RNA–Protein interactions for RNA: ENST00000456459.1

PCDH9-AS4-201, PCDH9 antisense RNA 4, humanhuman

TSL 3 BASIC

Gene PCDH9-AS4, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-AS4-201ENST00000456459 SVOPQ8N4V2 548 aa10.18□□□□□ -0.78
PCDH9-AS4-201ENST00000456459 THBS1P07996 1170 aa10.17□□□□□ -0.78
PCDH9-AS4-201ENST00000456459 UBTFP17480 764 aaKnown RBP10.17□□□□□ -0.78
PCDH9-AS4-201ENST00000456459 GDF10P55107 478 aa10.17□□□□□ -0.78
PCDH9-AS4-201ENST00000456459 SRSF11Q05519 484 aaKnown RBP10.17□□□□□ -0.78
PCDH9-AS4-201ENST00000456459 TLR1Q15399 786 aa10.17□□□□□ -0.78
PCDH9-AS4-201ENST00000456459 FOXR1Q6PIV2 292 aa10.17□□□□□ -0.78
PCDH9-AS4-201ENST00000456459 WWC1Q8IX03 1113 aa10.17□□□□□ -0.78
PCDH9-AS4-201ENST00000456459 GPAMQ9HCL2 828 aa10.17□□□□□ -0.78
PCDH9-AS4-201ENST00000456459 INHAP05111 366 aa10.16□□□□□ -0.78
PCDH9-AS4-201ENST00000456459 GTF2E1P29083 439 aaPredicted RBP10.16□□□□□ -0.78
PCDH9-AS4-201ENST00000456459 PPARGC1BQ86YN6 1023 aaKnown RBP10.16□□□□□ -0.78
PCDH9-AS4-201ENST00000456459 NUCKS1Q9H1E3 243 aaKnown RBP10.16□□□□□ -0.78
PCDH9-AS4-201ENST00000456459 ADAMTS8Q9UP79 889 aa10.16□□□□□ -0.78
PCDH9-AS4-201ENST00000456459 A0A1B0GTH6 734 aa10.15□□□□□ -0.78
PCDH9-AS4-201ENST00000456459 POM121CA8CG34 1229 aa10.15□□□□□ -0.78
PCDH9-AS4-201ENST00000456459 SKIP12755 728 aa10.15□□□□□ -0.78
PCDH9-AS4-201ENST00000456459 LYPD4Q6UWN0 246 aa10.15□□□□□ -0.78
PCDH9-AS4-201ENST00000456459 MBIPQ9NS73 344 aa10.15□□□□□ -0.78
PCDH9-AS4-201ENST00000456459 ARHGEF15O94989 841 aa10.14□□□□□ -0.79
PCDH9-AS4-201ENST00000456459 TMEM132AQ24JP5 1023 aa10.14□□□□□ -0.79
PCDH9-AS4-201ENST00000456459 RHBDD1Q8TEB9 315 aa10.14□□□□□ -0.79
PCDH9-AS4-201ENST00000456459 TMEM229AB2RXF0 380 aa10.13□□□□□ -0.79
PCDH9-AS4-201ENST00000456459 ADAMTS19Q8TE59 1207 aa10.13□□□□□ -0.79
PCDH9-AS4-201ENST00000456459 TRERF1Q96PN7 1200 aa10.13□□□□□ -0.79
PCDH9-AS4-201ENST00000456459 PCDHGA11Q9Y5H2 935 aa10.13□□□□□ -0.79
PCDH9-AS4-201ENST00000456459 MSX1P28360 303 aa10.12□□□□□ -0.79
PCDH9-AS4-201ENST00000456459 EML3Q32P44 896 aa10.12□□□□□ -0.79
PCDH9-AS4-201ENST00000456459 NFATC2IPQ8NCF5 419 aa10.12□□□□□ -0.79
PCDH9-AS4-201ENST00000456459 SERTAD1Q9UHV2 236 aa10.12□□□□□ -0.79
PCDH9-AS4-201ENST00000456459 IGF1RP08069 1367 aa10.12□□□□□ -0.79
PCDH9-AS4-201ENST00000456459 CELA2BP08218 269 aaPredicted RBP10.11□□□□□ -0.79
PCDH9-AS4-201ENST00000456459 SMTNP53814 917 aa10.11□□□□□ -0.79
PCDH9-AS4-201ENST00000456459 NCOA4Q13772 614 aa10.11□□□□□ -0.79
PCDH9-AS4-201ENST00000456459 RUBCNLQ9H714 662 aa10.11□□□□□ -0.79
PCDH9-AS4-201ENST00000456459 GSK3AP49840 483 aa10.1□□□□□ -0.79
PCDH9-AS4-201ENST00000456459 UBAP2LQ14157 1087 aaKnown RBP10.1□□□□□ -0.79
PCDH9-AS4-201ENST00000456459 NOD1Q9Y239 953 aa10.1□□□□□ -0.79
PCDH9-AS4-201ENST00000456459 LZTS3O60299 673 aaPredicted RBP10.09□□□□□ -0.79
PCDH9-AS4-201ENST00000456459 PLA2G4AP47712 749 aa10.09□□□□□ -0.79
PCDH9-AS4-201ENST00000456459 KCNMA1Q12791 1236 aa10.09□□□□□ -0.79
PCDH9-AS4-201ENST00000456459 DEPDC4Q8N2C3 294 aa10.09□□□□□ -0.79
PCDH9-AS4-201ENST00000456459 SLC4A9Q96Q91 983 aa10.09□□□□□ -0.79
PCDH9-AS4-201ENST00000456459 USP17L5A8MUK1 530 aa10.08□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 CSB-PGBD3P0DP91 1061 aa10.08□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 MX2P20592 715 aa10.08□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 GTF2IP78347 998 aa10.08□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 HDGFL1Q5TGJ6 251 aa10.08□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 PGBD3Q8N328 593 aa10.08□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 CLUAP1Q96AJ1 413 aa10.08□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 LBRQ14739 615 aaKnown RBP10.07□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 MTFR1Q15390 333 aa10.07□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 ZNF295-AS1Q8N0V1 137 aa10.07□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 UCN2Q96RP3 112 aa10.07□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 CFHR5Q9BXR6 569 aa10.07□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 NIFKQ9BYG3 293 aaKnown RBP10.07□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 IQSEC3Q9UPP2 1182 aaPredicted RBP10.07□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 USP3Q9Y6I4 520 aa10.07□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 A6NJY4 79 aa10.06□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 MAP3K10Q02779 954 aa10.06□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 TBC1D9Q6ZT07 1266 aa10.06□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 ACDQ96AP0 544 aa10.06□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 CRISPLD1Q9H336 500 aa10.06□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 CDK2AP1O14519 115 aa10.05□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 ATP4AP20648 1035 aa10.05□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 EFHC2Q5JST6 749 aa10.05□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.05□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 PSME1Q06323 249 aa10.04□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 AIDAQ96BJ3 306 aa10.04□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 ZNF358Q9NW07 568 aa10.04□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 NSFL1CQ9UNZ2 370 aaKnown RBP10.04□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 RNF225M0QZC1 329 aaPredicted RBP10.03□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 BCRP11274 1271 aa10.03□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 MARSP56192 900 aaKnown RBP10.03□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 FNBP4Q8N3X1 1017 aaPredicted RBP10.03□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 PHF24Q9UPV7 400 aa10.03□□□□□ -0.8
PCDH9-AS4-201ENST00000456459 USP17L3A6NCW0 530 aa10.02□□□□□ -0.81
PCDH9-AS4-201ENST00000456459 USP17L4A6NCW7 530 aa10.02□□□□□ -0.81
PCDH9-AS4-201ENST00000456459 BACH1O14867 736 aa10.02□□□□□ -0.81
PCDH9-AS4-201ENST00000456459 BNIP3LO60238 219 aa10.02□□□□□ -0.81
PCDH9-AS4-201ENST00000456459 RASSF7Q02833 373 aa10.02□□□□□ -0.81
PCDH9-AS4-201ENST00000456459 USP17L2Q6R6M4 530 aa10.02□□□□□ -0.81
PCDH9-AS4-201ENST00000456459 USP17L1Q7RTZ2 530 aa10.02□□□□□ -0.81
PCDH9-AS4-201ENST00000456459 PLEKHM2Q8IWE5 1019 aa10.02□□□□□ -0.81
PCDH9-AS4-201ENST00000456459 C1orf216Q8TAB5 229 aa10.02□□□□□ -0.81
PCDH9-AS4-201ENST00000456459 ABHD17AQ96GS6 310 aa10.02□□□□□ -0.81
PCDH9-AS4-201ENST00000456459 ENAMQ9NRM1 1142 aa10.02□□□□□ -0.81
PCDH9-AS4-201ENST00000456459 NDFIP2Q9NV92 336 aa10.02□□□□□ -0.81
PCDH9-AS4-201ENST00000456459 ATP9BO43861 1147 aa10.01□□□□□ -0.81
PCDH9-AS4-201ENST00000456459 MAP2K3P46734 347 aa10.01□□□□□ -0.81
PCDH9-AS4-201ENST00000456459 PROSER2Q86WR7 435 aaPredicted RBP10.01□□□□□ -0.81
PCDH9-AS4-201ENST00000456459 DNAAF2Q9NVR5 837 aaKnown RBP10.01□□□□□ -0.81
PCDH9-AS4-201ENST00000456459 CABP1Q9NZU7 370 aa10.01□□□□□ -0.81
PCDH9-AS4-201ENST00000456459 ATXN7L1Q9ULK2 861 aaPredicted RBP10.01□□□□□ -0.81
PCDH9-AS4-201ENST00000456459 KIAA1024Q9UPX6 916 aa10.01□□□□□ -0.81
PCDH9-AS4-201ENST00000456459 ZBTB7BO15156 539 aaPredicted RBP10□□□□□ -0.81
PCDH9-AS4-201ENST00000456459 CLDN10P78369 228 aa10□□□□□ -0.81
PCDH9-AS4-201ENST00000456459 KLRG1Q96E93 195 aa10□□□□□ -0.81
PCDH9-AS4-201ENST00000456459 SCHIP1Q9P0W5 487 aaPredicted RBP10□□□□□ -0.81
PCDH9-AS4-201ENST00000456459 PARP3Q9Y6F1 533 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms