RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 DDX46Q7L014 1031 aaKnown RBP13.22□□□□□ -0.29
FN1-211ENST00000443816 TMEM87AQ8NBN3 555 aa13.22□□□□□ -0.29
FN1-211ENST00000443816 CUL5Q93034 780 aa13.22□□□□□ -0.29
FN1-211ENST00000443816 TRMT112Q9UI30 125 aaKnown RBP13.22□□□□□ -0.29
FN1-211ENST00000443816 CCDC196A0A1B0GTZ2 297 aa13.21□□□□□ -0.29
FN1-211ENST00000443816 WDR97A6NE52 1622 aa13.21□□□□□ -0.29
FN1-211ENST00000443816 MAP4K4O95819 1239 aaPredicted RBP13.21□□□□□ -0.29
FN1-211ENST00000443816 ZNF444Q8N0Y2 327 aaPredicted RBP13.21□□□□□ -0.29
FN1-211ENST00000443816 ABCC11Q96J66 1382 aa13.21□□□□□ -0.29
FN1-211ENST00000443816 BRPF1P55201 1214 aaPredicted RBP13.21□□□□□ -0.29
FN1-211ENST00000443816 ZNF518AQ6AHZ1 1483 aa13.21□□□□□ -0.29
FN1-211ENST00000443816 KIF1BO60333 1816 aa13.21□□□□□ -0.29
FN1-211ENST00000443816 BCAR3O75815 825 aa13.21□□□□□ -0.3
FN1-211ENST00000443816 MYD88Q99836 296 aa13.21□□□□□ -0.3
FN1-211ENST00000443816 MYO5CQ9NQX4 1742 aa13.21□□□□□ -0.3
FN1-211ENST00000443816 ME1P48163 572 aa13.2□□□□□ -0.3
FN1-211ENST00000443816 CCDC85AQ96PX6 553 aaPredicted RBP13.2□□□□□ -0.3
FN1-211ENST00000443816 PPP1R12BO60237 982 aaPredicted RBP13.2□□□□□ -0.3
FN1-211ENST00000443816 NAPBQ9H115 298 aa13.2□□□□□ -0.3
FN1-211ENST00000443816 STK3Q13188 491 aa13.2□□□□□ -0.3
FN1-211ENST00000443816 CHD1LQ86WJ1 897 aa13.2□□□□□ -0.3
FN1-211ENST00000443816 C16orf71Q8IYS4 520 aaPredicted RBP13.2□□□□□ -0.3
FN1-211ENST00000443816 CEP57L1Q8IYX8 460 aa13.2□□□□□ -0.3
FN1-211ENST00000443816 TANGO6Q9C0B7 1094 aa13.2□□□□□ -0.3
FN1-211ENST00000443816 NSD2O96028 1365 aa13.2□□□□□ -0.3
FN1-211ENST00000443816 CEBPZQ03701 1054 aaKnown RBP13.2□□□□□ -0.3
FN1-211ENST00000443816 ERCC4Q92889 916 aaPredicted RBP13.2□□□□□ -0.3
FN1-211ENST00000443816 DEF6Q9H4E7 631 aa13.2□□□□□ -0.3
FN1-211ENST00000443816 ABCC5O15440 1437 aa13.2□□□□□ -0.3
FN1-211ENST00000443816 POTEJP0CG39 1038 aa13.2□□□□□ -0.3
FN1-211ENST00000443816 ZRSR2Q15696 482 aaKnown RBP13.2□□□□□ -0.3
FN1-211ENST00000443816 CWC27Q6UX04 472 aaKnown RBP13.19□□□□□ -0.3
FN1-211ENST00000443816 IQCA1Q86XH1 822 aa13.19□□□□□ -0.3
FN1-211ENST00000443816 NPHP3Q7Z494 1330 aa13.19□□□□□ -0.3
FN1-211ENST00000443816 DHX29Q7Z478 1369 aaKnown RBP13.19□□□□□ -0.3
FN1-211ENST00000443816 SPTY2D1Q68D10 685 aaPredicted RBP13.19□□□□□ -0.3
FN1-211ENST00000443816 CEBPAP49715 358 aaPredicted RBP13.19□□□□□ -0.3
FN1-211ENST00000443816 HSP90B2PQ58FF3 399 aa13.19□□□□□ -0.3
FN1-211ENST00000443816 PDZRN3Q9UPQ7 1066 aa13.19□□□□□ -0.3
FN1-211ENST00000443816 TRIM5Q9C035 493 aa13.19□□□□□ -0.3
FN1-211ENST00000443816 IFNL2Q8IZJ0 200 aa13.19□□□□□ -0.3
FN1-211ENST00000443816 NAIPQ13075 1403 aa13.19□□□□□ -0.3
FN1-211ENST00000443816 WDR33Q9C0J8 1336 aaKnown RBP13.19□□□□□ -0.3
FN1-211ENST00000443816 MINDY4BA8MYZ0 360 aa13.19□□□□□ -0.3
FN1-211ENST00000443816 C6orf229H3BNL8 230 aa13.19□□□□□ -0.3
FN1-211ENST00000443816 KRT85P78386 507 aa13.18□□□□□ -0.3
FN1-211ENST00000443816 ANKRD18AQ8IVF6 992 aa13.18□□□□□ -0.3
FN1-211ENST00000443816 BAG3O95817 575 aa13.18□□□□□ -0.3
FN1-211ENST00000443816 RPAP2Q8IXW5 612 aaPredicted RBP13.18□□□□□ -0.3
FN1-211ENST00000443816 UHRF1BP1LA0JNW5 1464 aa13.18□□□□□ -0.3
FN1-211ENST00000443816 PPFIBP1Q86W92 1011 aa13.18□□□□□ -0.3
FN1-211ENST00000443816 DBF4Q9UBU7 674 aaPredicted RBP13.18□□□□□ -0.3
FN1-211ENST00000443816 ASXL2Q76L83 1435 aa13.18□□□□□ -0.3
FN1-211ENST00000443816 SCLT1Q96NL6 688 aa13.18□□□□□ -0.3
FN1-211ENST00000443816 GLRX3O76003 335 aaKnown RBP13.18□□□□□ -0.3
FN1-211ENST00000443816 SSBP05455 408 aaKnown RBP eCLIP13.18□□□□□ -0.3
FN1-211ENST00000443816 IDI1Q13907 227 aa13.18□□□□□ -0.3
FN1-211ENST00000443816 ZSCAN31Q96LW9 406 aaPredicted RBP13.18□□□□□ -0.3
FN1-211ENST00000443816 NEBLO76041 1014 aa13.18□□□□□ -0.3
FN1-211ENST00000443816 DCTN1Q14203 1278 aa13.18□□□□□ -0.3
FN1-211ENST00000443816 WDR78Q5VTH9 848 aa13.18□□□□□ -0.3
FN1-211ENST00000443816 TTLL5Q6EMB2 1281 aa13.18□□□□□ -0.3
FN1-211ENST00000443816 RAB34Q9BZG1 259 aa13.18□□□□□ -0.3
FN1-211ENST00000443816 TTF1Q15361 905 aaPredicted RBP13.17□□□□□ -0.3
FN1-211ENST00000443816 SCAF11Q99590 1463 aaKnown RBP13.17□□□□□ -0.3
FN1-211ENST00000443816 SPDYE4A6NLX3 237 aa13.17□□□□□ -0.3
FN1-211ENST00000443816 LARP1BQ659C4 914 aaKnown RBP13.17□□□□□ -0.3
FN1-211ENST00000443816 CCDC150Q8NCX0 1101 aa13.17□□□□□ -0.3
FN1-211ENST00000443816 RNF41Q9H4P4 317 aaPredicted RBP13.17□□□□□ -0.3
FN1-211ENST00000443816 ZNF622Q969S3 477 aaKnown RBP eCLIP13.17□□□□□ -0.3
FN1-211ENST00000443816 SERPINC1P01008 464 aa13.17□□□□□ -0.3
FN1-211ENST00000443816 MCM10Q7L590 875 aa13.17□□□□□ -0.3
FN1-211ENST00000443816 CDCA7LQ96GN5 454 aa13.17□□□□□ -0.3
FN1-211ENST00000443816 TSHZ2Q9NRE2 1034 aa13.17□□□□□ -0.3
FN1-211ENST00000443816 ADGBQ8N7X0 1667 aa13.17□□□□□ -0.3
FN1-211ENST00000443816 PDRG1Q9NUG6 133 aa13.17□□□□□ -0.3
FN1-211ENST00000443816 PTPRCP08575 1304 aa13.17□□□□□ -0.3
FN1-211ENST00000443816 FBXO31Q5XUX0 539 aaPredicted RBP13.16□□□□□ -0.3
FN1-211ENST00000443816 CWC25Q9NXE8 425 aaPredicted RBP13.16□□□□□ -0.3
FN1-211ENST00000443816 WDR7Q9Y4E6 1490 aa13.16□□□□□ -0.3
FN1-211ENST00000443816 CCDC96Q2M329 555 aa13.16□□□□□ -0.3
FN1-211ENST00000443816 ALDH1L2Q3SY69 923 aa13.16□□□□□ -0.3
FN1-211ENST00000443816 CCDC39Q9UFE4 941 aa13.16□□□□□ -0.3
FN1-211ENST00000443816 USHBP1Q8N6Y0 703 aa13.16□□□□□ -0.3
FN1-211ENST00000443816 FEZ1Q99689 392 aa13.16□□□□□ -0.3
FN1-211ENST00000443816 MIS18AQ9NYP9 233 aa13.16□□□□□ -0.3
FN1-211ENST00000443816 NOS1P29475 1434 aa13.16□□□□□ -0.3
FN1-211ENST00000443816 HLA-DOAP06340 250 aa13.16□□□□□ -0.3
FN1-211ENST00000443816 LDHCP07864 332 aa13.16□□□□□ -0.3
FN1-211ENST00000443816 SEPT7Q16181 437 aaKnown RBP13.16□□□□□ -0.3
FN1-211ENST00000443816 PATL2C9JE40 543 aaKnown RBP13.16□□□□□ -0.3
FN1-211ENST00000443816 HMGB1P09429 215 aaKnown RBP13.16□□□□□ -0.3
FN1-211ENST00000443816 SMARCC1Q92922 1105 aaPredicted RBP13.16□□□□□ -0.3
FN1-211ENST00000443816 A2MP01023 1474 aa13.15□□□□□ -0.3
FN1-211ENST00000443816 TSPY26PQ9H489 355 aa13.15□□□□□ -0.3
FN1-211ENST00000443816 NASPP49321 788 aaPredicted RBP13.15□□□□□ -0.3
FN1-211ENST00000443816 CCDC192P0DO97 292 aa13.15□□□□□ -0.3
FN1-211ENST00000443816 CBFA2T2O43439 604 aa13.15□□□□□ -0.3
FN1-211ENST00000443816 ZGPATQ8N5A5 531 aaKnown RBP13.15□□□□□ -0.3
FN1-211ENST00000443816 CTCFLQ8NI51 663 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms