RNA–Protein interactions for RNA: ENST00000455540.2

CYCSP53-201, Transcript of cytochrome c, somatic pseudogene 53, humanhuman

BASIC

Gene CYCSP53, Length 265 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP53-201ENST00000455540 USP17L17D6RBQ6 530 aa11.04□□□□□ -0.64
CYCSP53-201ENST00000455540 USP17L19D6RCP7 530 aa11.04□□□□□ -0.64
CYCSP53-201ENST00000455540 USP17L20D6RJB6 530 aa11.04□□□□□ -0.64
CYCSP53-201ENST00000455540 IL2RAP01589 272 aa11.04□□□□□ -0.64
CYCSP53-201ENST00000455540 CTSOP43234 321 aaPredicted RBP11.04□□□□□ -0.64
CYCSP53-201ENST00000455540 SEC13P55735 322 aa11.04□□□□□ -0.64
CYCSP53-201ENST00000455540 CENPCQ03188 943 aa11.04□□□□□ -0.64
CYCSP53-201ENST00000455540 USP17L24Q0WX57 530 aa11.04□□□□□ -0.64
CYCSP53-201ENST00000455540 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.04□□□□□ -0.64
CYCSP53-201ENST00000455540 SLC27A3Q5K4L6 730 aa11.04□□□□□ -0.64
CYCSP53-201ENST00000455540 RAB6BQ9NRW1 208 aa11.04□□□□□ -0.64
CYCSP53-201ENST00000455540 HRH3Q9Y5N1 445 aa11.04□□□□□ -0.64
CYCSP53-201ENST00000455540 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.03□□□□□ -0.64
CYCSP53-201ENST00000455540 TMEM229AB2RXF0 380 aa11.03□□□□□ -0.64
CYCSP53-201ENST00000455540 CRTC2Q53ET0 693 aaPredicted RBP11.03□□□□□ -0.64
CYCSP53-201ENST00000455540 ANKMY2Q8IV38 441 aa11.03□□□□□ -0.64
CYCSP53-201ENST00000455540 ZNF594Q96JF6 807 aaPredicted RBP11.03□□□□□ -0.64
CYCSP53-201ENST00000455540 GRIP2Q9C0E4 1043 aa11.03□□□□□ -0.64
CYCSP53-201ENST00000455540 SMTNP53814 917 aa11.02□□□□□ -0.65
CYCSP53-201ENST00000455540 WDR44Q5JSH3 913 aa11.02□□□□□ -0.65
CYCSP53-201ENST00000455540 LYSMD3Q7Z3D4 306 aa11.02□□□□□ -0.65
CYCSP53-201ENST00000455540 FAM200AQ8TCP9 573 aa11.02□□□□□ -0.65
CYCSP53-201ENST00000455540 ZSCAN10Q96SZ4 725 aaPredicted RBP11.02□□□□□ -0.65
CYCSP53-201ENST00000455540 CDCA8Q53HL2 280 aa11.01□□□□□ -0.65
CYCSP53-201ENST00000455540 ZNF787Q6DD87 383 aa11.01□□□□□ -0.65
CYCSP53-201ENST00000455540 RNF217Q8TC41 542 aa11.01□□□□□ -0.65
CYCSP53-201ENST00000455540 ARID3AQ99856 593 aa11.01□□□□□ -0.65
CYCSP53-201ENST00000455540 ZNF358Q9NW07 568 aa11.01□□□□□ -0.65
CYCSP53-201ENST00000455540 KIAA1024Q9UPX6 916 aa11.01□□□□□ -0.65
CYCSP53-201ENST00000455540 CDK2AP1O14519 115 aa11□□□□□ -0.65
CYCSP53-201ENST00000455540 DPYDQ12882 1025 aa11□□□□□ -0.65
CYCSP53-201ENST00000455540 TLR1Q15399 786 aa11□□□□□ -0.65
CYCSP53-201ENST00000455540 NBPF15Q8N660 670 aa11□□□□□ -0.65
CYCSP53-201ENST00000455540 SERBP1Q8NC51 408 aaKnown RBP eCLIP11□□□□□ -0.65
CYCSP53-201ENST00000455540 A6NJY4 79 aa10.99□□□□□ -0.65
CYCSP53-201ENST00000455540 DKK1O94907 266 aa10.99□□□□□ -0.65
CYCSP53-201ENST00000455540 MTFR1Q15390 333 aa10.99□□□□□ -0.65
CYCSP53-201ENST00000455540 GNASQ5JWF2 1037 aa10.99□□□□□ -0.65
CYCSP53-201ENST00000455540 FOXD4L5Q5VV16 416 aaPredicted RBP10.99□□□□□ -0.65
CYCSP53-201ENST00000455540 TMEM214Q6NUQ4 689 aaKnown RBP10.99□□□□□ -0.65
CYCSP53-201ENST00000455540 PPARGC1BQ86YN6 1023 aaKnown RBP10.99□□□□□ -0.65
CYCSP53-201ENST00000455540 FHDC1Q9C0D6 1143 aaPredicted RBP10.99□□□□□ -0.65
CYCSP53-201ENST00000455540 NOVA2Q9UNW9 492 aaKnown RBP10.99□□□□□ -0.65
CYCSP53-201ENST00000455540 FIGNL2A6NMB9 653 aa10.98□□□□□ -0.65
CYCSP53-201ENST00000455540 SPATA31C2B4DYI2 1134 aa10.98□□□□□ -0.65
CYCSP53-201ENST00000455540 SERTAD1Q9UHV2 236 aa10.98□□□□□ -0.65
CYCSP53-201ENST00000455540 DNMT3LQ9UJW3 386 aa10.98□□□□□ -0.65
CYCSP53-201ENST00000455540 GAS2L2Q8NHY3 880 aa10.97□□□□□ -0.65
CYCSP53-201ENST00000455540 SNRPBP14678 240 aaKnown RBP10.96□□□□□ -0.65
CYCSP53-201ENST00000455540 PDE4CQ08493 712 aa10.96□□□□□ -0.65
CYCSP53-201ENST00000455540 SWI5Q1ZZU3 235 aa10.96□□□□□ -0.65
CYCSP53-201ENST00000455540 TAS1R3Q7RTX0 852 aa10.96□□□□□ -0.65
CYCSP53-201ENST00000455540 RHBDD1Q8TEB9 315 aa10.96□□□□□ -0.65
CYCSP53-201ENST00000455540 ARXQ96QS3 562 aa10.96□□□□□ -0.65
CYCSP53-201ENST00000455540 SCHIP1Q9P0W5 487 aaPredicted RBP10.96□□□□□ -0.65
CYCSP53-201ENST00000455540 SFI1A8K8P3 1242 aa10.95□□□□□ -0.66
CYCSP53-201ENST00000455540 STAU1O95793 577 aaKnown RBP10.95□□□□□ -0.66
CYCSP53-201ENST00000455540 PRICKLE2Q7Z3G6 844 aa10.95□□□□□ -0.66
CYCSP53-201ENST00000455540 NIFKQ9BYG3 293 aaKnown RBP10.95□□□□□ -0.66
CYCSP53-201ENST00000455540 POTECB2RU33 542 aa10.94□□□□□ -0.66
CYCSP53-201ENST00000455540 HINFPQ9BQA5 517 aa10.94□□□□□ -0.66
CYCSP53-201ENST00000455540 CSB-PGBD3P0DP91 1061 aa10.93□□□□□ -0.66
CYCSP53-201ENST00000455540 NBPF10Q6P3W6 841 aaKnown RBP10.93□□□□□ -0.66
CYCSP53-201ENST00000455540 CHMP3Q9Y3E7 222 aa10.93□□□□□ -0.66
CYCSP53-201ENST00000455540 EPHA4P54764 986 aa10.92□□□□□ -0.66
CYCSP53-201ENST00000455540 FOXK2Q01167 660 aa10.92□□□□□ -0.66
CYCSP53-201ENST00000455540 TNS4Q8IZW8 715 aa10.92□□□□□ -0.66
CYCSP53-201ENST00000455540 POU4F2Q12837 409 aa10.91□□□□□ -0.66
CYCSP53-201ENST00000455540 NPAS3Q8IXF0 933 aa10.91□□□□□ -0.66
CYCSP53-201ENST00000455540 TSEN2Q8NCE0 465 aaKnown RBP10.91□□□□□ -0.66
CYCSP53-201ENST00000455540 IQSEC3Q9UPP2 1182 aaPredicted RBP10.91□□□□□ -0.66
CYCSP53-201ENST00000455540 ZMIZ1Q9ULJ6 1067 aa10.9□□□□□ -0.66
CYCSP53-201ENST00000455540 DYRK1BQ9Y463 629 aa10.9□□□□□ -0.66
CYCSP53-201ENST00000455540 PSMA6P60900 246 aaKnown RBP10.89□□□□□ -0.67
CYCSP53-201ENST00000455540 PTSQ03393 145 aa10.89□□□□□ -0.67
CYCSP53-201ENST00000455540 SLC9A9Q8IVB4 645 aa10.89□□□□□ -0.67
CYCSP53-201ENST00000455540 STAG2Q8N3U4 1231 aa10.89□□□□□ -0.67
CYCSP53-201ENST00000455540 C1orf216Q8TAB5 229 aa10.89□□□□□ -0.67
CYCSP53-201ENST00000455540 TIMMDC1Q9NPL8 285 aa10.89□□□□□ -0.67
CYCSP53-201ENST00000455540 A0A1B0GTH6 734 aa10.88□□□□□ -0.67
CYCSP53-201ENST00000455540 SLC35F4A4IF30 521 aa10.88□□□□□ -0.67
CYCSP53-201ENST00000455540 SOBPA7XYQ1 873 aa10.88□□□□□ -0.67
CYCSP53-201ENST00000455540 TEAD4Q15561 434 aa10.88□□□□□ -0.67
CYCSP53-201ENST00000455540 C4orf17Q53FE4 359 aa10.88□□□□□ -0.67
CYCSP53-201ENST00000455540 CABP1Q9NZU7 370 aa10.88□□□□□ -0.67
CYCSP53-201ENST00000455540 ATAD2Q6PL18 1390 aa10.88□□□□□ -0.67
CYCSP53-201ENST00000455540 IGFBP4P22692 258 aa10.87□□□□□ -0.67
CYCSP53-201ENST00000455540 NBPF1Q3BBV0 1214 aa10.87□□□□□ -0.67
CYCSP53-201ENST00000455540 TMEM164Q5U3C3 297 aa10.87□□□□□ -0.67
CYCSP53-201ENST00000455540 GMCL1Q96IK5 515 aa10.87□□□□□ -0.67
CYCSP53-201ENST00000455540 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.87□□□□□ -0.67
CYCSP53-201ENST00000455540 NXF1Q9UBU9 619 aaKnown RBP10.87□□□□□ -0.67
CYCSP53-201ENST00000455540 USTQ9Y2C2 406 aa10.87□□□□□ -0.67
CYCSP53-201ENST00000455540 SERTM1A2A2V5 107 aa10.86□□□□□ -0.67
CYCSP53-201ENST00000455540 RHOQP17081 205 aa10.86□□□□□ -0.67
CYCSP53-201ENST00000455540 STK32AQ8WU08 396 aa10.86□□□□□ -0.67
CYCSP53-201ENST00000455540 TSPAN10Q9H1Z9 355 aaPredicted RBP10.86□□□□□ -0.67
CYCSP53-201ENST00000455540 PPP1R12BO60237 982 aaPredicted RBP10.85□□□□□ -0.67
CYCSP53-201ENST00000455540 WEE1P30291 646 aa10.85□□□□□ -0.67
CYCSP53-201ENST00000455540 NOS2P35228 1153 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms