RNA–Protein interactions for RNA: ENST00000450743.5

UBE2D4-207, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-207ENST00000450743 AKAP4Q5JQC9 854 aa27.48■■□□□ 1.99
UBE2D4-207ENST00000450743 U2SURPO15042 1029 aaKnown RBP27.47■■□□□ 1.99
UBE2D4-207ENST00000450743 ATP6V1AP38606 617 aa27.47■■□□□ 1.99
UBE2D4-207ENST00000450743 ITPK1Q13572 414 aa27.47■■□□□ 1.99
UBE2D4-207ENST00000450743 LINC00116Q8NCU8 138 aa27.47■■□□□ 1.99
UBE2D4-207ENST00000450743 FLAD1Q8NFF5 587 aa27.47■■□□□ 1.99
UBE2D4-207ENST00000450743 AK7Q96M32 723 aa27.47■■□□□ 1.99
UBE2D4-207ENST00000450743 FHDC1Q9C0D6 1143 aaPredicted RBP27.47■■□□□ 1.99
UBE2D4-207ENST00000450743 PPP2R1AP30153 589 aa27.46■■□□□ 1.99
UBE2D4-207ENST00000450743 CFAP53Q96M91 514 aa27.46■■□□□ 1.99
UBE2D4-207ENST00000450743 NFATC2IPQ8NCF5 419 aa27.45■■□□□ 1.98
UBE2D4-207ENST00000450743 POLD1P28340 1107 aa27.44■■□□□ 1.98
UBE2D4-207ENST00000450743 MTHFSDQ2M296 383 aaKnown RBP27.44■■□□□ 1.98
UBE2D4-207ENST00000450743 SYT17Q9BSW7 474 aa27.44■■□□□ 1.98
UBE2D4-207ENST00000450743 COL5A3P25940 1745 aaPredicted RBP27.44■■□□□ 1.98
UBE2D4-207ENST00000450743 SLC4A9Q96Q91 983 aa27.43■■□□□ 1.98
UBE2D4-207ENST00000450743 RBM42Q9BTD8 480 aaKnown RBP27.43■■□□□ 1.98
UBE2D4-207ENST00000450743 ADAMTS7Q9UKP4 1686 aa27.43■■□□□ 1.98
UBE2D4-207ENST00000450743 AMIGO3Q86WK7 504 aa27.42■■□□□ 1.98
UBE2D4-207ENST00000450743 LGR6Q9HBX8 967 aa27.42■■□□□ 1.98
UBE2D4-207ENST00000450743 MYH14Q7Z406 1995 aaKnown RBP27.4■■□□□ 1.98
UBE2D4-207ENST00000450743 MAP3K5Q99683 1374 aa27.4■■□□□ 1.98
UBE2D4-207ENST00000450743 DCAF8L1A6NGE4 600 aa27.39■■□□□ 1.98
UBE2D4-207ENST00000450743 RNMTO43148 476 aaKnown RBP27.39■■□□□ 1.98
UBE2D4-207ENST00000450743 MRC1P22897 1456 aa27.38■■□□□ 1.97
UBE2D4-207ENST00000450743 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.38■■□□□ 1.97
UBE2D4-207ENST00000450743 PHF14O94880 888 aa27.38■■□□□ 1.97
UBE2D4-207ENST00000450743 SSFA2P28290 1259 aa27.38■■□□□ 1.97
UBE2D4-207ENST00000450743 SMIM5Q71RC9 77 aa27.38■■□□□ 1.97
UBE2D4-207ENST00000450743 SLC52A2Q9HAB3 445 aa27.38■■□□□ 1.97
UBE2D4-207ENST00000450743 GNPATO15228 680 aa27.37■■□□□ 1.97
UBE2D4-207ENST00000450743 MSL1Q68DK7 614 aa27.37■■□□□ 1.97
UBE2D4-207ENST00000450743 NUDCQ9Y266 331 aa27.37■■□□□ 1.97
UBE2D4-207ENST00000450743 PTCD1O75127 700 aaKnown RBP27.36■■□□□ 1.97
UBE2D4-207ENST00000450743 TJP1Q07157 1748 aa27.35■■□□□ 1.97
UBE2D4-207ENST00000450743 CICQ96RK0 1608 aaPredicted RBP27.34■■□□□ 1.97
UBE2D4-207ENST00000450743 GAS2L2Q8NHY3 880 aa27.34■■□□□ 1.97
UBE2D4-207ENST00000450743 RSPH6AQ9H0K4 717 aa27.34■■□□□ 1.97
UBE2D4-207ENST00000450743 RC3H1Q5TC82 1133 aaKnown RBP27.33■■□□□ 1.97
UBE2D4-207ENST00000450743 KLHL34Q8N239 644 aa27.33■■□□□ 1.97
UBE2D4-207ENST00000450743 PRKAR2BP31323 418 aa27.32■■□□□ 1.96
UBE2D4-207ENST00000450743 CNTNAP4Q9C0A0 1308 aa27.32■■□□□ 1.96
UBE2D4-207ENST00000450743 SIPA1L3O60292 1781 aaPredicted RBP27.31■■□□□ 1.96
UBE2D4-207ENST00000450743 U2AF1L5P0DN76 240 aaPredicted RBP27.31■■□□□ 1.96
UBE2D4-207ENST00000450743 U2AF1Q01081 240 aaKnown RBP eCLIP27.31■■□□□ 1.96
UBE2D4-207ENST00000450743 PHACTR3Q96KR7 559 aa27.31■■□□□ 1.96
UBE2D4-207ENST00000450743 GNAT3A8MTJ3 354 aa27.3■■□□□ 1.96
UBE2D4-207ENST00000450743 RTCBQ9Y3I0 505 aaKnown RBP27.3■■□□□ 1.96
UBE2D4-207ENST00000450743 UBR2Q8IWV8 1755 aa27.29■■□□□ 1.96
UBE2D4-207ENST00000450743 SLC39A6Q13433 755 aa27.28■■□□□ 1.96
UBE2D4-207ENST00000450743 TRAPPC3LQ5T215 181 aa27.28■■□□□ 1.96
UBE2D4-207ENST00000450743 IL17REQ8NFR9 667 aa27.28■■□□□ 1.96
UBE2D4-207ENST00000450743 RPS6KA4O75676 772 aa27.27■■□□□ 1.96
UBE2D4-207ENST00000450743 FCHSD2O94868 740 aa27.27■■□□□ 1.96
UBE2D4-207ENST00000450743 C4AP0C0L4 1744 aa27.27■■□□□ 1.96
UBE2D4-207ENST00000450743 CHD4Q14839 1912 aa27.26■■□□□ 1.95
UBE2D4-207ENST00000450743 DDX10Q13206 875 aaKnown RBP27.26■■□□□ 1.95
UBE2D4-207ENST00000450743 KCPQ6ZWJ8 1503 aa27.26■■□□□ 1.95
UBE2D4-207ENST00000450743 ADRA2BP18089 450 aa27.25■■□□□ 1.95
UBE2D4-207ENST00000450743 CRKLP46109 303 aaKnown RBP27.25■■□□□ 1.95
UBE2D4-207ENST00000450743 NLGN2Q8NFZ4 835 aa27.24■■□□□ 1.95
UBE2D4-207ENST00000450743 ARHGEF1Q92888 912 aaKnown RBP27.24■■□□□ 1.95
UBE2D4-207ENST00000450743 TEFQ10587 303 aa27.23■■□□□ 1.95
UBE2D4-207ENST00000450743 DNAJC10Q8IXB1 793 aa27.23■■□□□ 1.95
UBE2D4-207ENST00000450743 DLG5Q8TDM6 1919 aa27.21■■□□□ 1.95
UBE2D4-207ENST00000450743 CEMIPQ8WUJ3 1361 aa27.21■■□□□ 1.95
UBE2D4-207ENST00000450743 RFC4P35249 363 aa27.2■■□□□ 1.94
UBE2D4-207ENST00000450743 RALBP1Q15311 655 aa27.2■■□□□ 1.94
UBE2D4-207ENST00000450743 INTS5Q6P9B9 1019 aaKnown RBP27.2■■□□□ 1.94
UBE2D4-207ENST00000450743 CD2APQ9Y5K6 639 aa27.2■■□□□ 1.94
UBE2D4-207ENST00000450743 YY1P25490 414 aa27.18■■□□□ 1.94
UBE2D4-207ENST00000450743 TTC5Q8N0Z6 440 aa27.18■■□□□ 1.94
UBE2D4-207ENST00000450743 VSIG10Q8N0Z9 540 aa27.18■■□□□ 1.94
UBE2D4-207ENST00000450743 CYP19A1P11511 503 aaPredicted RBP27.17■■□□□ 1.94
UBE2D4-207ENST00000450743 GPR162Q16538 588 aa27.17■■□□□ 1.94
UBE2D4-207ENST00000450743 NLGN1Q8N2Q7 840 aa27.17■■□□□ 1.94
UBE2D4-207ENST00000450743 CCDC87Q9NVE4 849 aa27.17■■□□□ 1.94
UBE2D4-207ENST00000450743 MMP10P09238 476 aa27.16■■□□□ 1.94
UBE2D4-207ENST00000450743 ZNF790Q6PG37 636 aa27.16■■□□□ 1.94
UBE2D4-207ENST00000450743 GYS1P13807 737 aa27.15■■□□□ 1.94
UBE2D4-207ENST00000450743 RTF1Q92541 710 aaKnown RBP27.14■■□□□ 1.94
UBE2D4-207ENST00000450743 ZNF496Q96IT1 587 aaPredicted RBP27.14■■□□□ 1.94
UBE2D4-207ENST00000450743 KIF13BQ9NQT8 1826 aa27.13■■□□□ 1.93
UBE2D4-207ENST00000450743 PELP1Q8IZL8 1130 aaKnown RBP27.13■■□□□ 1.93
UBE2D4-207ENST00000450743 HTATSF1O43719 755 aaKnown RBP27.12■■□□□ 1.93
UBE2D4-207ENST00000450743 MCM10Q7L590 875 aa27.12■■□□□ 1.93
UBE2D4-207ENST00000450743 SOS1Q07889 1333 aaPredicted RBP27.12■■□□□ 1.93
UBE2D4-207ENST00000450743 HEG1Q9ULI3 1381 aa27.11■■□□□ 1.93
UBE2D4-207ENST00000450743 BTBD11A6QL63 1104 aa27.11■■□□□ 1.93
UBE2D4-207ENST00000450743 NEFMP07197 916 aa27.11■■□□□ 1.93
UBE2D4-207ENST00000450743 SRP68Q9UHB9 627 aaKnown RBP27.11■■□□□ 1.93
UBE2D4-207ENST00000450743 USP42Q9H9J4 1324 aaKnown RBP27.11■■□□□ 1.93
UBE2D4-207ENST00000450743 ZEB1P37275 1124 aaPredicted RBP27.1■■□□□ 1.93
UBE2D4-207ENST00000450743 PLEKHF1Q96S99 279 aa27.1■■□□□ 1.93
UBE2D4-207ENST00000450743 ZBTB1Q9Y2K1 713 aa27.1■■□□□ 1.93
UBE2D4-207ENST00000450743 UTRNP46939 3433 aa27.09■■□□□ 1.93
UBE2D4-207ENST00000450743 DCTN1Q14203 1278 aa27.09■■□□□ 1.93
UBE2D4-207ENST00000450743 KCNQ3O43525 872 aa27.08■■□□□ 1.93
UBE2D4-207ENST00000450743 STARD3NLO95772 234 aa27.08■■□□□ 1.93
UBE2D4-207ENST00000450743 FMNL2Q96PY5 1086 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms