RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 ATP6V1AP38606 617 aa16.64■□□□□ 0.25
HCFC1-204ENST00000461098 CARD14Q9BXL6 1004 aa16.64■□□□□ 0.25
HCFC1-204ENST00000461098 ATG3Q9NT62 314 aa16.64■□□□□ 0.25
HCFC1-204ENST00000461098 ANKRD26Q9UPS8 1709 aa16.63■□□□□ 0.25
HCFC1-204ENST00000461098 SLC4A9Q96Q91 983 aa16.63■□□□□ 0.25
HCFC1-204ENST00000461098 SPG7Q9UQ90 795 aa16.63■□□□□ 0.25
HCFC1-204ENST00000461098 BCS1LQ9Y276 419 aa16.63■□□□□ 0.25
HCFC1-204ENST00000461098 KDRP35968 1356 aa16.63■□□□□ 0.25
HCFC1-204ENST00000461098 TONSLQ96HA7 1378 aa16.63■□□□□ 0.25
HCFC1-204ENST00000461098 WDR90Q96KV7 1748 aa16.62■□□□□ 0.25
HCFC1-204ENST00000461098 KCNA3P22001 575 aa16.62■□□□□ 0.25
HCFC1-204ENST00000461098 EYA1Q99502 592 aa16.62■□□□□ 0.25
HCFC1-204ENST00000461098 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.62■□□□□ 0.25
HCFC1-204ENST00000461098 TMOD3Q9NYL9 352 aa16.62■□□□□ 0.25
HCFC1-204ENST00000461098 PHKG2P15735 406 aa16.61■□□□□ 0.25
HCFC1-204ENST00000461098 DPEP1P16444 411 aa16.61■□□□□ 0.25
HCFC1-204ENST00000461098 ZNF831Q5JPB2 1677 aa16.61■□□□□ 0.25
HCFC1-204ENST00000461098 C4AP0C0L4 1744 aa16.6■□□□□ 0.25
HCFC1-204ENST00000461098 HTRA3P83110 453 aa16.6■□□□□ 0.25
HCFC1-204ENST00000461098 ARHGAP27Q6ZUM4 889 aa16.6■□□□□ 0.25
HCFC1-204ENST00000461098 COL5A3P25940 1745 aaPredicted RBP16.59■□□□□ 0.25
HCFC1-204ENST00000461098 GYS1P13807 737 aa16.59■□□□□ 0.25
HCFC1-204ENST00000461098 TMF1P82094 1093 aa16.59■□□□□ 0.25
HCFC1-204ENST00000461098 TRAPPC3LQ5T215 181 aa16.59■□□□□ 0.25
HCFC1-204ENST00000461098 COL13A1Q5TAT6 717 aaPredicted RBP16.59■□□□□ 0.25
HCFC1-204ENST00000461098 NLGN1Q8N2Q7 840 aa16.59■□□□□ 0.25
HCFC1-204ENST00000461098 RBM46Q8TBY0 533 aaKnown RBP16.59■□□□□ 0.25
HCFC1-204ENST00000461098 ARHGEF1Q92888 912 aaKnown RBP16.59■□□□□ 0.25
HCFC1-204ENST00000461098 WASHC2AQ641Q2 1341 aa16.59■□□□□ 0.25
HCFC1-204ENST00000461098 IFNL2Q8IZJ0 200 aa16.58■□□□□ 0.24
HCFC1-204ENST00000461098 JMYQ8N9B5 988 aa16.58■□□□□ 0.24
HCFC1-204ENST00000461098 RTCBQ9Y3I0 505 aaKnown RBP16.58■□□□□ 0.24
HCFC1-204ENST00000461098 ARFGEF1Q9Y6D6 1849 aa16.58■□□□□ 0.24
HCFC1-204ENST00000461098 FCHSD2O94868 740 aa16.57■□□□□ 0.24
HCFC1-204ENST00000461098 C9orf131Q5VYM1 1079 aa16.57■□□□□ 0.24
HCFC1-204ENST00000461098 KLRG1Q96E93 195 aa16.57■□□□□ 0.24
HCFC1-204ENST00000461098 MYH14Q7Z406 1995 aaKnown RBP16.57■□□□□ 0.24
HCFC1-204ENST00000461098 PPM1GO15355 546 aaPredicted RBP16.56■□□□□ 0.24
HCFC1-204ENST00000461098 RC3H1Q5TC82 1133 aaKnown RBP16.56■□□□□ 0.24
HCFC1-204ENST00000461098 ADRA2BP18089 450 aa16.55■□□□□ 0.24
HCFC1-204ENST00000461098 CCDC87Q9NVE4 849 aa16.55■□□□□ 0.24
HCFC1-204ENST00000461098 KCPQ6ZWJ8 1503 aa16.55■□□□□ 0.24
HCFC1-204ENST00000461098 CNTNAP4Q9C0A0 1308 aa16.54■□□□□ 0.24
HCFC1-204ENST00000461098 RPS6KA4O75676 772 aa16.54■□□□□ 0.24
HCFC1-204ENST00000461098 DCAF5Q96JK2 942 aa16.54■□□□□ 0.24
HCFC1-204ENST00000461098 POLKQ9UBT6 870 aa16.54■□□□□ 0.24
HCFC1-204ENST00000461098 FSTL1Q12841 308 aa16.53■□□□□ 0.24
HCFC1-204ENST00000461098 SBF1O95248 1867 aa16.52■□□□□ 0.24
HCFC1-204ENST00000461098 PLEKHG2Q9H7P9 1386 aa16.52■□□□□ 0.24
HCFC1-204ENST00000461098 ERVV-2B6SEH9 535 aa16.52■□□□□ 0.24
HCFC1-204ENST00000461098 RFC4P35249 363 aa16.52■□□□□ 0.24
HCFC1-204ENST00000461098 EIF4A2Q14240 407 aaKnown RBP16.52■□□□□ 0.24
HCFC1-204ENST00000461098 RBM42Q9BTD8 480 aaKnown RBP16.52■□□□□ 0.24
HCFC1-204ENST00000461098 PARP3Q9Y6F1 533 aa16.52■□□□□ 0.24
HCFC1-204ENST00000461098 PIM2Q9P1W9 311 aa16.51■□□□□ 0.23
HCFC1-204ENST00000461098 KDM6AO15550 1401 aaPredicted RBP16.51■□□□□ 0.23
HCFC1-204ENST00000461098 DDR1Q08345 913 aa16.5■□□□□ 0.23
HCFC1-204ENST00000461098 RRAGCQ9HB90 399 aa16.5■□□□□ 0.23
HCFC1-204ENST00000461098 ADAMTS7Q9UKP4 1686 aa16.5■□□□□ 0.23
HCFC1-204ENST00000461098 FKBP8Q14318 412 aa16.49■□□□□ 0.23
HCFC1-204ENST00000461098 CDCA8Q53HL2 280 aa16.49■□□□□ 0.23
HCFC1-204ENST00000461098 C16orf71Q8IYS4 520 aaPredicted RBP16.49■□□□□ 0.23
HCFC1-204ENST00000461098 RNF181Q9P0P0 153 aa16.49■□□□□ 0.23
HCFC1-204ENST00000461098 SRP68Q9UHB9 627 aaKnown RBP16.49■□□□□ 0.23
HCFC1-204ENST00000461098 TNRC6CQ9HCJ0 1690 aaKnown RBP16.49■□□□□ 0.23
HCFC1-204ENST00000461098 KDM2BQ8NHM5 1336 aa16.48■□□□□ 0.23
HCFC1-204ENST00000461098 CHRNA5P30532 468 aa16.48■□□□□ 0.23
HCFC1-204ENST00000461098 DALRD3Q5D0E6 543 aaKnown RBP16.48■□□□□ 0.23
HCFC1-204ENST00000461098 USP42Q9H9J4 1324 aaKnown RBP16.47■□□□□ 0.23
HCFC1-204ENST00000461098 CRKLP46109 303 aaKnown RBP16.47■□□□□ 0.23
HCFC1-204ENST00000461098 TJP1Q07157 1748 aa16.46■□□□□ 0.23
HCFC1-204ENST00000461098 TM4SF1P30408 202 aa16.46■□□□□ 0.23
HCFC1-204ENST00000461098 PRELPP51888 382 aa16.46■□□□□ 0.23
HCFC1-204ENST00000461098 POLRMTO00411 1230 aaKnown RBP16.45■□□□□ 0.22
HCFC1-204ENST00000461098 CAPN15O75808 1086 aa16.45■□□□□ 0.22
HCFC1-204ENST00000461098 HSP90AB1P08238 724 aaKnown RBP16.45■□□□□ 0.22
HCFC1-204ENST00000461098 PTCD1O75127 700 aaKnown RBP16.44■□□□□ 0.22
HCFC1-204ENST00000461098 INTS5Q6P9B9 1019 aaKnown RBP16.44■□□□□ 0.22
HCFC1-204ENST00000461098 TNS4Q8IZW8 715 aa16.44■□□□□ 0.22
HCFC1-204ENST00000461098 SMC1BQ8NDV3 1235 aa16.44■□□□□ 0.22
HCFC1-204ENST00000461098 CABP4P57796 275 aa16.43■□□□□ 0.22
HCFC1-204ENST00000461098 TNNT2P45379 298 aaPredicted RBP16.42■□□□□ 0.22
HCFC1-204ENST00000461098 RASSF7Q02833 373 aa16.42■□□□□ 0.22
HCFC1-204ENST00000461098 PLEKHO1Q53GL0 409 aaPredicted RBP16.42■□□□□ 0.22
HCFC1-204ENST00000461098 ZNF530Q6P9A1 599 aaPredicted RBP16.42■□□□□ 0.22
HCFC1-204ENST00000461098 NFATC2IPQ8NCF5 419 aa16.42■□□□□ 0.22
HCFC1-204ENST00000461098 AFDNP55196 1824 aaKnown RBP16.4■□□□□ 0.22
HCFC1-204ENST00000461098 NRXN2Q9P2S2 1712 aa16.4■□□□□ 0.22
HCFC1-204ENST00000461098 MTHFSP49914 203 aa16.4■□□□□ 0.22
HCFC1-204ENST00000461098 AMOTQ4VCS5 1084 aa16.4■□□□□ 0.22
HCFC1-204ENST00000461098 AEBP1Q8IUX7 1158 aa16.4■□□□□ 0.22
HCFC1-204ENST00000461098 ZC3H4Q9UPT8 1303 aaKnown RBP16.4■□□□□ 0.22
HCFC1-204ENST00000461098 DLEC1Q9Y238 1755 aa16.39■□□□□ 0.21
HCFC1-204ENST00000461098 GLTPD2A6NH11 291 aa16.39■□□□□ 0.21
HCFC1-204ENST00000461098 POTECB2RU33 542 aa16.39■□□□□ 0.21
HCFC1-204ENST00000461098 USPL1Q5W0Q7 1092 aa16.39■□□□□ 0.21
HCFC1-204ENST00000461098 HSPA1AP0DMV8 641 aaKnown RBP16.38■□□□□ 0.21
HCFC1-204ENST00000461098 HSPA1BP0DMV9 641 aaKnown RBP16.38■□□□□ 0.21
HCFC1-204ENST00000461098 SCN11AQ9UI33 1791 aa16.38■□□□□ 0.21
HCFC1-204ENST00000461098 VEGFAP15692 232 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms