RNA–Protein interactions for RNA: ENST00000460160.5

HOXB3-202, Transcript of homeobox B3, humanhuman

TSL 5 BASIC

Gene HOXB3, Length 1,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-202ENST00000460160 CFAP53Q96M91 514 aa31.86■■■□□ 2.69
HOXB3-202ENST00000460160 ZNF831Q5JPB2 1677 aa31.86■■■□□ 2.69
HOXB3-202ENST00000460160 ITPK1Q13572 414 aa31.85■■■□□ 2.69
HOXB3-202ENST00000460160 MTHFSDQ2M296 383 aaKnown RBP31.85■■■□□ 2.69
HOXB3-202ENST00000460160 LINC00116Q8NCU8 138 aa31.85■■■□□ 2.69
HOXB3-202ENST00000460160 ATP6V1AP38606 617 aa31.85■■■□□ 2.69
HOXB3-202ENST00000460160 NFATC2IPQ8NCF5 419 aa31.84■■■□□ 2.69
HOXB3-202ENST00000460160 AMIGO3Q86WK7 504 aa31.83■■■□□ 2.69
HOXB3-202ENST00000460160 AK7Q96M32 723 aa31.83■■■□□ 2.69
HOXB3-202ENST00000460160 SLC4A9Q96Q91 983 aa31.83■■■□□ 2.69
HOXB3-202ENST00000460160 ARXQ96QS3 562 aa31.83■■■□□ 2.69
HOXB3-202ENST00000460160 ADAMTS7Q9UKP4 1686 aa31.83■■■□□ 2.69
HOXB3-202ENST00000460160 MSH5O43196 834 aa31.82■■■□□ 2.68
HOXB3-202ENST00000460160 LGR6Q9HBX8 967 aa31.81■■■□□ 2.68
HOXB3-202ENST00000460160 MRC1P22897 1456 aa31.81■■■□□ 2.68
HOXB3-202ENST00000460160 FHDC1Q9C0D6 1143 aaPredicted RBP31.8■■■□□ 2.68
HOXB3-202ENST00000460160 FLAD1Q8NFF5 587 aa31.8■■■□□ 2.68
HOXB3-202ENST00000460160 RBM42Q9BTD8 480 aaKnown RBP31.8■■■□□ 2.68
HOXB3-202ENST00000460160 COL5A3P25940 1745 aaPredicted RBP31.79■■■□□ 2.68
HOXB3-202ENST00000460160 RNMTO43148 476 aaKnown RBP31.79■■■□□ 2.68
HOXB3-202ENST00000460160 SLC52A2Q9HAB3 445 aa31.78■■■□□ 2.68
HOXB3-202ENST00000460160 UTRNP46939 3433 aa31.77■■■□□ 2.68
HOXB3-202ENST00000460160 POLD1P28340 1107 aa31.77■■■□□ 2.68
HOXB3-202ENST00000460160 SMIM5Q71RC9 77 aa31.77■■■□□ 2.68
HOXB3-202ENST00000460160 SYT17Q9BSW7 474 aa31.76■■■□□ 2.68
HOXB3-202ENST00000460160 NUDCQ9Y266 331 aa31.76■■■□□ 2.68
HOXB3-202ENST00000460160 RSPH6AQ9H0K4 717 aa31.75■■■□□ 2.67
HOXB3-202ENST00000460160 PHF14O94880 888 aa31.75■■■□□ 2.67
HOXB3-202ENST00000460160 MAP3K5Q99683 1374 aa31.74■■■□□ 2.67
HOXB3-202ENST00000460160 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.74■■■□□ 2.67
HOXB3-202ENST00000460160 SSFA2P28290 1259 aa31.74■■■□□ 2.67
HOXB3-202ENST00000460160 MYH14Q7Z406 1995 aaKnown RBP31.74■■■□□ 2.67
HOXB3-202ENST00000460160 GOLGB1Q14789 3259 aaKnown RBP31.73■■■□□ 2.67
HOXB3-202ENST00000460160 GNPATO15228 680 aa31.73■■■□□ 2.67
HOXB3-202ENST00000460160 PTCD1O75127 700 aaKnown RBP31.73■■■□□ 2.67
HOXB3-202ENST00000460160 MSL1Q68DK7 614 aa31.73■■■□□ 2.67
HOXB3-202ENST00000460160 PRKAR2BP31323 418 aa31.72■■■□□ 2.67
HOXB3-202ENST00000460160 GAS2L2Q8NHY3 880 aa31.72■■■□□ 2.67
HOXB3-202ENST00000460160 U2AF1L5P0DN76 240 aaPredicted RBP31.71■■■□□ 2.67
HOXB3-202ENST00000460160 U2AF1Q01081 240 aaKnown RBP eCLIP31.71■■■□□ 2.674e-6■■■■□ 20.8
HOXB3-202ENST00000460160 PHACTR3Q96KR7 559 aa31.71■■■□□ 2.67
HOXB3-202ENST00000460160 CICQ96RK0 1608 aaPredicted RBP31.71■■■□□ 2.67
HOXB3-202ENST00000460160 TJP1Q07157 1748 aa31.71■■■□□ 2.67
HOXB3-202ENST00000460160 DDX10Q13206 875 aaKnown RBP31.7■■■□□ 2.66
HOXB3-202ENST00000460160 CNTNAP4Q9C0A0 1308 aa31.68■■■□□ 2.66
HOXB3-202ENST00000460160 GNAT3A8MTJ3 354 aa31.67■■■□□ 2.66
HOXB3-202ENST00000460160 RC3H1Q5TC82 1133 aaKnown RBP31.67■■■□□ 2.66
HOXB3-202ENST00000460160 SIPA1L3O60292 1781 aaPredicted RBP31.66■■■□□ 2.66
HOXB3-202ENST00000460160 FCHSD2O94868 740 aa31.65■■■□□ 2.66
HOXB3-202ENST00000460160 SLC39A6Q13433 755 aa31.65■■■□□ 2.66
HOXB3-202ENST00000460160 IL17REQ8NFR9 667 aa31.65■■■□□ 2.66
HOXB3-202ENST00000460160 KCPQ6ZWJ8 1503 aa31.64■■■□□ 2.66
HOXB3-202ENST00000460160 UBR2Q8IWV8 1755 aa31.64■■■□□ 2.66
HOXB3-202ENST00000460160 RTCBQ9Y3I0 505 aaKnown RBP31.64■■■□□ 2.66
HOXB3-202ENST00000460160 KLHL34Q8N239 644 aa31.63■■■□□ 2.65
HOXB3-202ENST00000460160 DCAF8L1A6NGE4 600 aa31.62■■■□□ 2.65
HOXB3-202ENST00000460160 CRKLP46109 303 aaKnown RBP31.6■■■□□ 2.65
HOXB3-202ENST00000460160 RALBP1Q15311 655 aa31.6■■■□□ 2.65
HOXB3-202ENST00000460160 CEMIPQ8WUJ3 1361 aa31.6■■■□□ 2.65
HOXB3-202ENST00000460160 RPS6KA4O75676 772 aa31.59■■■□□ 2.65
HOXB3-202ENST00000460160 TRAPPC3LQ5T215 181 aa31.59■■■□□ 2.65
HOXB3-202ENST00000460160 C4AP0C0L4 1744 aa31.59■■■□□ 2.65
HOXB3-202ENST00000460160 ADRA2BP18089 450 aa31.59■■■□□ 2.65
HOXB3-202ENST00000460160 TEFQ10587 303 aa31.58■■■□□ 2.65
HOXB3-202ENST00000460160 DNAJC10Q8IXB1 793 aa31.58■■■□□ 2.65
HOXB3-202ENST00000460160 ARHGEF1Q92888 912 aaKnown RBP31.57■■■□□ 2.64
HOXB3-202ENST00000460160 NLGN2Q8NFZ4 835 aa31.56■■■□□ 2.64
HOXB3-202ENST00000460160 INTS5Q6P9B9 1019 aaKnown RBP31.54■■■□□ 2.64
HOXB3-202ENST00000460160 ZEB1P37275 1124 aaPredicted RBP31.54■■■□□ 2.64
HOXB3-202ENST00000460160 VSIG10Q8N0Z9 540 aa31.53■■■□□ 2.64
HOXB3-202ENST00000460160 DLG5Q8TDM6 1919 aa31.52■■■□□ 2.64
HOXB3-202ENST00000460160 CYP19A1P11511 503 aaPredicted RBP31.52■■■□□ 2.64
HOXB3-202ENST00000460160 TTC5Q8N0Z6 440 aa31.52■■■□□ 2.64
HOXB3-202ENST00000460160 RFC4P35249 363 aa31.51■■■□□ 2.63
HOXB3-202ENST00000460160 ZNF790Q6PG37 636 aa31.51■■■□□ 2.63
HOXB3-202ENST00000460160 CCDC87Q9NVE4 849 aa31.51■■■□□ 2.63
HOXB3-202ENST00000460160 MCM10Q7L590 875 aa31.49■■■□□ 2.63
HOXB3-202ENST00000460160 ZNF496Q96IT1 587 aaPredicted RBP31.49■■■□□ 2.63
HOXB3-202ENST00000460160 PLEKHF1Q96S99 279 aa31.49■■■□□ 2.63
HOXB3-202ENST00000460160 CD2APQ9Y5K6 639 aa31.49■■■□□ 2.63
HOXB3-202ENST00000460160 GYS1P13807 737 aa31.49■■■□□ 2.63
HOXB3-202ENST00000460160 RTF1Q92541 710 aaKnown RBP31.49■■■□□ 2.63
HOXB3-202ENST00000460160 MYBBP1AQ9BQG0 1328 aaKnown RBP31.48■■■□□ 2.63
HOXB3-202ENST00000460160 MMP10P09238 476 aa31.48■■■□□ 2.63
HOXB3-202ENST00000460160 NLGN1Q8N2Q7 840 aa31.47■■■□□ 2.63
HOXB3-202ENST00000460160 HTATSF1O43719 755 aaKnown RBP31.46■■■□□ 2.63
HOXB3-202ENST00000460160 SOS1Q07889 1333 aaPredicted RBP31.46■■■□□ 2.63
HOXB3-202ENST00000460160 BTBD11A6QL63 1104 aa31.45■■■□□ 2.63
HOXB3-202ENST00000460160 DCTN1Q14203 1278 aa31.45■■■□□ 2.63
HOXB3-202ENST00000460160 HEG1Q9ULI3 1381 aa31.45■■■□□ 2.63
HOXB3-202ENST00000460160 CHD4Q14839 1912 aa31.45■■■□□ 2.62
HOXB3-202ENST00000460160 SRP68Q9UHB9 627 aaKnown RBP31.44■■■□□ 2.62
HOXB3-202ENST00000460160 ZBTB1Q9Y2K1 713 aa31.44■■■□□ 2.62
HOXB3-202ENST00000460160 USP42Q9H9J4 1324 aaKnown RBP31.44■■■□□ 2.62
HOXB3-202ENST00000460160 NEFMP07197 916 aa31.44■■■□□ 2.62
HOXB3-202ENST00000460160 GPR162Q16538 588 aa31.44■■■□□ 2.62
HOXB3-202ENST00000460160 KCNQ3O43525 872 aa31.43■■■□□ 2.62
HOXB3-202ENST00000460160 YY1P25490 414 aa31.43■■■□□ 2.62
HOXB3-202ENST00000460160 FMNL2Q96PY5 1086 aa31.42■■■□□ 2.62
HOXB3-202ENST00000460160 KIF13BQ9NQT8 1826 aa31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms