RNA–Protein interactions for RNA: ENST00000456991.5

TMEM56-203, Transcript of transmembrane protein 56, humanhuman

TSL 3

Gene TMEM56, Length 992 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-203ENST00000456991 HSP90AB1P08238 724 aaKnown RBP29.51■■■□□ 2.31
TMEM56-203ENST00000456991 WWC3Q9ULE0 1092 aa29.5■■■□□ 2.31
TMEM56-203ENST00000456991 PLEKHO1Q53GL0 409 aaPredicted RBP29.49■■■□□ 2.31
TMEM56-203ENST00000456991 TRAPPC3LQ5T215 181 aa29.49■■■□□ 2.31
TMEM56-203ENST00000456991 DCAF5Q96JK2 942 aa29.49■■■□□ 2.31
TMEM56-203ENST00000456991 RTCBQ9Y3I0 505 aaKnown RBP29.49■■■□□ 2.31
TMEM56-203ENST00000456991 MMP10P09238 476 aa29.48■■■□□ 2.31
TMEM56-203ENST00000456991 RBM42Q9BTD8 480 aaKnown RBP29.47■■■□□ 2.31
TMEM56-203ENST00000456991 PANK3Q9H999 370 aa29.47■■■□□ 2.31
TMEM56-203ENST00000456991 MAP2P11137 1827 aaKnown RBP29.47■■■□□ 2.31
TMEM56-203ENST00000456991 CEP350Q5VT06 3117 aa29.47■■■□□ 2.31
TMEM56-203ENST00000456991 UBR3Q6ZT12 1888 aa29.46■■■□□ 2.31
TMEM56-203ENST00000456991 NLGN1Q8N2Q7 840 aa29.46■■■□□ 2.31
TMEM56-203ENST00000456991 PCGF6Q9BYE7 350 aa29.46■■■□□ 2.31
TMEM56-203ENST00000456991 ADCY9O60503 1353 aa29.46■■■□□ 2.31
TMEM56-203ENST00000456991 EIF4G2P78344 907 aaKnown RBP eCLIP29.45■■■□□ 2.31
TMEM56-203ENST00000456991 AMOTQ4VCS5 1084 aa29.45■■■□□ 2.31
TMEM56-203ENST00000456991 RC3H1Q5TC82 1133 aaKnown RBP29.45■■■□□ 2.31
TMEM56-203ENST00000456991 ZNF526Q8TF50 670 aaPredicted RBP29.45■■■□□ 2.31
TMEM56-203ENST00000456991 SLC4A9Q96Q91 983 aa29.44■■■□□ 2.3
TMEM56-203ENST00000456991 ADRA2BP18089 450 aa29.43■■■□□ 2.3
TMEM56-203ENST00000456991 KDRP35968 1356 aa29.42■■■□□ 2.3
TMEM56-203ENST00000456991 CABP4P57796 275 aa29.42■■■□□ 2.3
TMEM56-203ENST00000456991 ZNF530Q6P9A1 599 aaPredicted RBP29.42■■■□□ 2.3
TMEM56-203ENST00000456991 TGFB2P61812 414 aa29.41■■■□□ 2.3
TMEM56-203ENST00000456991 ARHGEF1Q92888 912 aaKnown RBP29.41■■■□□ 2.3
TMEM56-203ENST00000456991 HSPA5P11021 654 aaKnown RBP29.4■■■□□ 2.3
TMEM56-203ENST00000456991 RPS6KA4O75676 772 aa29.39■■■□□ 2.3
TMEM56-203ENST00000456991 RFC4P35249 363 aa29.39■■■□□ 2.3
TMEM56-203ENST00000456991 MTHFSP49914 203 aa29.39■■■□□ 2.3
TMEM56-203ENST00000456991 MORC1Q86VD1 984 aa29.39■■■□□ 2.3
TMEM56-203ENST00000456991 CNTNAP4Q9C0A0 1308 aa29.39■■■□□ 2.3
TMEM56-203ENST00000456991 C1orf141Q5JVX7 400 aa29.37■■■□□ 2.29
TMEM56-203ENST00000456991 A0A0G2JLW4 131 aa29.35■■■□□ 2.29
TMEM56-203ENST00000456991 GYS1P13807 737 aa29.35■■■□□ 2.29
TMEM56-203ENST00000456991 CCDC87Q9NVE4 849 aa29.35■■■□□ 2.29
TMEM56-203ENST00000456991 HSPA6P17066 643 aa29.34■■■□□ 2.29
TMEM56-203ENST00000456991 AEBP1Q8IUX7 1158 aa29.34■■■□□ 2.29
TMEM56-203ENST00000456991 BCS1LQ9Y276 419 aa29.34■■■□□ 2.29
TMEM56-203ENST00000456991 PARP3Q9Y6F1 533 aa29.34■■■□□ 2.29
TMEM56-203ENST00000456991 KDM6AO15550 1401 aaPredicted RBP29.34■■■□□ 2.29
TMEM56-203ENST00000456991 PTCD1O75127 700 aaKnown RBP29.33■■■□□ 2.29
TMEM56-203ENST00000456991 PXDNLA1KZ92 1463 aa29.33■■■□□ 2.29
TMEM56-203ENST00000456991 SULT6B1Q6IMI4 303 aa29.32■■■□□ 2.28
TMEM56-203ENST00000456991 NFATC2IPQ8NCF5 419 aa29.32■■■□□ 2.28
TMEM56-203ENST00000456991 KNSTRNQ9Y448 316 aa29.31■■■□□ 2.28
TMEM56-203ENST00000456991 C10orf71Q711Q0 1435 aa29.29■■■□□ 2.28
TMEM56-203ENST00000456991 DPEP1P16444 411 aa29.29■■■□□ 2.28
TMEM56-203ENST00000456991 ARHGAP27Q6ZUM4 889 aa29.29■■■□□ 2.28
TMEM56-203ENST00000456991 KIF3CO14782 793 aa29.28■■■□□ 2.28
TMEM56-203ENST00000456991 CRKLP46109 303 aaKnown RBP29.28■■■□□ 2.28
TMEM56-203ENST00000456991 CICQ96RK0 1608 aaPredicted RBP29.27■■■□□ 2.28
TMEM56-203ENST00000456991 FCHSD2O94868 740 aa29.27■■■□□ 2.28
TMEM56-203ENST00000456991 IL13P35225 146 aa29.27■■■□□ 2.28
TMEM56-203ENST00000456991 ZNF831Q5JPB2 1677 aa29.27■■■□□ 2.28
TMEM56-203ENST00000456991 AKAP4Q5JQC9 854 aa29.22■■■□□ 2.27
TMEM56-203ENST00000456991 IFFO2Q5TF58 517 aa29.22■■■□□ 2.27
TMEM56-203ENST00000456991 SRP68Q9UHB9 627 aaKnown RBP29.22■■■□□ 2.27
TMEM56-203ENST00000456991 USP42Q9H9J4 1324 aaKnown RBP29.21■■■□□ 2.27
TMEM56-203ENST00000456991 KCNA3P22001 575 aa29.21■■■□□ 2.27
TMEM56-203ENST00000456991 FKBP8Q14318 412 aa29.21■■■□□ 2.27
TMEM56-203ENST00000456991 PIM2Q9P1W9 311 aa29.21■■■□□ 2.27
TMEM56-203ENST00000456991 INTS5Q6P9B9 1019 aaKnown RBP29.19■■■□□ 2.26
TMEM56-203ENST00000456991 KIF13BQ9NQT8 1826 aa29.19■■■□□ 2.26
TMEM56-203ENST00000456991 C4AP0C0L4 1744 aa29.18■■■□□ 2.26
TMEM56-203ENST00000456991 AMER1Q5JTC6 1135 aaPredicted RBP29.18■■■□□ 2.26
TMEM56-203ENST00000456991 SLC52A2Q9HAB3 445 aa29.18■■■□□ 2.26
TMEM56-203ENST00000456991 COL5A3P25940 1745 aaPredicted RBP29.17■■■□□ 2.26
TMEM56-203ENST00000456991 TOMM70O94826 608 aa29.17■■■□□ 2.26
TMEM56-203ENST00000456991 DALRD3Q5D0E6 543 aaKnown RBP29.17■■■□□ 2.26
TMEM56-203ENST00000456991 CCER1Q8TC90 406 aaPredicted RBP29.17■■■□□ 2.26
TMEM56-203ENST00000456991 DDR1Q08345 913 aa29.16■■■□□ 2.26
TMEM56-203ENST00000456991 LGR6Q9HBX8 967 aa29.16■■■□□ 2.26
TMEM56-203ENST00000456991 ZPR1O75312 459 aa29.15■■■□□ 2.26
TMEM56-203ENST00000456991 DNAJC10Q8IXB1 793 aa29.15■■■□□ 2.26
TMEM56-203ENST00000456991 KIAA1551Q9HCM1 1747 aa29.14■■■□□ 2.26
TMEM56-203ENST00000456991 TM4SF1P30408 202 aa29.14■■■□□ 2.26
TMEM56-203ENST00000456991 C9orf131Q5VYM1 1079 aa29.14■■■□□ 2.26
TMEM56-203ENST00000456991 N4BP2Q86UW6 1770 aaPredicted RBP29.13■■■□□ 2.25
TMEM56-203ENST00000456991 APLP1P51693 650 aa29.13■■■□□ 2.25
TMEM56-203ENST00000456991 MYH14Q7Z406 1995 aaKnown RBP29.12■■■□□ 2.25
TMEM56-203ENST00000456991 RNMTO43148 476 aaKnown RBP29.12■■■□□ 2.25
TMEM56-203ENST00000456991 NMRK2Q9NPI5 230 aa29.12■■■□□ 2.25
TMEM56-203ENST00000456991 POLRMTO00411 1230 aaKnown RBP29.11■■■□□ 2.25
TMEM56-203ENST00000456991 HMOX1P09601 288 aa29.11■■■□□ 2.25
TMEM56-203ENST00000456991 USPL1Q5W0Q7 1092 aa29.11■■■□□ 2.25
TMEM56-203ENST00000456991 CYP19A1P11511 503 aaPredicted RBP29.1■■■□□ 2.25
TMEM56-203ENST00000456991 SLC39A6Q13433 755 aa29.1■■■□□ 2.25
TMEM56-203ENST00000456991 SOS1Q07889 1333 aaPredicted RBP29.1■■■□□ 2.25
TMEM56-203ENST00000456991 CHRNA5P30532 468 aa29.09■■■□□ 2.25
TMEM56-203ENST00000456991 MTHFSDQ2M296 383 aaKnown RBP29.07■■■□□ 2.24
TMEM56-203ENST00000456991 KIF7Q2M1P5 1343 aa29.06■■■□□ 2.24
TMEM56-203ENST00000456991 DIAPH1O60610 1272 aaKnown RBP29.06■■■□□ 2.24
TMEM56-203ENST00000456991 C16orf71Q8IYS4 520 aaPredicted RBP29.06■■■□□ 2.24
TMEM56-203ENST00000456991 NARFQ9UHQ1 456 aa29.06■■■□□ 2.24
TMEM56-203ENST00000456991 VSIG10Q8N0Z9 540 aa29.05■■■□□ 2.24
TMEM56-203ENST00000456991 RNF181Q9P0P0 153 aa29.05■■■□□ 2.24
TMEM56-203ENST00000456991 KDM2BQ8NHM5 1336 aa29.04■■■□□ 2.24
TMEM56-203ENST00000456991 NFIXQ14938 502 aa29.04■■■□□ 2.24
TMEM56-203ENST00000456991 RBM46Q8TBY0 533 aaKnown RBP29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms