RNA–Protein interactions for RNA: ENST00000457753.5

UBA1-208, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 5

Gene UBA1, Length 809 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-208ENST00000457753 ITPK1Q13572 414 aa23.43■■□□□ 1.34
UBA1-208ENST00000457753 RBM42Q9BTD8 480 aaKnown RBP23.42■■□□□ 1.34
UBA1-208ENST00000457753 ATG3Q9NT62 314 aa23.42■■□□□ 1.34
UBA1-208ENST00000457753 IGSF1Q8N6C5 1336 aa23.41■■□□□ 1.34
UBA1-208ENST00000457753 PANK3Q9H999 370 aa23.41■■□□□ 1.34
UBA1-208ENST00000457753 ZNF526Q8TF50 670 aaPredicted RBP23.4■■□□□ 1.34
UBA1-208ENST00000457753 ATP10DQ9P241 1426 aa23.4■■□□□ 1.34
UBA1-208ENST00000457753 PLEKHO1Q53GL0 409 aaPredicted RBP23.37■■□□□ 1.33
UBA1-208ENST00000457753 GPBP1L1Q9HC44 474 aaPredicted RBP23.37■■□□□ 1.33
UBA1-208ENST00000457753 MMP10P09238 476 aa23.36■■□□□ 1.33
UBA1-208ENST00000457753 ZNF530Q6P9A1 599 aaPredicted RBP23.36■■□□□ 1.33
UBA1-208ENST00000457753 MORC1Q86VD1 984 aa23.36■■□□□ 1.33
UBA1-208ENST00000457753 RTCBQ9Y3I0 505 aaKnown RBP23.36■■□□□ 1.33
UBA1-208ENST00000457753 HSP90AB1P08238 724 aaKnown RBP23.35■■□□□ 1.33
UBA1-208ENST00000457753 CABP4P57796 275 aa23.35■■□□□ 1.33
UBA1-208ENST00000457753 TRAPPC3LQ5T215 181 aa23.35■■□□□ 1.33
UBA1-208ENST00000457753 DCAF5Q96JK2 942 aa23.35■■□□□ 1.33
UBA1-208ENST00000457753 ERVV-2B6SEH9 535 aa23.34■■□□□ 1.33
UBA1-208ENST00000457753 C1orf141Q5JVX7 400 aa23.32■■□□□ 1.32
UBA1-208ENST00000457753 KIF7Q2M1P5 1343 aa23.32■■□□□ 1.32
UBA1-208ENST00000457753 MTHFSP49914 203 aa23.31■■□□□ 1.32
UBA1-208ENST00000457753 AEBP1Q8IUX7 1158 aa23.31■■□□□ 1.32
UBA1-208ENST00000457753 SLC4A9Q96Q91 983 aa23.31■■□□□ 1.32
UBA1-208ENST00000457753 PTCD1O75127 700 aaKnown RBP23.3■■□□□ 1.32
UBA1-208ENST00000457753 RFC4P35249 363 aa23.3■■□□□ 1.32
UBA1-208ENST00000457753 AMOTQ4VCS5 1084 aa23.3■■□□□ 1.32
UBA1-208ENST00000457753 KDRP35968 1356 aa23.29■■□□□ 1.32
UBA1-208ENST00000457753 NLGN1Q8N2Q7 840 aa23.29■■□□□ 1.32
UBA1-208ENST00000457753 ARHGEF1Q92888 912 aaKnown RBP23.29■■□□□ 1.32
UBA1-208ENST00000457753 SULT6B1Q6IMI4 303 aa23.28■■□□□ 1.32
UBA1-208ENST00000457753 KNSTRNQ9Y448 316 aa23.28■■□□□ 1.32
UBA1-208ENST00000457753 KDM6AO15550 1401 aaPredicted RBP23.27■■□□□ 1.32
UBA1-208ENST00000457753 CICQ96RK0 1608 aaPredicted RBP23.27■■□□□ 1.32
UBA1-208ENST00000457753 A0A0G2JLW4 131 aa23.27■■□□□ 1.32
UBA1-208ENST00000457753 PLEKHG2Q9H7P9 1386 aa23.27■■□□□ 1.31
UBA1-208ENST00000457753 RC3H1Q5TC82 1133 aaKnown RBP23.26■■□□□ 1.31
UBA1-208ENST00000457753 NFATC2IPQ8NCF5 419 aa23.26■■□□□ 1.31
UBA1-208ENST00000457753 BCS1LQ9Y276 419 aa23.26■■□□□ 1.31
UBA1-208ENST00000457753 RPS6KA4O75676 772 aa23.25■■□□□ 1.31
UBA1-208ENST00000457753 ADRA2BP18089 450 aa23.25■■□□□ 1.31
UBA1-208ENST00000457753 PARP3Q9Y6F1 533 aa23.25■■□□□ 1.31
UBA1-208ENST00000457753 CNTNAP4Q9C0A0 1308 aa23.25■■□□□ 1.31
UBA1-208ENST00000457753 ADCY9O60503 1353 aa23.25■■□□□ 1.31
UBA1-208ENST00000457753 N4BP2Q86UW6 1770 aaPredicted RBP23.24■■□□□ 1.31
UBA1-208ENST00000457753 CCDC87Q9NVE4 849 aa23.24■■□□□ 1.31
UBA1-208ENST00000457753 CEP350Q5VT06 3117 aa23.24■■□□□ 1.31
UBA1-208ENST00000457753 PXDNLA1KZ92 1463 aa23.24■■□□□ 1.31
UBA1-208ENST00000457753 COL5A3P25940 1745 aaPredicted RBP23.23■■□□□ 1.31
UBA1-208ENST00000457753 GYS1P13807 737 aa23.23■■□□□ 1.31
UBA1-208ENST00000457753 TGFB2P61812 414 aa23.23■■□□□ 1.31
UBA1-208ENST00000457753 ZNF831Q5JPB2 1677 aa23.22■■□□□ 1.31
UBA1-208ENST00000457753 ARHGAP27Q6ZUM4 889 aa23.21■■□□□ 1.31
UBA1-208ENST00000457753 DPEP1P16444 411 aa23.2■■□□□ 1.3
UBA1-208ENST00000457753 CRKLP46109 303 aaKnown RBP23.2■■□□□ 1.3
UBA1-208ENST00000457753 SRP68Q9UHB9 627 aaKnown RBP23.2■■□□□ 1.3
UBA1-208ENST00000457753 C4AP0C0L4 1744 aa23.19■■□□□ 1.3
UBA1-208ENST00000457753 FCHSD2O94868 740 aa23.19■■□□□ 1.3
UBA1-208ENST00000457753 IL13P35225 146 aa23.19■■□□□ 1.3
UBA1-208ENST00000457753 AMER1Q5JTC6 1135 aaPredicted RBP23.19■■□□□ 1.3
UBA1-208ENST00000457753 C10orf71Q711Q0 1435 aa23.18■■□□□ 1.3
UBA1-208ENST00000457753 KIF13BQ9NQT8 1826 aa23.18■■□□□ 1.3
UBA1-208ENST00000457753 MYH14Q7Z406 1995 aaKnown RBP23.18■■□□□ 1.3
UBA1-208ENST00000457753 KIAA1551Q9HCM1 1747 aa23.16■■□□□ 1.3
UBA1-208ENST00000457753 PER1O15534 1290 aaPredicted RBP23.16■■□□□ 1.3
UBA1-208ENST00000457753 HMOX1P09601 288 aa23.16■■□□□ 1.3
UBA1-208ENST00000457753 HSPA6P17066 643 aa23.16■■□□□ 1.3
UBA1-208ENST00000457753 CNGB1Q14028 1251 aaPredicted RBP23.15■■□□□ 1.3
UBA1-208ENST00000457753 FKBP8Q14318 412 aa23.15■■□□□ 1.3
UBA1-208ENST00000457753 AKAP4Q5JQC9 854 aa23.15■■□□□ 1.3
UBA1-208ENST00000457753 LGR6Q9HBX8 967 aa23.14■■□□□ 1.29
UBA1-208ENST00000457753 USP42Q9H9J4 1324 aaKnown RBP23.13■■□□□ 1.29
UBA1-208ENST00000457753 KIF3CO14782 793 aa23.13■■□□□ 1.29
UBA1-208ENST00000457753 ZEB1P37275 1124 aaPredicted RBP23.13■■□□□ 1.29
UBA1-208ENST00000457753 DNAJC10Q8IXB1 793 aa23.13■■□□□ 1.29
UBA1-208ENST00000457753 SCN11AQ9UI33 1791 aa23.13■■□□□ 1.29
UBA1-208ENST00000457753 TJP1Q07157 1748 aa23.13■■□□□ 1.29
UBA1-208ENST00000457753 ZPR1O75312 459 aa23.12■■□□□ 1.29
UBA1-208ENST00000457753 SLC39A6Q13433 755 aa23.12■■□□□ 1.29
UBA1-208ENST00000457753 SLC52A2Q9HAB3 445 aa23.12■■□□□ 1.29
UBA1-208ENST00000457753 CC2D1BQ5T0F9 858 aaKnown RBP23.11■■□□□ 1.29
UBA1-208ENST00000457753 INTS5Q6P9B9 1019 aaKnown RBP23.11■■□□□ 1.29
UBA1-208ENST00000457753 PIM2Q9P1W9 311 aa23.11■■□□□ 1.29
UBA1-208ENST00000457753 NPC1L1Q9UHC9 1359 aa23.11■■□□□ 1.29
UBA1-208ENST00000457753 DDR1Q08345 913 aa23.1■■□□□ 1.29
UBA1-208ENST00000457753 KCNA3P22001 575 aa23.09■■□□□ 1.29
UBA1-208ENST00000457753 USPL1Q5W0Q7 1092 aa23.09■■□□□ 1.29
UBA1-208ENST00000457753 RNMTO43148 476 aaKnown RBP23.08■■□□□ 1.29
UBA1-208ENST00000457753 CHRNA5P30532 468 aa23.08■■□□□ 1.29
UBA1-208ENST00000457753 DALRD3Q5D0E6 543 aaKnown RBP23.08■■□□□ 1.29
UBA1-208ENST00000457753 DIAPH1O60610 1272 aaKnown RBP23.07■■□□□ 1.28
UBA1-208ENST00000457753 C9orf131Q5VYM1 1079 aa23.07■■□□□ 1.28
UBA1-208ENST00000457753 MTHFSDQ2M296 383 aaKnown RBP23.06■■□□□ 1.28
UBA1-208ENST00000457753 NMRK2Q9NPI5 230 aa23.06■■□□□ 1.28
UBA1-208ENST00000457753 BRCA1P38398 1863 aaKnown RBP23.06■■□□□ 1.28
UBA1-208ENST00000457753 POLRMTO00411 1230 aaKnown RBP23.05■■□□□ 1.28
UBA1-208ENST00000457753 CYP19A1P11511 503 aaPredicted RBP23.05■■□□□ 1.28
UBA1-208ENST00000457753 SOS1Q07889 1333 aaPredicted RBP23.04■■□□□ 1.28
UBA1-208ENST00000457753 VIRMAQ69YN4 1812 aaKnown RBP23.03■■□□□ 1.28
UBA1-208ENST00000457753 U2SURPO15042 1029 aaKnown RBP23.03■■□□□ 1.28
UBA1-208ENST00000457753 TOMM70O94826 608 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms