RNA–Protein interactions for RNA: ENST00000446015.6

AP1S3-208, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene AP1S3, Length 499 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-208ENST00000446015 TREML4Q6UXN2 200 aa7.33□□□□□ -1.24
AP1S3-208ENST00000446015 SIX5Q8N196 739 aa7.33□□□□□ -1.24
AP1S3-208ENST00000446015 DEPDC4Q8N2C3 294 aa7.33□□□□□ -1.24
AP1S3-208ENST00000446015 RHBDD1Q8TEB9 315 aa7.33□□□□□ -1.24
AP1S3-208ENST00000446015 SLC4A9Q96Q91 983 aa7.33□□□□□ -1.24
AP1S3-208ENST00000446015 TIMELESSQ9UNS1 1208 aa7.33□□□□□ -1.24
AP1S3-208ENST00000446015 SOBPA7XYQ1 873 aa7.32□□□□□ -1.24
AP1S3-208ENST00000446015 H7C1W4 665 aa7.32□□□□□ -1.24
AP1S3-208ENST00000446015 VSIG8P0DPA2 414 aa7.32□□□□□ -1.24
AP1S3-208ENST00000446015 SMTNP53814 917 aa7.32□□□□□ -1.24
AP1S3-208ENST00000446015 NBPF10Q6P3W6 841 aaKnown RBP7.32□□□□□ -1.24
AP1S3-208ENST00000446015 PRICKLE2Q7Z3G6 844 aa7.32□□□□□ -1.24
AP1S3-208ENST00000446015 CCDC155Q8N6L0 562 aa7.32□□□□□ -1.24
AP1S3-208ENST00000446015 FHDC1Q9C0D6 1143 aaPredicted RBP7.32□□□□□ -1.24
AP1S3-208ENST00000446015 DYRK1BQ9Y463 629 aa7.32□□□□□ -1.24
AP1S3-208ENST00000446015 A0A1B0GTH6 734 aa7.31□□□□□ -1.24
AP1S3-208ENST00000446015 FAM196BA6NMK8 535 aa7.31□□□□□ -1.24
AP1S3-208ENST00000446015 PPFIA3O75145 1194 aa7.31□□□□□ -1.24
AP1S3-208ENST00000446015 NFX1Q12986 1120 aaKnown RBP7.31□□□□□ -1.24
AP1S3-208ENST00000446015 MTFR1Q15390 333 aa7.31□□□□□ -1.24
AP1S3-208ENST00000446015 PPARGC1BQ86YN6 1023 aaKnown RBP7.31□□□□□ -1.24
AP1S3-208ENST00000446015 OGFOD1Q8N543 542 aa7.31□□□□□ -1.24
AP1S3-208ENST00000446015 C1orf216Q8TAB5 229 aa7.31□□□□□ -1.24
AP1S3-208ENST00000446015 VRTNQ9H8Y1 702 aa7.31□□□□□ -1.24
AP1S3-208ENST00000446015 A6NJY4 79 aa7.3□□□□□ -1.24
AP1S3-208ENST00000446015 TMEM229AB2RXF0 380 aa7.3□□□□□ -1.24
AP1S3-208ENST00000446015 ITGA6P23229 1130 aa7.3□□□□□ -1.24
AP1S3-208ENST00000446015 LMOD1P29536 600 aaPredicted RBP7.3□□□□□ -1.24
AP1S3-208ENST00000446015 LBRQ14739 615 aaKnown RBP7.3□□□□□ -1.24
AP1S3-208ENST00000446015 CCDC102BQ68D86 513 aa7.3□□□□□ -1.24
AP1S3-208ENST00000446015 TPCN2Q8NHX9 752 aa7.3□□□□□ -1.24
AP1S3-208ENST00000446015 NIFKQ9BYG3 293 aaKnown RBP7.3□□□□□ -1.24
AP1S3-208ENST00000446015 TIMMDC1Q9NPL8 285 aa7.3□□□□□ -1.24
AP1S3-208ENST00000446015 CHMP3Q9Y3E7 222 aa7.3□□□□□ -1.24
AP1S3-208ENST00000446015 CDK2AP1O14519 115 aa7.29□□□□□ -1.24
AP1S3-208ENST00000446015 RASA1P20936 1047 aa7.29□□□□□ -1.24
AP1S3-208ENST00000446015 NANOS1Q8WY41 292 aaKnown RBP7.29□□□□□ -1.24
AP1S3-208ENST00000446015 SEC13P55735 322 aa7.28□□□□□ -1.24
AP1S3-208ENST00000446015 CLDN10P78369 228 aa7.28□□□□□ -1.24
AP1S3-208ENST00000446015 NBPF1Q3BBV0 1214 aa7.28□□□□□ -1.24
AP1S3-208ENST00000446015 CFAP70Q5T0N1 1121 aa7.28□□□□□ -1.24
AP1S3-208ENST00000446015 FOXR1Q6PIV2 292 aa7.28□□□□□ -1.24
AP1S3-208ENST00000446015 ZNF358Q9NW07 568 aa7.28□□□□□ -1.24
AP1S3-208ENST00000446015 SENP3-EIF4A1A0A087X0R7 540 aa7.27□□□□□ -1.25
AP1S3-208ENST00000446015 POU4F2Q12837 409 aa7.27□□□□□ -1.25
AP1S3-208ENST00000446015 GAS2L2Q8NHY3 880 aa7.27□□□□□ -1.25
AP1S3-208ENST00000446015 USP17L15C9J2P7 530 aa7.26□□□□□ -1.25
AP1S3-208ENST00000446015 USP17L10C9JJH3 530 aa7.26□□□□□ -1.25
AP1S3-208ENST00000446015 USP17L13C9JLJ4 530 aa7.26□□□□□ -1.25
AP1S3-208ENST00000446015 USP17L12C9JPN9 530 aa7.26□□□□□ -1.25
AP1S3-208ENST00000446015 USP17L11C9JVI0 530 aa7.26□□□□□ -1.25
AP1S3-208ENST00000446015 USP17L21D6R901 530 aa7.26□□□□□ -1.25
AP1S3-208ENST00000446015 USP17L18D6R9N7 530 aa7.26□□□□□ -1.25
AP1S3-208ENST00000446015 USP17L22D6RA61 530 aa7.26□□□□□ -1.25
AP1S3-208ENST00000446015 USP17L17D6RBQ6 530 aa7.26□□□□□ -1.25
AP1S3-208ENST00000446015 USP17L19D6RCP7 530 aa7.26□□□□□ -1.25
AP1S3-208ENST00000446015 USP17L20D6RJB6 530 aa7.26□□□□□ -1.25
AP1S3-208ENST00000446015 WIPF1O43516 503 aa7.26□□□□□ -1.25
AP1S3-208ENST00000446015 F11P03951 625 aa7.26□□□□□ -1.25
AP1S3-208ENST00000446015 CSB-PGBD3P0DP91 1061 aa7.26□□□□□ -1.25
AP1S3-208ENST00000446015 USP17L24Q0WX57 530 aa7.26□□□□□ -1.25
AP1S3-208ENST00000446015 C4orf17Q53FE4 359 aa7.26□□□□□ -1.25
AP1S3-208ENST00000446015 KANK4Q5T7N3 995 aaPredicted RBP7.26□□□□□ -1.25
AP1S3-208ENST00000446015 SV2AQ7L0J3 742 aa7.26□□□□□ -1.25
AP1S3-208ENST00000446015 TRIM22Q8IYM9 498 aa7.26□□□□□ -1.25
AP1S3-208ENST00000446015 PGBD3Q8N328 593 aa7.26□□□□□ -1.25
AP1S3-208ENST00000446015 ZDHHC3Q9NYG2 299 aa7.26□□□□□ -1.25
AP1S3-208ENST00000446015 SCHIP1Q9P0W5 487 aaPredicted RBP7.26□□□□□ -1.25
AP1S3-208ENST00000446015 SERTAD1Q9UHV2 236 aa7.26□□□□□ -1.25
AP1S3-208ENST00000446015 GPC6Q9Y625 555 aaPredicted RBP7.26□□□□□ -1.25
AP1S3-208ENST00000446015 ZBTB7BO15156 539 aaPredicted RBP7.25□□□□□ -1.25
AP1S3-208ENST00000446015 RHOQP17081 205 aa7.25□□□□□ -1.25
AP1S3-208ENST00000446015 TATP17735 454 aaPredicted RBP7.25□□□□□ -1.25
AP1S3-208ENST00000446015 PTK7Q13308 1070 aa7.25□□□□□ -1.25
AP1S3-208ENST00000446015 ELOAQ14241 798 aaKnown RBP7.25□□□□□ -1.25
AP1S3-208ENST00000446015 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.25□□□□□ -1.25
AP1S3-208ENST00000446015 ZNF594Q96JF6 807 aaPredicted RBP7.25□□□□□ -1.25
AP1S3-208ENST00000446015 IQSEC3Q9UPP2 1182 aaPredicted RBP7.25□□□□□ -1.25
AP1S3-208ENST00000446015 PLA2G4AP47712 749 aa7.24□□□□□ -1.25
AP1S3-208ENST00000446015 PSMA6P60900 246 aaKnown RBP7.24□□□□□ -1.25
AP1S3-208ENST00000446015 INSM1Q01101 510 aaPredicted RBP7.24□□□□□ -1.25
AP1S3-208ENST00000446015 EFHC2Q5JST6 749 aa7.24□□□□□ -1.25
AP1S3-208ENST00000446015 ANKMY2Q8IV38 441 aa7.24□□□□□ -1.25
AP1S3-208ENST00000446015 PBXIP1Q96AQ6 731 aa7.24□□□□□ -1.25
AP1S3-208ENST00000446015 TRERF1Q96PN7 1200 aa7.24□□□□□ -1.25
AP1S3-208ENST00000446015 KIAA1024Q9UPX6 916 aa7.24□□□□□ -1.25
AP1S3-208ENST00000446015 CDC14CA4D256 554 aa7.23□□□□□ -1.25
AP1S3-208ENST00000446015 PPP1R15AO75807 674 aaPredicted RBP7.23□□□□□ -1.25
AP1S3-208ENST00000446015 RFX1P22670 979 aa7.23□□□□□ -1.25
AP1S3-208ENST00000446015 EPHA4P54764 986 aa7.23□□□□□ -1.25
AP1S3-208ENST00000446015 FOXK2Q01167 660 aa7.23□□□□□ -1.25
AP1S3-208ENST00000446015 TEAD4Q15561 434 aa7.23□□□□□ -1.25
AP1S3-208ENST00000446015 LCE2AQ5TA79 106 aaPredicted RBP7.23□□□□□ -1.25
AP1S3-208ENST00000446015 FIGNL1Q6PIW4 674 aa7.23□□□□□ -1.25
AP1S3-208ENST00000446015 RIPOR1Q6ZS17 1223 aa7.23□□□□□ -1.25
AP1S3-208ENST00000446015 GAS2L1Q99501 681 aaPredicted RBP7.23□□□□□ -1.25
AP1S3-208ENST00000446015 CABP1Q9NZU7 370 aa7.23□□□□□ -1.25
AP1S3-208ENST00000446015 PHF24Q9UPV7 400 aa7.23□□□□□ -1.25
AP1S3-208ENST00000446015 STAU1O95793 577 aaKnown RBP7.22□□□□□ -1.25
AP1S3-208ENST00000446015 VEGFBP49765 207 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms