RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 CEP131Q9UPN4 1083 aa16.41■□□□□ 0.22
RAPGEF3-205ENST00000449771 AKNAQ7Z591 1439 aa16.41■□□□□ 0.22
RAPGEF3-205ENST00000449771 WDHD1O75717 1129 aaPredicted RBP16.41■□□□□ 0.22
RAPGEF3-205ENST00000449771 DHX8Q14562 1220 aaKnown RBP16.41■□□□□ 0.22
RAPGEF3-205ENST00000449771 NGLY1Q96IV0 654 aa16.41■□□□□ 0.22
RAPGEF3-205ENST00000449771 ANKRD18AQ8IVF6 992 aa16.41■□□□□ 0.22
RAPGEF3-205ENST00000449771 PPP6R1Q9UPN7 881 aa16.41■□□□□ 0.22
RAPGEF3-205ENST00000449771 EXOC6BQ9Y2D4 811 aa16.41■□□□□ 0.22
RAPGEF3-205ENST00000449771 PAXIP1Q6ZW49 1069 aaPredicted RBP16.4■□□□□ 0.22
RAPGEF3-205ENST00000449771 THUMPD2Q9BTF0 503 aaKnown RBP16.4■□□□□ 0.22
RAPGEF3-205ENST00000449771 H0YHG0 523 aa16.4■□□□□ 0.22
RAPGEF3-205ENST00000449771 TRIM21P19474 475 aaKnown RBP16.4■□□□□ 0.22
RAPGEF3-205ENST00000449771 ZRSR2Q15696 482 aaKnown RBP16.4■□□□□ 0.22
RAPGEF3-205ENST00000449771 TMEM57Q8N5G2 664 aa16.4■□□□□ 0.22
RAPGEF3-205ENST00000449771 DDX11Q96FC9 970 aa16.4■□□□□ 0.22
RAPGEF3-205ENST00000449771 TRMT112Q9UI30 125 aaKnown RBP16.4■□□□□ 0.22
RAPGEF3-205ENST00000449771 GOLGA6L10A6NI86 522 aa16.4■□□□□ 0.22
RAPGEF3-205ENST00000449771 TAF7Q15545 349 aaPredicted RBP16.4■□□□□ 0.22
RAPGEF3-205ENST00000449771 CCDC191Q8NCU4 936 aa16.4■□□□□ 0.22
RAPGEF3-205ENST00000449771 KIF1BPQ96EK5 621 aa16.4■□□□□ 0.22
RAPGEF3-205ENST00000449771 CD109Q6YHK3 1445 aa16.4■□□□□ 0.22
RAPGEF3-205ENST00000449771 RAB11FIP3O75154 756 aa16.39■□□□□ 0.21
RAPGEF3-205ENST00000449771 SLC5A1P13866 664 aa16.39■□□□□ 0.21
RAPGEF3-205ENST00000449771 IFIT5Q13325 482 aaKnown RBP16.39■□□□□ 0.21
RAPGEF3-205ENST00000449771 PRDM10Q9NQV6 1147 aa16.39■□□□□ 0.21
RAPGEF3-205ENST00000449771 PHF8Q9UPP1 1060 aa16.39■□□□□ 0.21
RAPGEF3-205ENST00000449771 HSP90AB3PQ58FF7 597 aa16.39■□□□□ 0.21
RAPGEF3-205ENST00000449771 POLA1P09884 1462 aaPredicted RBP16.38■□□□□ 0.21
RAPGEF3-205ENST00000449771 U3KPZ7 1027 aaPredicted RBP16.38■□□□□ 0.21
RAPGEF3-205ENST00000449771 HMGN5P82970 282 aaKnown RBP16.38■□□□□ 0.21
RAPGEF3-205ENST00000449771 CCDC96Q2M329 555 aa16.38■□□□□ 0.21
RAPGEF3-205ENST00000449771 PPP4R3AQ6IN85 833 aa16.38■□□□□ 0.21
RAPGEF3-205ENST00000449771 NME9Q86XW9 330 aa16.38■□□□□ 0.21
RAPGEF3-205ENST00000449771 SSR1P43307 286 aaKnown RBP16.38■□□□□ 0.21
RAPGEF3-205ENST00000449771 CDK13Q14004 1512 aaKnown RBP16.38■□□□□ 0.21
RAPGEF3-205ENST00000449771 FAM177A1Q8N128 213 aaPredicted RBP16.38■□□□□ 0.21
RAPGEF3-205ENST00000449771 NAPBQ9H115 298 aa16.38■□□□□ 0.21
RAPGEF3-205ENST00000449771 BOLA2Q9H3K6 86 aa16.37■□□□□ 0.21
RAPGEF3-205ENST00000449771 AMOTL2Q9Y2J4 779 aa16.37■□□□□ 0.21
RAPGEF3-205ENST00000449771 MAP3K12Q12852 859 aa16.37■□□□□ 0.21
RAPGEF3-205ENST00000449771 EXOC5O00471 708 aa16.37■□□□□ 0.21
RAPGEF3-205ENST00000449771 FOXO3O43524 673 aa16.37■□□□□ 0.21
RAPGEF3-205ENST00000449771 MX1P20591 662 aa16.37■□□□□ 0.21
RAPGEF3-205ENST00000449771 NUP62CLQ9H1M0 184 aa16.37■□□□□ 0.21
RAPGEF3-205ENST00000449771 ARHGEF11O15085 1522 aa16.37■□□□□ 0.21
RAPGEF3-205ENST00000449771 EIF5P55010 431 aaKnown RBP16.36■□□□□ 0.21
RAPGEF3-205ENST00000449771 ZNF444Q8N0Y2 327 aaPredicted RBP16.36■□□□□ 0.21
RAPGEF3-205ENST00000449771 ANKRD18BA2A2Z9 1011 aa16.36■□□□□ 0.21
RAPGEF3-205ENST00000449771 SMARCA5O60264 1052 aaPredicted RBP16.36■□□□□ 0.21
RAPGEF3-205ENST00000449771 WDR78Q5VTH9 848 aa16.36■□□□□ 0.21
RAPGEF3-205ENST00000449771 ENOX2Q16206 610 aaKnown RBP16.36■□□□□ 0.21
RAPGEF3-205ENST00000449771 PRPF40BQ6NWY9 871 aaKnown RBP16.36■□□□□ 0.21
RAPGEF3-205ENST00000449771 UPF3BQ9BZI7 483 aaKnown RBP16.36■□□□□ 0.21
RAPGEF3-205ENST00000449771 CCDC141Q6ZP82 1450 aa16.35■□□□□ 0.21
RAPGEF3-205ENST00000449771 PPP1R12BO60237 982 aaPredicted RBP16.35■□□□□ 0.21
RAPGEF3-205ENST00000449771 GLRX3O76003 335 aaKnown RBP16.35■□□□□ 0.21
RAPGEF3-205ENST00000449771 CUL5Q93034 780 aa16.35■□□□□ 0.21
RAPGEF3-205ENST00000449771 MYCNP04198 464 aaPredicted RBP16.35■□□□□ 0.21
RAPGEF3-205ENST00000449771 POTEJP0CG39 1038 aa16.35■□□□□ 0.21
RAPGEF3-205ENST00000449771 LRPPRCP42704 1394 aaKnown RBP16.35■□□□□ 0.21
RAPGEF3-205ENST00000449771 RANBP6O60518 1105 aaKnown RBP16.35■□□□□ 0.21
RAPGEF3-205ENST00000449771 SLF2Q8IX21 1173 aa16.35■□□□□ 0.21
RAPGEF3-205ENST00000449771 DNAI2Q9GZS0 605 aa16.35■□□□□ 0.21
RAPGEF3-205ENST00000449771 SMTNL1A8MU46 457 aa16.34■□□□□ 0.21
RAPGEF3-205ENST00000449771 TSPYL1Q9H0U9 437 aa16.34■□□□□ 0.21
RAPGEF3-205ENST00000449771 TIAM1Q13009 1591 aa16.34■□□□□ 0.21
RAPGEF3-205ENST00000449771 MPNDQ8N594 471 aa16.34■□□□□ 0.21
RAPGEF3-205ENST00000449771 GPTP24298 496 aa16.33■□□□□ 0.21
RAPGEF3-205ENST00000449771 SLFN5Q08AF3 891 aa16.33■□□□□ 0.21
RAPGEF3-205ENST00000449771 CTCFLQ8NI51 663 aaPredicted RBP16.33■□□□□ 0.21
RAPGEF3-205ENST00000449771 KIAA1328Q86T90 577 aa16.33■□□□□ 0.2
RAPGEF3-205ENST00000449771 LEKR1Q6ZMV7 388 aa16.33■□□□□ 0.2
RAPGEF3-205ENST00000449771 CCDC83Q8IWF9 413 aa16.33■□□□□ 0.2
RAPGEF3-205ENST00000449771 C6orf229H3BNL8 230 aa16.33■□□□□ 0.2
RAPGEF3-205ENST00000449771 JAKMIP3Q5VZ66 844 aa16.33■□□□□ 0.2
RAPGEF3-205ENST00000449771 KRT28Q7Z3Y7 464 aa16.33■□□□□ 0.2
RAPGEF3-205ENST00000449771 CENPHQ9H3R5 247 aa16.33■□□□□ 0.2
RAPGEF3-205ENST00000449771 HYPKQ9NX55 129 aa16.33■□□□□ 0.2
RAPGEF3-205ENST00000449771 ADGRL1O94910 1474 aa16.33■□□□□ 0.2
RAPGEF3-205ENST00000449771 CCDC8Q9H0W5 538 aaPredicted RBP16.32■□□□□ 0.2
RAPGEF3-205ENST00000449771 CEBPAP49715 358 aaPredicted RBP16.32■□□□□ 0.2
RAPGEF3-205ENST00000449771 ZNF397Q8NF99 534 aaPredicted RBP16.32■□□□□ 0.2
RAPGEF3-205ENST00000449771 TAF4BQ92750 862 aa16.32■□□□□ 0.2
RAPGEF3-205ENST00000449771 TAX1BP1Q86VP1 789 aa16.32■□□□□ 0.2
RAPGEF3-205ENST00000449771 BBXQ8WY36 941 aaPredicted RBP16.32■□□□□ 0.2
RAPGEF3-205ENST00000449771 UBA5Q9GZZ9 404 aa16.32■□□□□ 0.2
RAPGEF3-205ENST00000449771 EMILIN1Q9Y6C2 1016 aa16.32■□□□□ 0.2
RAPGEF3-205ENST00000449771 CCDC196A0A1B0GTZ2 297 aa16.32■□□□□ 0.2
RAPGEF3-205ENST00000449771 IQCEQ6IPM2 695 aa16.32■□□□□ 0.2
RAPGEF3-205ENST00000449771 DNAAF4Q8WXU2 420 aa16.32■□□□□ 0.2
RAPGEF3-205ENST00000449771 TSG101Q99816 390 aa16.32■□□□□ 0.2
RAPGEF3-205ENST00000449771 MAGI1Q96QZ7 1491 aaPredicted RBP16.32■□□□□ 0.2
RAPGEF3-205ENST00000449771 SLC12A7Q9Y666 1083 aa16.31■□□□□ 0.2
RAPGEF3-205ENST00000449771 FAM135AQ9P2D6 1515 aa16.31■□□□□ 0.2
RAPGEF3-205ENST00000449771 ESPNB1AK53 854 aa16.31■□□□□ 0.2
RAPGEF3-205ENST00000449771 WASLO00401 505 aaPredicted RBP16.31■□□□□ 0.2
RAPGEF3-205ENST00000449771 GBP2P32456 591 aaPredicted RBP16.31■□□□□ 0.2
RAPGEF3-205ENST00000449771 IQCA1Q86XH1 822 aa16.31■□□□□ 0.2
RAPGEF3-205ENST00000449771 EHMT1Q9H9B1 1298 aa16.31■□□□□ 0.2
RAPGEF3-205ENST00000449771 DNMBPQ6XZF7 1577 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms