03■□□□□ 0.96
NUP50-213ENST00000461437 MYH14Q7Z406 1995 aaKnown RBP21.02■□□□□ 0.96
NUP50-213ENST00000461437 ERVV-2B6SEH9 535 aa21.01■□□□□ 0.95
NUP50-213ENST00000461437 HSP90AB1P08238 724 aaKnown RBP21.01■□□□□ 0.95
NUP50-213ENST00000461437 CABP4P57796 275 aa21.01■□□□□ 0.95
NUP50-213ENST00000461437 NLGN2Q8NFZ4 835 aa21.01■□□□□ 0.95
NUP50-213ENST00000461437 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21■□□□□ 0.95
NUP50-213ENST00000461437 DIAPH1O60610 1272 aaKnown RBP21■□□□□ 0.95
NUP50-213ENST00000461437 CHD4Q14839 1912 aa21■□□□□ 0.95
NUP50-213ENST00000461437 NPC1L1Q9UHC9 1359 aa20.99■□□□□ 0.95
NUP50-213ENST00000461437 GNPATO15228 680 aa20.99■□□□□ 0.95
NUP50-213ENST00000461437 NFATC2IPQ8NCF5 419 aa20.99■□□□□ 0.95
NUP50-213ENST00000461437 MAP3K5Q99683 1374 aa20.98■□□□□ 0.95
NUP50-213ENST00000461437 TJP1Q07157 1748 aa20.98■□□□□ 0.95
NUP50-213ENST00000461437 LGR6Q9HBX8 967 aa20.98■□□□□ 0.95
NUP50-213ENST00000461437 ZNF831Q5JPB2 1677 aa20.98■□□□□ 0.95
NUP50-213ENST00000461437 U2SURPO15042 1029 aaKnown RBP20.97■□□□□ 0.95
NUP50-213ENST00000461437 PELP1Q8IZL8 1130 aaKnown RBP20.97■□□□□ 0.95
NUP50-213ENST00000461437 PTCD1O75127 700 aaKnown RBP20.96■□□□□ 0.95
NUP50-213ENST00000461437 MTHFSDQ2M296 383 aaKnown RBP20.96■□□□□ 0.95
NUP50-213ENST00000461437 C4AP0C0L4 1744 aa20.95■□□□□ 0.94
NUP50-213ENST00000461437 AKAP4Q5JQC9 854 aa20.95■□□□□ 0.94
NUP50-213ENST00000461437 FLAD1Q8NFF5 587 aa20.95■□□□□ 0.94
NUP50-213ENST00000461437 ADAMTS7Q9UKP4 1686 aa20.93■□□□□ 0.94
NUP50-213ENST00000461437 SSFA2P28290 1259 aa20.93■□□□□ 0.94
NUP50-213ENST00000461437 GOLGB1Q14789 3259 aaKnown RBP20.92■□□□□ 0.94
NUP50-213ENST00000461437 RNMTO43148 476 aaKnown RBP20.92■□□□□ 0.94
NUP50-213ENST00000461437 GPR162Q16538 588 aa20.92■□□□□ 0.94
NUP50-213ENST00000461437 MRC1P22897 1456 aa20.91■□□□□ 0.94
NUP50-213ENST00000461437 SLC39A6Q13433 755 aa20.91■□□□□ 0.94
NUP50-213ENST00000461437 WWC3Q9ULE0 1092 aa20.91■□□□□ 0.94
NUP50-213ENST00000461437 SLC52A2Q9HAB3 445 aa20.9■□□□□ 0.94
NUP50-213ENST00000461437 PPP2R1AP30153 589 aa20.89■□□□□ 0.93
NUP50-213ENST00000461437 SIPA1L3O60292 1781 aaPredicted RBP20.88■□□□□ 0.93
NUP50-213ENST00000461437 HMGB2P26583 209 aaKnown RBP20.88■□□□□ 0.93
NUP50-213ENST00000461437 RTCBQ9Y3I0 505 aaKnown RBP20.88■□□□□ 0.93
NUP50-213ENST00000461437 CICQ96RK0 1608 aaPredicted RBP20.88■□□□□ 0.93
NUP50-213ENST00000461437 UBR2Q8IWV8 1755 aa20.87■□□□□ 0.93
NUP50-213ENST00000461437 CNTNAP4Q9C0A0 1308 aa20.87■□□□□ 0.93
NUP50-213ENST00000461437 YBX3P16989 372 aaKnown RBP eCLIP20.87■□□□□ 0.93
NUP50-213ENST00000461437 ARHGEF1Q92888 912 aaKnown RBP20.87■□□□□ 0.93
NUP50-213ENST00000461437 KCPQ6ZWJ8 1503 aa20.87■□□□□ 0.93
NUP50-213ENST00000461437 CRKLP46109 303 aaKnown RBP20.86■□□□□ 0.93
NUP50-213ENST00000461437 TRAPPC3LQ5T215 181 aa20.86■□□□□ 0.93
NUP50-213ENST00000461437 DNAJC10Q8IXB1 793 aa20.86■□□□□ 0.93
NUP50-213ENST00000461437 N4BP2Q86UW6 1770 aaPredicted RBP20.86■□□□□ 0.93
NUP50-213ENST00000461437 PHACTR3Q96KR7 559 aa20.85■□□□□ 0.93
NUP50-213ENST00000461437 RPS6KA4O75676 772 aa20.84■□□□□ 0.93
NUP50-213ENST00000461437 MMP10P09238 476 aa20.84■□□□□ 0.93
NUP50-213ENST00000461437 PRKAR2BP31323 418 aa20.84■□□□□ 0.93
NUP50-213ENST00000461437 RC3H1Q5TC82 1133 aaKnown RBP20.84■□□□□ 0.93
NUP50-213ENST00000461437 CFAP53Q96M91 514 aa20.84■□□□□ 0.93
NUP50-213ENST00000461437 SRP68Q9UHB9 627 aaKnown RBP20.84■□□□□ 0.93
NUP50-213ENST00000461437 ZNF784Q8NCA9 323 aaPredicted RBP20.83■□□□□ 0.93
NUP50-213ENST00000461437 RSPH6AQ9H0K4 717 aa20.83■□□□□ 0.93
NUP50-213ENST00000461437 KIAA1551Q9HCM1 1747 aa20.83■□□□□ 0.92
NUP50-213ENST00000461437 KIF13BQ9NQT8 1826 aa20.83■□□□□ 0.92
NUP50-213ENST00000461437 INTS5Q6P9B9 1019 aaKnown RBP20.82■□□□□ 0.92
NUP50-213ENST00000461437 IL17REQ8NFR9 667 aa20.82■□□□□ 0.92
NUP50-213ENST00000461437 CD2APQ9Y5K6 639 aa20.82■□□□□ 0.92
NUP50-213ENST00000461437 U2AF1L5P0DN76 240 aaPredicted RBP20.81■□□□□ 0.92
NUP50-213ENST00000461437 GYS1P13807 737 aa20.81■□□□□ 0.92
NUP50-213ENST00000461437 RFC4P35249 363 aa20.81■□□□□ 0.92
NUP50-213ENST00000461437 U2AF1Q01081 240 aaKnown RBP eCLIP20.81■□□□□ 0.92
NUP50-213ENST00000461437 DLG5Q8TDM6 1919 aa20.8■□□□□ 0.92
NUP50-213ENST00000461437 GNAT3A8MTJ3 354 aa20.8■□□□□ 0.92
NUP50-213ENST00000461437 GAS2L2Q8NHY3 880 aa20.8■□□□□ 0.92
NUP50-213ENST00000461437 CYP19A1P11511 503 aaPredicted RBP20.77■□□□□ 0.92
NUP50-213ENST00000461437 ADRA2BP18089 450 aa20.77■□□□□ 0.92
NUP50-213ENST00000461437 CCDC87Q9NVE4 849 aa20.77■□□□□ 0.92
NUP50-213ENST00000461437 NUDCQ9Y266 331 aa20.77■□□□□ 0.92
NUP50-213ENST00000461437 KCNQ3O43525 872 aa20.76■□□□□ 0.91
NUP50-213ENST00000461437 TEFQ10587 303 aa20.76■□□□□ 0.91
NUP50-213ENST00000461437 FKBP8Q14318 412 aa20.76■□□□□ 0.91
NUP50-213ENST00000461437 ZBTB1Q9Y2K1 713 aa20.76■□□□□ 0.91
NUP50-213ENST00000461437 USP42Q9H9J4 1324 aaKnown RBP20.76■□□□□ 0.91
NUP50-213ENST00000461437 NLGN1Q8N2Q7 840 aa20.75■□□□□ 0.91
NUP50-213ENST00000461437 AFDNP55196 1824 aaKnown RBP20.75■□□□□ 0.91
NUP50-213ENST00000461437 PXDNLA1KZ92 1463 aa20.75■□□□□ 0.91
NUP50-213ENST00000461437 BRCA1P38398 1863 aaKnown RBP20.74■□□□□ 0.91
NUP50-213ENST00000461437 DCTN1Q14203 1278 aa20.74■□□□□ 0.91
NUP50-213ENST00000461437 TTC5Q8N0Z6 440 aa20.74■□□□□ 0.91
NUP50-213ENST00000461437 ZNF496Q96IT1 587 aaPredicted RBP20.74■□□□□ 0.91
NUP50-213ENST00000461437 SOS1Q07889 1333 aaPredicted RBP20.74■□□□□ 0.91
NUP50-213ENST00000461437 C10orf71Q711Q0 1435 aa20.73■□□□□ 0.91
NUP50-213ENST00000461437 CANXP27824 592 aaKnown RBP20.73■□□□□ 0.91
NUP50-213ENST00000461437 DDR1Q08345 913 aa20.73■□□□□ 0.91
NUP50-213ENST00000461437 USPL1Q5W0Q7 1092 aa20.73■□□□□ 0.91
NUP50-213ENST00000461437 MCM10Q7L590 875 aa20.73■□□□□ 0.91
NUP50-213ENST00000461437 CEMIPQ8WUJ3 1361 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms