RNA–Protein interactions for RNA: ENST00000459584.1

SNORD42A-201, Transcript of small nucleolar RNA, C/D box 42A, humanhuman

BASIC

Gene SNORD42A, Length 64 nt, Biotype snoRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42A-201ENST00000459584 RFX1P22670 979 aa7.56□□□□□ -1.2
SNORD42A-201ENST00000459584 LCE2AQ5TA79 106 aaPredicted RBP7.56□□□□□ -1.2
SNORD42A-201ENST00000459584 TMEM214Q6NUQ4 689 aaKnown RBP7.56□□□□□ -1.2
SNORD42A-201ENST00000459584 NBPF10Q6P3W6 841 aaKnown RBP7.56□□□□□ -1.2
SNORD42A-201ENST00000459584 OGFOD1Q8N543 542 aa7.56□□□□□ -1.2
SNORD42A-201ENST00000459584 NBPF15Q8N660 670 aa7.56□□□□□ -1.2
SNORD42A-201ENST00000459584 SLC16A10Q8TF71 515 aa7.56□□□□□ -1.2
SNORD42A-201ENST00000459584 ERBB4Q15303 1308 aa7.55□□□□□ -1.2
SNORD42A-201ENST00000459584 CDCA8Q53HL2 280 aa7.55□□□□□ -1.2
SNORD42A-201ENST00000459584 CFAP70Q5T0N1 1121 aa7.55□□□□□ -1.2
SNORD42A-201ENST00000459584 TRIM50Q86XT4 487 aa7.55□□□□□ -1.2
SNORD42A-201ENST00000459584 NPAS3Q8IXF0 933 aa7.55□□□□□ -1.2
SNORD42A-201ENST00000459584 TPCN2Q8NHX9 752 aa7.55□□□□□ -1.2
SNORD42A-201ENST00000459584 ZNF594Q96JF6 807 aaPredicted RBP7.55□□□□□ -1.2
SNORD42A-201ENST00000459584 DNAAF2Q9NVR5 837 aaKnown RBP7.55□□□□□ -1.2
SNORD42A-201ENST00000459584 ZNF358Q9NW07 568 aa7.55□□□□□ -1.2
SNORD42A-201ENST00000459584 SPATA31C2B4DYI2 1134 aa7.54□□□□□ -1.2
SNORD42A-201ENST00000459584 RASA1P20936 1047 aa7.54□□□□□ -1.2
SNORD42A-201ENST00000459584 SMTNP53814 917 aa7.54□□□□□ -1.2
SNORD42A-201ENST00000459584 CCDC102BQ68D86 513 aa7.54□□□□□ -1.2
SNORD42A-201ENST00000459584 TAS1R3Q7RTX0 852 aa7.54□□□□□ -1.2
SNORD42A-201ENST00000459584 GAS2L1Q99501 681 aaPredicted RBP7.54□□□□□ -1.2
SNORD42A-201ENST00000459584 WASLO00401 505 aaPredicted RBP7.53□□□□□ -1.2
SNORD42A-201ENST00000459584 GTF2E1P29083 439 aaPredicted RBP7.53□□□□□ -1.2
SNORD42A-201ENST00000459584 ATP1A2P50993 1020 aa7.53□□□□□ -1.2
SNORD42A-201ENST00000459584 C4orf17Q53FE4 359 aa7.53□□□□□ -1.2
SNORD42A-201ENST00000459584 KANK4Q5T7N3 995 aaPredicted RBP7.53□□□□□ -1.2
SNORD42A-201ENST00000459584 TIMMDC1Q9NPL8 285 aa7.53□□□□□ -1.2
SNORD42A-201ENST00000459584 CUEDC1Q9NWM3 386 aaPredicted RBP7.53□□□□□ -1.2
SNORD42A-201ENST00000459584 A6NJY4 79 aa7.52□□□□□ -1.21
SNORD42A-201ENST00000459584 SFI1A8K8P3 1242 aa7.52□□□□□ -1.21
SNORD42A-201ENST00000459584 ITGA6P23229 1130 aa7.52□□□□□ -1.21
SNORD42A-201ENST00000459584 RIPOR1Q6ZS17 1223 aa7.52□□□□□ -1.21
SNORD42A-201ENST00000459584 PPARGC1BQ86YN6 1023 aaKnown RBP7.52□□□□□ -1.21
SNORD42A-201ENST00000459584 TNS4Q8IZW8 715 aa7.52□□□□□ -1.21
SNORD42A-201ENST00000459584 VWA5B2Q8N398 1253 aa7.52□□□□□ -1.21
SNORD42A-201ENST00000459584 IRF7Q92985 503 aa7.52□□□□□ -1.21
SNORD42A-201ENST00000459584 SLC4A9Q96Q91 983 aa7.52□□□□□ -1.21
SNORD42A-201ENST00000459584 VRTNQ9H8Y1 702 aa7.52□□□□□ -1.21
SNORD42A-201ENST00000459584 USP3Q9Y6I4 520 aa7.52□□□□□ -1.21
SNORD42A-201ENST00000459584 CDC14CA4D256 554 aa7.51□□□□□ -1.21
SNORD42A-201ENST00000459584 GMPRP36959 345 aa7.51□□□□□ -1.21
SNORD42A-201ENST00000459584 CRTC2Q53ET0 693 aaPredicted RBP7.51□□□□□ -1.21
SNORD42A-201ENST00000459584 GNASQ5JWF2 1037 aa7.51□□□□□ -1.21
SNORD42A-201ENST00000459584 TBCELQ5QJ74 424 aa7.51□□□□□ -1.21
SNORD42A-201ENST00000459584 LARGE2Q8N3Y3 721 aa7.51□□□□□ -1.21
SNORD42A-201ENST00000459584 GPR161Q8N6U8 529 aaKnown RBP7.51□□□□□ -1.21
SNORD42A-201ENST00000459584 RHBDD1Q8TEB9 315 aa7.51□□□□□ -1.21
SNORD42A-201ENST00000459584 BACH1O14867 736 aa7.5□□□□□ -1.21
SNORD42A-201ENST00000459584 DKK1O94907 266 aa7.5□□□□□ -1.21
SNORD42A-201ENST00000459584 LARP1Q6PKG0 1096 aaKnown RBP7.5□□□□□ -1.21
SNORD42A-201ENST00000459584 DYRK1BQ9Y463 629 aa7.5□□□□□ -1.21
SNORD42A-201ENST00000459584 LGR5O75473 907 aa7.49□□□□□ -1.21
SNORD42A-201ENST00000459584 PLA2G4AP47712 749 aa7.49□□□□□ -1.21
SNORD42A-201ENST00000459584 PTK7Q13308 1070 aa7.49□□□□□ -1.21
SNORD42A-201ENST00000459584 MTFR1Q15390 333 aa7.49□□□□□ -1.21
SNORD42A-201ENST00000459584 WDR44Q5JSH3 913 aa7.49□□□□□ -1.21
SNORD42A-201ENST00000459584 SIX5Q8N196 739 aa7.49□□□□□ -1.21
SNORD42A-201ENST00000459584 TSEN2Q8NCE0 465 aaKnown RBP7.49□□□□□ -1.21
SNORD42A-201ENST00000459584 C1orf115Q9H7X2 142 aa7.49□□□□□ -1.21
SNORD42A-201ENST00000459584 GPAMQ9HCL2 828 aa7.49□□□□□ -1.21
SNORD42A-201ENST00000459584 IQSEC3Q9UPP2 1182 aaPredicted RBP7.49□□□□□ -1.21
SNORD42A-201ENST00000459584 PARP3Q9Y6F1 533 aa7.49□□□□□ -1.21
SNORD42A-201ENST00000459584 USP17L15C9J2P7 530 aa7.48□□□□□ -1.21
SNORD42A-201ENST00000459584 USP17L10C9JJH3 530 aa7.48□□□□□ -1.21
SNORD42A-201ENST00000459584 USP17L13C9JLJ4 530 aa7.48□□□□□ -1.21
SNORD42A-201ENST00000459584 USP17L12C9JPN9 530 aa7.48□□□□□ -1.21
SNORD42A-201ENST00000459584 USP17L11C9JVI0 530 aa7.48□□□□□ -1.21
SNORD42A-201ENST00000459584 USP17L21D6R901 530 aa7.48□□□□□ -1.21
SNORD42A-201ENST00000459584 USP17L18D6R9N7 530 aa7.48□□□□□ -1.21
SNORD42A-201ENST00000459584 USP17L22D6RA61 530 aa7.48□□□□□ -1.21
SNORD42A-201ENST00000459584 USP17L17D6RBQ6 530 aa7.48□□□□□ -1.21
SNORD42A-201ENST00000459584 USP17L19D6RCP7 530 aa7.48□□□□□ -1.21
SNORD42A-201ENST00000459584 USP17L20D6RJB6 530 aa7.48□□□□□ -1.21
SNORD42A-201ENST00000459584 CDK2AP1O14519 115 aa7.48□□□□□ -1.21
SNORD42A-201ENST00000459584 VSIG8P0DPA2 414 aa7.48□□□□□ -1.21
SNORD42A-201ENST00000459584 EPHA4P54764 986 aa7.48□□□□□ -1.21
SNORD42A-201ENST00000459584 USP17L24Q0WX57 530 aa7.48□□□□□ -1.21
SNORD42A-201ENST00000459584 DPYDQ12882 1025 aa7.48□□□□□ -1.21
SNORD42A-201ENST00000459584 DBN1Q16643 649 aa7.48□□□□□ -1.21
SNORD42A-201ENST00000459584 AIDAQ96BJ3 306 aa7.48□□□□□ -1.21
SNORD42A-201ENST00000459584 CCDC97Q96F63 343 aaPredicted RBP7.48□□□□□ -1.21
SNORD42A-201ENST00000459584 CABP1Q9NZU7 370 aa7.48□□□□□ -1.21
SNORD42A-201ENST00000459584 SCHIP1Q9P0W5 487 aaPredicted RBP7.48□□□□□ -1.21
SNORD42A-201ENST00000459584 TIMELESSQ9UNS1 1208 aa7.48□□□□□ -1.21
SNORD42A-201ENST00000459584 RBM19Q9Y4C8 960 aaKnown RBP7.48□□□□□ -1.21
SNORD42A-201ENST00000459584 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.47□□□□□ -1.21
SNORD42A-201ENST00000459584 F11P03951 625 aa7.47□□□□□ -1.21
SNORD42A-201ENST00000459584 SV2AQ7L0J3 742 aa7.47□□□□□ -1.21
SNORD42A-201ENST00000459584 ZNF295-AS1Q8N0V1 137 aa7.47□□□□□ -1.21
SNORD42A-201ENST00000459584 NANOS1Q8WY41 292 aaKnown RBP7.47□□□□□ -1.21
SNORD42A-201ENST00000459584 NIFKQ9BYG3 293 aaKnown RBP7.47□□□□□ -1.21
SNORD42A-201ENST00000459584 FAM196BA6NMK8 535 aa7.46□□□□□ -1.22
SNORD42A-201ENST00000459584 MSX1P28360 303 aa7.46□□□□□ -1.22
SNORD42A-201ENST00000459584 SEC13P55735 322 aa7.46□□□□□ -1.22
SNORD42A-201ENST00000459584 ANKMY2Q8IV38 441 aa7.46□□□□□ -1.22
SNORD42A-201ENST00000459584 SLC9A9Q8IVB4 645 aa7.46□□□□□ -1.22
SNORD42A-201ENST00000459584 CCDC82Q8N4S0 544 aa7.46□□□□□ -1.22
SNORD42A-201ENST00000459584 GAS2L2Q8NHY3 880 aa7.46□□□□□ -1.22
SNORD42A-201ENST00000459584 ZNF837Q96EG3 531 aaPredicted RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms