RNA–Protein interactions for RNA: ENST00000447246.1

LRPPRC-205, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best)

Gene LRPPRC, Length 1,209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-205ENST00000447246 SIK1P57059 783 aa20.79■□□□□ 0.92
LRPPRC-205ENST00000447246 RASSF7Q02833 373 aa20.79■□□□□ 0.92
LRPPRC-205ENST00000447246 RAPGEF4Q8WZA2 1011 aa20.79■□□□□ 0.92
LRPPRC-205ENST00000447246 PIGBQ92521 554 aa20.79■□□□□ 0.92
LRPPRC-205ENST00000447246 PRDM10Q9NQV6 1147 aa20.79■□□□□ 0.92
LRPPRC-205ENST00000447246 PCDH11XQ9BZA7 1347 aa20.78■□□□□ 0.92
LRPPRC-205ENST00000447246 PCDH11YQ9BZA8 1340 aa20.78■□□□□ 0.92
LRPPRC-205ENST00000447246 TMC1Q8TDI8 760 aa20.78■□□□□ 0.92
LRPPRC-205ENST00000447246 DALRD3Q5D0E6 543 aaKnown RBP20.77■□□□□ 0.92
LRPPRC-205ENST00000447246 PIM2Q9P1W9 311 aa20.77■□□□□ 0.92
LRPPRC-205ENST00000447246 CYP27B1O15528 508 aa20.76■□□□□ 0.91
LRPPRC-205ENST00000447246 VEGFAP15692 232 aaPredicted RBP20.76■□□□□ 0.91
LRPPRC-205ENST00000447246 TATP17735 454 aaPredicted RBP20.76■□□□□ 0.91
LRPPRC-205ENST00000447246 TMF1P82094 1093 aa20.76■□□□□ 0.91
LRPPRC-205ENST00000447246 ABHD8Q96I13 439 aa20.76■□□□□ 0.91
LRPPRC-205ENST00000447246 HDGFL2Q7Z4V5 671 aaPredicted RBP20.75■□□□□ 0.91
LRPPRC-205ENST00000447246 PIAS4Q8N2W9 510 aaPredicted RBP20.75■□□□□ 0.91
LRPPRC-205ENST00000447246 CGNL1Q0VF96 1302 aa20.75■□□□□ 0.91
LRPPRC-205ENST00000447246 TIAM2Q8IVF5 1701 aa20.74■□□□□ 0.91
LRPPRC-205ENST00000447246 NLGN1Q8N2Q7 840 aa20.74■□□□□ 0.91
LRPPRC-205ENST00000447246 SLC12A5Q9H2X9 1139 aa20.74■□□□□ 0.91
LRPPRC-205ENST00000447246 A0A1W2PP64 1363 aa20.73■□□□□ 0.91
LRPPRC-205ENST00000447246 CHRNA5P30532 468 aa20.73■□□□□ 0.91
LRPPRC-205ENST00000447246 ATP6V1AP38606 617 aa20.73■□□□□ 0.91
LRPPRC-205ENST00000447246 CTCFP49711 727 aaPredicted RBP20.73■□□□□ 0.91
LRPPRC-205ENST00000447246 PARP3Q9Y6F1 533 aa20.73■□□□□ 0.91
LRPPRC-205ENST00000447246 LBX1P52954 281 aa20.72■□□□□ 0.91
LRPPRC-205ENST00000447246 AIDAQ96BJ3 306 aa20.72■□□□□ 0.91
LRPPRC-205ENST00000447246 GLTPD2A6NH11 291 aa20.71■□□□□ 0.91
LRPPRC-205ENST00000447246 GYS1P13807 737 aa20.71■□□□□ 0.91
LRPPRC-205ENST00000447246 MLLT1Q03111 559 aaPredicted RBP20.71■□□□□ 0.91
LRPPRC-205ENST00000447246 TRAPPC3LQ5T215 181 aa20.71■□□□□ 0.91
LRPPRC-205ENST00000447246 CREBZFQ9NS37 354 aa20.71■□□□□ 0.91
LRPPRC-205ENST00000447246 ASAP1Q9ULH1 1129 aa20.71■□□□□ 0.91
LRPPRC-205ENST00000447246 RRS1Q15050 365 aaKnown RBP20.7■□□□□ 0.9
LRPPRC-205ENST00000447246 RTCBQ9Y3I0 505 aaKnown RBP20.69■□□□□ 0.9
LRPPRC-205ENST00000447246 CNTNAP1P78357 1384 aa20.69■□□□□ 0.9
LRPPRC-205ENST00000447246 KDM6AO15550 1401 aaPredicted RBP20.69■□□□□ 0.9
LRPPRC-205ENST00000447246 POTECB2RU33 542 aa20.68■□□□□ 0.9
LRPPRC-205ENST00000447246 ARHGEF1Q92888 912 aaKnown RBP20.68■□□□□ 0.9
LRPPRC-205ENST00000447246 TNRC18O15417 2968 aaPredicted RBP20.67■□□□□ 0.9
LRPPRC-205ENST00000447246 COG3Q96JB2 828 aa20.67■□□□□ 0.9
LRPPRC-205ENST00000447246 ZC3H4Q9UPT8 1303 aaKnown RBP20.67■□□□□ 0.9
LRPPRC-205ENST00000447246 ROCK2O75116 1388 aaKnown RBP20.67■□□□□ 0.9
LRPPRC-205ENST00000447246 SMG6Q86US8 1419 aaKnown RBP20.67■□□□□ 0.9
LRPPRC-205ENST00000447246 CCDC88AQ3V6T2 1871 aa20.67■□□□□ 0.9
LRPPRC-205ENST00000447246 CCDC85CA6NKD9 419 aa20.66■□□□□ 0.9
LRPPRC-205ENST00000447246 RTL1A6NKG5 1358 aa20.66■□□□□ 0.9
LRPPRC-205ENST00000447246 TMOD3Q9NYL9 352 aa20.65■□□□□ 0.9
LRPPRC-205ENST00000447246 POTEIP0CG38 1075 aa20.64■□□□□ 0.89
LRPPRC-205ENST00000447246 POTEJP0CG39 1038 aa20.64■□□□□ 0.89
LRPPRC-205ENST00000447246 LMNB1P20700 586 aa20.64■□□□□ 0.89
LRPPRC-205ENST00000447246 RFC4P35249 363 aa20.64■□□□□ 0.89
LRPPRC-205ENST00000447246 DDR1Q08345 913 aa20.64■□□□□ 0.89
LRPPRC-205ENST00000447246 TERF2IPQ9NYB0 399 aa20.64■□□□□ 0.89
LRPPRC-205ENST00000447246 VEGFBP49765 207 aa20.63■□□□□ 0.89
LRPPRC-205ENST00000447246 KDRP35968 1356 aa20.62■□□□□ 0.89
LRPPRC-205ENST00000447246 COL5A3P25940 1745 aaPredicted RBP20.62■□□□□ 0.89
LRPPRC-205ENST00000447246 HSPA8P11142 646 aaKnown RBP20.62■□□□□ 0.89
LRPPRC-205ENST00000447246 SRP68Q9UHB9 627 aaKnown RBP20.62■□□□□ 0.89
LRPPRC-205ENST00000447246 VIRMAQ69YN4 1812 aaKnown RBP20.62■□□□□ 0.89
LRPPRC-205ENST00000447246 CHADLQ6NUI6 762 aa20.61■□□□□ 0.89
LRPPRC-205ENST00000447246 SLC4A9Q96Q91 983 aa20.61■□□□□ 0.89
LRPPRC-205ENST00000447246 ATG3Q9NT62 314 aa20.61■□□□□ 0.89
LRPPRC-205ENST00000447246 WBP1LQ9NX94 342 aa20.61■□□□□ 0.89
LRPPRC-205ENST00000447246 FKBP8Q14318 412 aa20.59■□□□□ 0.89
LRPPRC-205ENST00000447246 NKX1-1Q15270 411 aaPredicted RBP20.59■□□□□ 0.89
LRPPRC-205ENST00000447246 HSP90AB2PQ58FF8 381 aa20.59■□□□□ 0.89
LRPPRC-205ENST00000447246 L3MBTL2Q969R5 705 aa20.59■□□□□ 0.89
LRPPRC-205ENST00000447246 MYH14Q7Z406 1995 aaKnown RBP20.58■□□□□ 0.89
LRPPRC-205ENST00000447246 RGS19P49795 217 aa20.58■□□□□ 0.89
LRPPRC-205ENST00000447246 RBM42Q9BTD8 480 aaKnown RBP20.58■□□□□ 0.89
LRPPRC-205ENST00000447246 NFKBIEO00221 500 aa20.56■□□□□ 0.88
LRPPRC-205ENST00000447246 RPS6KA4O75676 772 aa20.56■□□□□ 0.88
LRPPRC-205ENST00000447246 CNTNAP4Q9C0A0 1308 aa20.55■□□□□ 0.88
LRPPRC-205ENST00000447246 CFAP44Q96MT7 982 aa20.55■□□□□ 0.88
LRPPRC-205ENST00000447246 PDE4DIPQ5VU43 2346 aa20.55■□□□□ 0.88
LRPPRC-205ENST00000447246 INSRP06213 1382 aa20.54■□□□□ 0.88
LRPPRC-205ENST00000447246 RC3H1Q5TC82 1133 aaKnown RBP20.53■□□□□ 0.88
LRPPRC-205ENST00000447246 DLEC1Q9Y238 1755 aa20.53■□□□□ 0.88
LRPPRC-205ENST00000447246 PASKQ96RG2 1323 aa20.53■□□□□ 0.88
LRPPRC-205ENST00000447246 POLRMTO00411 1230 aaKnown RBP20.52■□□□□ 0.88
LRPPRC-205ENST00000447246 DPY19L2Q6NUT2 758 aa20.52■□□□□ 0.88
LRPPRC-205ENST00000447246 SPG7Q9UQ90 795 aa20.52■□□□□ 0.88
LRPPRC-205ENST00000447246 USP42Q9H9J4 1324 aaKnown RBP20.52■□□□□ 0.87
LRPPRC-205ENST00000447246 ZNF831Q5JPB2 1677 aa20.51■□□□□ 0.87
LRPPRC-205ENST00000447246 GGNBP2Q9H3C7 697 aa20.51■□□□□ 0.87
LRPPRC-205ENST00000447246 FLT4P35916 1363 aa20.5■□□□□ 0.87
LRPPRC-205ENST00000447246 AFDNP55196 1824 aaKnown RBP20.5■□□□□ 0.87
LRPPRC-205ENST00000447246 TMEM88BA6NKF7 163 aa20.49■□□□□ 0.87
LRPPRC-205ENST00000447246 DDNO94850 711 aaPredicted RBP20.48■□□□□ 0.87
LRPPRC-205ENST00000447246 PHKG2P15735 406 aa20.48■□□□□ 0.87
LRPPRC-205ENST00000447246 DICER1Q9UPY3 1922 aaKnown RBP20.48■□□□□ 0.87
LRPPRC-205ENST00000447246 ERFEQ4G0M1 354 aa20.47■□□□□ 0.87
LRPPRC-205ENST00000447246 TTLL6Q8N841 843 aa20.47■□□□□ 0.87
LRPPRC-205ENST00000447246 NCAPD2Q15021 1401 aa20.46■□□□□ 0.87
LRPPRC-205ENST00000447246 ZNF219Q9P2Y4 722 aaPredicted RBP20.46■□□□□ 0.87
LRPPRC-205ENST00000447246 ADAMTS7Q9UKP4 1686 aa20.45■□□□□ 0.86
LRPPRC-205ENST00000447246 TM4SF1P30408 202 aa20.45■□□□□ 0.86
LRPPRC-205ENST00000447246 CRKLP46109 303 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms