RNA–Protein interactions for RNA: ENST00000456133.5

EPCAM-204, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 1,501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-204ENST00000456133 BCS1LQ9Y276 419 aa18.62■□□□□ 0.57
EPCAM-204ENST00000456133 WDR90Q96KV7 1748 aa18.61■□□□□ 0.57
EPCAM-204ENST00000456133 A0A0G2JLW4 131 aa18.6■□□□□ 0.57
EPCAM-204ENST00000456133 TOMM70O94826 608 aa18.6■□□□□ 0.57
EPCAM-204ENST00000456133 EYA1Q99502 592 aa18.6■□□□□ 0.57
EPCAM-204ENST00000456133 CARD14Q9BXL6 1004 aa18.6■□□□□ 0.57
EPCAM-204ENST00000456133 ATG3Q9NT62 314 aa18.6■□□□□ 0.57
EPCAM-204ENST00000456133 C4AP0C0L4 1744 aa18.6■□□□□ 0.57
EPCAM-204ENST00000456133 COL5A3P25940 1745 aaPredicted RBP18.6■□□□□ 0.57
EPCAM-204ENST00000456133 ARFGEF1Q9Y6D6 1849 aa18.6■□□□□ 0.57
EPCAM-204ENST00000456133 PHKG2P15735 406 aa18.59■□□□□ 0.57
EPCAM-204ENST00000456133 TGFB2P61812 414 aa18.59■□□□□ 0.57
EPCAM-204ENST00000456133 ARHGAP27Q6ZUM4 889 aa18.59■□□□□ 0.57
EPCAM-204ENST00000456133 IFNL2Q8IZJ0 200 aa18.59■□□□□ 0.57
EPCAM-204ENST00000456133 DNAJC5GQ8N7S2 189 aa18.59■□□□□ 0.57
EPCAM-204ENST00000456133 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.59■□□□□ 0.571e-7■■□□□ 12.1
EPCAM-204ENST00000456133 MYH14Q7Z406 1995 aaKnown RBP18.59■□□□□ 0.57
EPCAM-204ENST00000456133 NMRK2Q9NPI5 230 aa18.59■□□□□ 0.57
EPCAM-204ENST00000456133 ZNF831Q5JPB2 1677 aa18.58■□□□□ 0.57
EPCAM-204ENST00000456133 C10orf71Q711Q0 1435 aa18.58■□□□□ 0.57
EPCAM-204ENST00000456133 TRAPPC3LQ5T215 181 aa18.58■□□□□ 0.56
EPCAM-204ENST00000456133 RTCBQ9Y3I0 505 aaKnown RBP18.58■□□□□ 0.56
EPCAM-204ENST00000456133 WASHC2AQ641Q2 1341 aa18.58■□□□□ 0.56
EPCAM-204ENST00000456133 NLGN1Q8N2Q7 840 aa18.57■□□□□ 0.56
EPCAM-204ENST00000456133 KDRP35968 1356 aa18.57■□□□□ 0.56
EPCAM-204ENST00000456133 FCHSD2O94868 740 aa18.56■□□□□ 0.56
EPCAM-204ENST00000456133 DPEP1P16444 411 aa18.56■□□□□ 0.56
EPCAM-204ENST00000456133 CDCA8Q53HL2 280 aa18.56■□□□□ 0.56
EPCAM-204ENST00000456133 SLC4A9Q96Q91 983 aa18.56■□□□□ 0.56
EPCAM-204ENST00000456133 ARHGEF1Q92888 912 aaKnown RBP18.55■□□□□ 0.56
EPCAM-204ENST00000456133 CCDC87Q9NVE4 849 aa18.55■□□□□ 0.56
EPCAM-204ENST00000456133 RBM42Q9BTD8 480 aaKnown RBP18.54■□□□□ 0.56
EPCAM-204ENST00000456133 SBF1O95248 1867 aa18.54■□□□□ 0.56
EPCAM-204ENST00000456133 GYS1P13807 737 aa18.54■□□□□ 0.56
EPCAM-204ENST00000456133 RC3H1Q5TC82 1133 aaKnown RBP18.53■□□□□ 0.56
EPCAM-204ENST00000456133 ADRA2BP18089 450 aa18.52■□□□□ 0.56
EPCAM-204ENST00000456133 RFC4P35249 363 aa18.52■□□□□ 0.56
EPCAM-204ENST00000456133 C9orf131Q5VYM1 1079 aa18.52■□□□□ 0.56
EPCAM-204ENST00000456133 POLKQ9UBT6 870 aa18.52■□□□□ 0.56
EPCAM-204ENST00000456133 PARP3Q9Y6F1 533 aa18.52■□□□□ 0.56
EPCAM-204ENST00000456133 RPS6KA4O75676 772 aa18.51■□□□□ 0.55
EPCAM-204ENST00000456133 KCNA3P22001 575 aa18.51■□□□□ 0.55
EPCAM-204ENST00000456133 RBM46Q8TBY0 533 aaKnown RBP18.51■□□□□ 0.55
EPCAM-204ENST00000456133 CNTNAP4Q9C0A0 1308 aa18.5■□□□□ 0.55
EPCAM-204ENST00000456133 ERVV-2B6SEH9 535 aa18.5■□□□□ 0.55
EPCAM-204ENST00000456133 HTRA3P83110 453 aa18.5■□□□□ 0.55
EPCAM-204ENST00000456133 EIF4A2Q14240 407 aaKnown RBP18.5■□□□□ 0.55
EPCAM-204ENST00000456133 C16orf71Q8IYS4 520 aaPredicted RBP18.49■□□□□ 0.55
EPCAM-204ENST00000456133 PLEKHG2Q9H7P9 1386 aa18.49■□□□□ 0.55
EPCAM-204ENST00000456133 KCPQ6ZWJ8 1503 aa18.48■□□□□ 0.55
EPCAM-204ENST00000456133 PIM2Q9P1W9 311 aa18.48■□□□□ 0.55
EPCAM-204ENST00000456133 TNRC6CQ9HCJ0 1690 aaKnown RBP18.47■□□□□ 0.55
EPCAM-204ENST00000456133 TNNT2P45379 298 aaPredicted RBP18.47■□□□□ 0.55
EPCAM-204ENST00000456133 KLRG1Q96E93 195 aa18.47■□□□□ 0.55
EPCAM-204ENST00000456133 DCAF5Q96JK2 942 aa18.47■□□□□ 0.55
EPCAM-204ENST00000456133 TJP1Q07157 1748 aa18.46■□□□□ 0.55
EPCAM-204ENST00000456133 KDM6AO15550 1401 aaPredicted RBP18.46■□□□□ 0.55
EPCAM-204ENST00000456133 HSP90AB1P08238 724 aaKnown RBP18.46■□□□□ 0.55
EPCAM-204ENST00000456133 CCDC88AQ3V6T2 1871 aa18.45■□□□□ 0.54
EPCAM-204ENST00000456133 CABP4P57796 275 aa18.45■□□□□ 0.54
EPCAM-204ENST00000456133 FSTL1Q12841 308 aa18.45■□□□□ 0.54
EPCAM-204ENST00000456133 DALRD3Q5D0E6 543 aaKnown RBP18.45■□□□□ 0.54
EPCAM-204ENST00000456133 RNF181Q9P0P0 153 aa18.45■□□□□ 0.54
EPCAM-204ENST00000456133 SRP68Q9UHB9 627 aaKnown RBP18.45■□□□□ 0.54
EPCAM-204ENST00000456133 KDM2BQ8NHM5 1336 aa18.45■□□□□ 0.54
EPCAM-204ENST00000456133 PLEKHO1Q53GL0 409 aaPredicted RBP18.44■□□□□ 0.54
EPCAM-204ENST00000456133 COL13A1Q5TAT6 717 aaPredicted RBP18.44■□□□□ 0.54
EPCAM-204ENST00000456133 ZNF530Q6P9A1 599 aaPredicted RBP18.44■□□□□ 0.54
EPCAM-204ENST00000456133 RRAGCQ9HB90 399 aa18.44■□□□□ 0.54
EPCAM-204ENST00000456133 PTCD1O75127 700 aaKnown RBP18.44■□□□□ 0.54
EPCAM-204ENST00000456133 DDR1Q08345 913 aa18.44■□□□□ 0.54
EPCAM-204ENST00000456133 FKBP8Q14318 412 aa18.44■□□□□ 0.54
EPCAM-204ENST00000456133 JMYQ8N9B5 988 aa18.44■□□□□ 0.54
EPCAM-204ENST00000456133 AFDNP55196 1824 aaKnown RBP18.43■□□□□ 0.54
EPCAM-204ENST00000456133 CHRNA5P30532 468 aa18.43■□□□□ 0.54
EPCAM-204ENST00000456133 CRKLP46109 303 aaKnown RBP18.43■□□□□ 0.54
EPCAM-204ENST00000456133 SCN11AQ9UI33 1791 aa18.43■□□□□ 0.54
EPCAM-204ENST00000456133 ADAMTS7Q9UKP4 1686 aa18.42■□□□□ 0.54
EPCAM-204ENST00000456133 USP42Q9H9J4 1324 aaKnown RBP18.42■□□□□ 0.54
EPCAM-204ENST00000456133 VIRMAQ69YN4 1812 aaKnown RBP18.41■□□□□ 0.54
EPCAM-204ENST00000456133 MTHFSP49914 203 aa18.4■□□□□ 0.54
EPCAM-204ENST00000456133 PCNTO95613 3336 aa18.4■□□□□ 0.54
EPCAM-204ENST00000456133 CAPN15O75808 1086 aa18.39■□□□□ 0.54
EPCAM-204ENST00000456133 AMOTQ4VCS5 1084 aa18.39■□□□□ 0.54
EPCAM-204ENST00000456133 NFATC2IPQ8NCF5 419 aa18.39■□□□□ 0.54
EPCAM-204ENST00000456133 POLR3GLQ9BT43 218 aa18.39■□□□□ 0.54
EPCAM-204ENST00000456133 DLEC1Q9Y238 1755 aa18.38■□□□□ 0.53
EPCAM-204ENST00000456133 POLRMTO00411 1230 aaKnown RBP18.38■□□□□ 0.53
EPCAM-204ENST00000456133 TM4SF1P30408 202 aa18.38■□□□□ 0.53
EPCAM-204ENST00000456133 C1orf141Q5JVX7 400 aa18.38■□□□□ 0.53
EPCAM-204ENST00000456133 RASSF7Q02833 373 aa18.37■□□□□ 0.53
EPCAM-204ENST00000456133 INTS5Q6P9B9 1019 aaKnown RBP18.37■□□□□ 0.53
EPCAM-204ENST00000456133 AEBP1Q8IUX7 1158 aa18.37■□□□□ 0.53
EPCAM-204ENST00000456133 SMC1BQ8NDV3 1235 aa18.37■□□□□ 0.53
EPCAM-204ENST00000456133 TIAM2Q8IVF5 1701 aa18.36■□□□□ 0.53
EPCAM-204ENST00000456133 NRXN2Q9P2S2 1712 aa18.35■□□□□ 0.53
EPCAM-204ENST00000456133 USPL1Q5W0Q7 1092 aa18.35■□□□□ 0.53
EPCAM-204ENST00000456133 TNS4Q8IZW8 715 aa18.35■□□□□ 0.53
EPCAM-204ENST00000456133 ZPR1O75312 459 aa18.33■□□□□ 0.53
EPCAM-204ENST00000456133 DNAJC10Q8IXB1 793 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms