RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 AAMPQ13685 434 aa13.59□□□□□ -0.23
DDR1-240ENST00000454612 TAF7Q15545 349 aaPredicted RBP13.59□□□□□ -0.23
DDR1-240ENST00000454612 PROSER2Q86WR7 435 aaPredicted RBP13.59□□□□□ -0.23
DDR1-240ENST00000454612 IL13P35225 146 aa13.58□□□□□ -0.23
DDR1-240ENST00000454612 NASPP49321 788 aaPredicted RBP13.58□□□□□ -0.23
DDR1-240ENST00000454612 CCDC30Q5VVM6 783 aa13.58□□□□□ -0.23
DDR1-240ENST00000454612 PPIP5K1Q6PFW1 1433 aa13.58□□□□□ -0.23
DDR1-240ENST00000454612 SPG7Q9UQ90 795 aa13.58□□□□□ -0.23
DDR1-240ENST00000454612 TTC21BQ7Z4L5 1316 aa13.58□□□□□ -0.24
DDR1-240ENST00000454612 IFIT2P09913 472 aaKnown RBP13.58□□□□□ -0.24
DDR1-240ENST00000454612 STK3Q13188 491 aa13.58□□□□□ -0.24
DDR1-240ENST00000454612 LRRCC1Q9C099 1032 aa13.58□□□□□ -0.24
DDR1-240ENST00000454612 CD163L1Q9NR16 1453 aa13.58□□□□□ -0.24
DDR1-240ENST00000454612 FIBPO43427 364 aa13.58□□□□□ -0.24
DDR1-240ENST00000454612 HSP90B1P14625 803 aaKnown RBP13.58□□□□□ -0.24
DDR1-240ENST00000454612 TCEANC2Q96MN5 208 aa13.58□□□□□ -0.24
DDR1-240ENST00000454612 PHAXQ9H814 394 aaKnown RBP13.58□□□□□ -0.24
DDR1-240ENST00000454612 FLIIQ13045 1269 aa13.57□□□□□ -0.24
DDR1-240ENST00000454612 NPHP4O75161 1426 aaPredicted RBP13.56□□□□□ -0.24
DDR1-240ENST00000454612 PKP1Q13835 747 aa13.56□□□□□ -0.24
DDR1-240ENST00000454612 BMP2KLQ5H9B9 411 aa13.56□□□□□ -0.24
DDR1-240ENST00000454612 RIC3Q7Z5B4 369 aa13.56□□□□□ -0.24
DDR1-240ENST00000454612 ADAMTS13Q76LX8 1427 aa13.56□□□□□ -0.24
DDR1-240ENST00000454612 ERC2O15083 957 aa13.56□□□□□ -0.24
DDR1-240ENST00000454612 MAPK8IP2Q13387 824 aaPredicted RBP13.56□□□□□ -0.24
DDR1-240ENST00000454612 FERMT3Q86UX7 667 aa13.56□□□□□ -0.24
DDR1-240ENST00000454612 PLEKHM2Q8IWE5 1019 aa13.56□□□□□ -0.24
DDR1-240ENST00000454612 DRC7Q8IY82 874 aa13.56□□□□□ -0.24
DDR1-240ENST00000454612 EYA1Q99502 592 aa13.56□□□□□ -0.24
DDR1-240ENST00000454612 CPA1P15085 419 aa13.56□□□□□ -0.24
DDR1-240ENST00000454612 MRE11P49959 708 aa13.56□□□□□ -0.24
DDR1-240ENST00000454612 NEUROD6Q96NK8 337 aa13.56□□□□□ -0.24
DDR1-240ENST00000454612 ROBO2Q9HCK4 1378 aa13.55□□□□□ -0.24
DDR1-240ENST00000454612 USP32Q8NFA0 1604 aa13.55□□□□□ -0.24
DDR1-240ENST00000454612 SYCE3A1L190 88 aa13.55□□□□□ -0.24
DDR1-240ENST00000454612 CEBPZQ03701 1054 aaKnown RBP13.55□□□□□ -0.24
DDR1-240ENST00000454612 SIRT2Q8IXJ6 389 aa13.55□□□□□ -0.24
DDR1-240ENST00000454612 CCDC8Q9H0W5 538 aaPredicted RBP13.55□□□□□ -0.24
DDR1-240ENST00000454612 MAP3K19Q56UN5 1328 aa13.54□□□□□ -0.24
DDR1-240ENST00000454612 COL3A1P02461 1466 aaPredicted RBP13.54□□□□□ -0.24
DDR1-240ENST00000454612 PI4KAP2A4QPH2 592 aa13.54□□□□□ -0.24
DDR1-240ENST00000454612 GNAT3A8MTJ3 354 aa13.54□□□□□ -0.24
DDR1-240ENST00000454612 RABEP1Q15276 862 aa13.54□□□□□ -0.24
DDR1-240ENST00000454612 PI4KAP1Q8N8J0 262 aa13.54□□□□□ -0.24
DDR1-240ENST00000454612 SLIT1O75093 1534 aa13.54□□□□□ -0.24
DDR1-240ENST00000454612 SLC39A6Q13433 755 aa13.54□□□□□ -0.24
DDR1-240ENST00000454612 AEBP2Q6ZN18 517 aaPredicted RBP13.54□□□□□ -0.24
DDR1-240ENST00000454612 SRCIN1Q9C0H9 1055 aa13.54□□□□□ -0.24
DDR1-240ENST00000454612 FAM177BA6PVY3 158 aa13.54□□□□□ -0.24
DDR1-240ENST00000454612 GNAI3P08754 354 aa13.54□□□□□ -0.24
DDR1-240ENST00000454612 RPAP2Q8IXW5 612 aaPredicted RBP13.54□□□□□ -0.24
DDR1-240ENST00000454612 ARHGAP23Q9P227 1491 aa13.53□□□□□ -0.24
DDR1-240ENST00000454612 PA2G4Q9UQ80 394 aaKnown RBP13.53□□□□□ -0.24
DDR1-240ENST00000454612 BTBD11A6QL63 1104 aa13.53□□□□□ -0.24
DDR1-240ENST00000454612 TTC22Q5TAA0 569 aa13.53□□□□□ -0.24
DDR1-240ENST00000454612 DNAJC2Q99543 621 aaKnown RBP13.53□□□□□ -0.24
DDR1-240ENST00000454612 MX1P20591 662 aa13.53□□□□□ -0.24
DDR1-240ENST00000454612 GORABQ5T7V8 394 aa13.53□□□□□ -0.24
DDR1-240ENST00000454612 CEP85Q6P2H3 762 aa13.53□□□□□ -0.24
DDR1-240ENST00000454612 SYTL4Q96C24 671 aaPredicted RBP13.53□□□□□ -0.24
DDR1-240ENST00000454612 GSPT1P15170 499 aaKnown RBP13.52□□□□□ -0.25
DDR1-240ENST00000454612 NUCB2P80303 420 aa13.52□□□□□ -0.25
DDR1-240ENST00000454612 G3BP1Q13283 466 aaKnown RBP eCLIP13.52□□□□□ -0.25
DDR1-240ENST00000454612 PPP1R42Q7Z4L9 355 aa13.52□□□□□ -0.25
DDR1-240ENST00000454612 ADGRB2O60241 1585 aa13.52□□□□□ -0.25
DDR1-240ENST00000454612 PNMA6EA0A0J9YXQ4 647 aa13.51□□□□□ -0.25
DDR1-240ENST00000454612 NCBP3Q53F19 620 aaKnown RBP13.51□□□□□ -0.25
DDR1-240ENST00000454612 R3HCC1Q9Y3T6 440 aaKnown RBP13.51□□□□□ -0.25
DDR1-240ENST00000454612 BAG4O95429 457 aaKnown RBP13.51□□□□□ -0.25
DDR1-240ENST00000454612 CCT4P50991 539 aaKnown RBP13.51□□□□□ -0.25
DDR1-240ENST00000454612 STK11IPQ8N1F8 1099 aa13.51□□□□□ -0.25
DDR1-240ENST00000454612 CABLES1Q8TDN4 633 aa13.51□□□□□ -0.25
DDR1-240ENST00000454612 BOLA2Q9H3K6 86 aa13.51□□□□□ -0.25
DDR1-240ENST00000454612 PRDM10Q9NQV6 1147 aa13.51□□□□□ -0.25
DDR1-240ENST00000454612 ZHX1Q9UKY1 873 aaPredicted RBP13.51□□□□□ -0.25
DDR1-240ENST00000454612 CHRNA2Q15822 529 aa13.51□□□□□ -0.25
DDR1-240ENST00000454612 CLASRPQ8N2M8 674 aaKnown RBP13.51□□□□□ -0.25
DDR1-240ENST00000454612 LGR6Q9HBX8 967 aa13.51□□□□□ -0.25
DDR1-240ENST00000454612 SMC3Q9UQE7 1217 aa13.51□□□□□ -0.25
DDR1-240ENST00000454612 KCNQ3O43525 872 aa13.5□□□□□ -0.25
DDR1-240ENST00000454612 SKOR2Q2VWA4 1001 aaPredicted RBP13.5□□□□□ -0.25
DDR1-240ENST00000454612 CHPF2Q9P2E5 772 aa13.5□□□□□ -0.25
DDR1-240ENST00000454612 PNPLA6Q8IY17 1366 aa13.5□□□□□ -0.25
DDR1-240ENST00000454612 DDX17Q92841 729 aaKnown RBP13.5□□□□□ -0.25
DDR1-240ENST00000454612 IL16Q14005 1332 aa13.5□□□□□ -0.25
DDR1-240ENST00000454612 PTCD1O75127 700 aaKnown RBP13.5□□□□□ -0.25
DDR1-240ENST00000454612 PDE1AP54750 535 aa13.5□□□□□ -0.25
DDR1-240ENST00000454612 AACSQ86V21 672 aa13.5□□□□□ -0.25
DDR1-240ENST00000454612 ANKRD44Q8N8A2 993 aa13.5□□□□□ -0.25
DDR1-240ENST00000454612 RAPGEF4Q8WZA2 1011 aa13.5□□□□□ -0.25
DDR1-240ENST00000454612 KAT6BQ8WYB5 2073 aa13.5□□□□□ -0.25
DDR1-240ENST00000454612 FSD1Q9BTV5 496 aa13.49□□□□□ -0.25
DDR1-240ENST00000454612 ATF3P18847 181 aa13.49□□□□□ -0.25
DDR1-240ENST00000454612 MSH6P52701 1360 aa13.49□□□□□ -0.25
DDR1-240ENST00000454612 CWF19L2Q2TBE0 894 aaKnown RBP13.49□□□□□ -0.25
DDR1-240ENST00000454612 TTC5Q8N0Z6 440 aa13.49□□□□□ -0.25
DDR1-240ENST00000454612 KLHDC4Q8TBB5 520 aa13.49□□□□□ -0.25
DDR1-240ENST00000454612 DCTPP1Q9H773 170 aa13.49□□□□□ -0.25
DDR1-240ENST00000454612 NDUFB9Q9Y6M9 179 aa13.49□□□□□ -0.25
DDR1-240ENST00000454612 PTPRUQ92729 1446 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms