RNA–Protein interactions for RNA: ENST00000440234.6

RBM38-205, Transcript of RNA binding motif protein 38, humanhuman

TSL 2 BASIC

Gene RBM38, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-205ENST00000440234 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.91■■■□□ 2.38
RBM38-205ENST00000440234 AEBP1Q8IUX7 1158 aa29.91■■■□□ 2.38
RBM38-205ENST00000440234 C4BP0C0L5 1744 aa29.91■■■□□ 2.38
RBM38-205ENST00000440234 NPC1L1Q9UHC9 1359 aa29.9■■■□□ 2.38
RBM38-205ENST00000440234 PHF14O94880 888 aa29.9■■■□□ 2.38
RBM38-205ENST00000440234 SSFA2P28290 1259 aa29.9■■■□□ 2.38
RBM38-205ENST00000440234 ZNF530Q6P9A1 599 aaPredicted RBP29.9■■■□□ 2.38
RBM38-205ENST00000440234 SMIM5Q71RC9 77 aa29.9■■■□□ 2.38
RBM38-205ENST00000440234 PELP1Q8IZL8 1130 aaKnown RBP29.9■■■□□ 2.38
RBM38-205ENST00000440234 ZNF784Q8NCA9 323 aaPredicted RBP29.9■■■□□ 2.38
RBM38-205ENST00000440234 IL13P35225 146 aa29.88■■■□□ 2.37
RBM38-205ENST00000440234 SULT6B1Q6IMI4 303 aa29.88■■■□□ 2.37
RBM38-205ENST00000440234 CD2APQ9Y5K6 639 aa29.88■■■□□ 2.37
RBM38-205ENST00000440234 CC2D1BQ5T0F9 858 aaKnown RBP29.86■■■□□ 2.37
RBM38-205ENST00000440234 GNPATO15228 680 aa29.85■■■□□ 2.37
RBM38-205ENST00000440234 MTHFSP49914 203 aa29.85■■■□□ 2.37
RBM38-205ENST00000440234 CABP4P57796 275 aa29.85■■■□□ 2.37
RBM38-205ENST00000440234 C1orf141Q5JVX7 400 aa29.84■■■□□ 2.37
RBM38-205ENST00000440234 KDRP35968 1356 aa29.83■■■□□ 2.37
RBM38-205ENST00000440234 CNGB1Q14028 1251 aaPredicted RBP29.83■■■□□ 2.37
RBM38-205ENST00000440234 SLC4A9Q96Q91 983 aa29.83■■■□□ 2.37
RBM38-205ENST00000440234 RBM42Q9BTD8 480 aaKnown RBP29.83■■■□□ 2.37
RBM38-205ENST00000440234 KDM6AO15550 1401 aaPredicted RBP29.81■■■□□ 2.36
RBM38-205ENST00000440234 GRIN3BO60391 1043 aa29.81■■■□□ 2.36
RBM38-205ENST00000440234 YBX3P16989 372 aaKnown RBP eCLIP29.81■■■□□ 2.361e-7■□□□□ 8.2
RBM38-205ENST00000440234 UBR3Q6ZT12 1888 aa29.8■■■□□ 2.36
RBM38-205ENST00000440234 CHD4Q14839 1912 aa29.79■■■□□ 2.36
RBM38-205ENST00000440234 RC3H1Q5TC82 1133 aaKnown RBP29.78■■■□□ 2.36
RBM38-205ENST00000440234 NFATC2IPQ8NCF5 419 aa29.78■■■□□ 2.36
RBM38-205ENST00000440234 RTCBQ9Y3I0 505 aaKnown RBP29.78■■■□□ 2.36
RBM38-205ENST00000440234 TRAPPC3LQ5T215 181 aa29.77■■■□□ 2.36
RBM38-205ENST00000440234 AKAP4Q5JQC9 854 aa29.73■■■□□ 2.35
RBM38-205ENST00000440234 PTCD1O75127 700 aaKnown RBP29.72■■■□□ 2.35
RBM38-205ENST00000440234 RPS6KA4O75676 772 aa29.72■■■□□ 2.35
RBM38-205ENST00000440234 CNTNAP4Q9C0A0 1308 aa29.71■■■□□ 2.35
RBM38-205ENST00000440234 DIAPH1O60610 1272 aaKnown RBP29.71■■■□□ 2.35
RBM38-205ENST00000440234 HMOX1P09601 288 aa29.71■■■□□ 2.35
RBM38-205ENST00000440234 ADRA2BP18089 450 aa29.71■■■□□ 2.35
RBM38-205ENST00000440234 ARHGEF1Q92888 912 aaKnown RBP29.71■■■□□ 2.35
RBM38-205ENST00000440234 GOLGB1Q14789 3259 aaKnown RBP29.7■■■□□ 2.35
RBM38-205ENST00000440234 NLGN1Q8N2Q7 840 aa29.7■■■□□ 2.35
RBM38-205ENST00000440234 MMP10P09238 476 aa29.69■■■□□ 2.34
RBM38-205ENST00000440234 RALBP1Q15311 655 aa29.68■■■□□ 2.34
RBM38-205ENST00000440234 LGR6Q9HBX8 967 aa29.68■■■□□ 2.34
RBM38-205ENST00000440234 ZNF831Q5JPB2 1677 aa29.68■■■□□ 2.34
RBM38-205ENST00000440234 RFC4P35249 363 aa29.67■■■□□ 2.34
RBM38-205ENST00000440234 SLC52A2Q9HAB3 445 aa29.66■■■□□ 2.34
RBM38-205ENST00000440234 RNMTO43148 476 aaKnown RBP29.64■■■□□ 2.34
RBM38-205ENST00000440234 ANP32CO43423 234 aa29.64■■■□□ 2.34
RBM38-205ENST00000440234 CRKLP46109 303 aaKnown RBP29.64■■■□□ 2.34
RBM38-205ENST00000440234 GYS1P13807 737 aa29.63■■■□□ 2.33
RBM38-205ENST00000440234 MTHFSDQ2M296 383 aaKnown RBP29.63■■■□□ 2.33
RBM38-205ENST00000440234 PRKRIP1Q9H875 184 aaPredicted RBP29.62■■■□□ 2.33
RBM38-205ENST00000440234 PPP2R1AP30153 589 aa29.59■■■□□ 2.33
RBM38-205ENST00000440234 C1QTNF8P60827 252 aa29.59■■■□□ 2.33
RBM38-205ENST00000440234 WWC3Q9ULE0 1092 aa29.59■■■□□ 2.33
RBM38-205ENST00000440234 COL5A3P25940 1745 aaPredicted RBP29.59■■■□□ 2.33
RBM38-205ENST00000440234 TGFB2P61812 414 aa29.58■■■□□ 2.33
RBM38-205ENST00000440234 DIEXFQ68CQ4 756 aaKnown RBP29.58■■■□□ 2.33
RBM38-205ENST00000440234 INTS5Q6P9B9 1019 aaKnown RBP29.58■■■□□ 2.33
RBM38-205ENST00000440234 MYBBP1AQ9BQG0 1328 aaKnown RBP29.57■■■□□ 2.32
RBM38-205ENST00000440234 SCN11AQ9UI33 1791 aa29.57■■■□□ 2.32
RBM38-205ENST00000440234 MYH14Q7Z406 1995 aaKnown RBP29.56■■■□□ 2.32
RBM38-205ENST00000440234 U2SURPO15042 1029 aaKnown RBP29.56■■■□□ 2.32
RBM38-205ENST00000440234 SLC39A6Q13433 755 aa29.56■■■□□ 2.32
RBM38-205ENST00000440234 DNAJC10Q8IXB1 793 aa29.56■■■□□ 2.32
RBM38-205ENST00000440234 PARP3Q9Y6F1 533 aa29.56■■■□□ 2.32
RBM38-205ENST00000440234 CCDC87Q9NVE4 849 aa29.55■■■□□ 2.32
RBM38-205ENST00000440234 GIGYF1O75420 1035 aaPredicted RBP29.54■■■□□ 2.32
RBM38-205ENST00000440234 SRP68Q9UHB9 627 aaKnown RBP29.54■■■□□ 2.32
RBM38-205ENST00000440234 COL3A1P02461 1466 aaPredicted RBP29.53■■■□□ 2.32
RBM38-205ENST00000440234 USP42Q9H9J4 1324 aaKnown RBP29.52■■■□□ 2.32
RBM38-205ENST00000440234 MRC1P22897 1456 aa29.51■■■□□ 2.31
RBM38-205ENST00000440234 A0A0G2JLW4 131 aa29.51■■■□□ 2.31
RBM38-205ENST00000440234 CYP19A1P11511 503 aaPredicted RBP29.51■■■□□ 2.31
RBM38-205ENST00000440234 FKBP8Q14318 412 aa29.51■■■□□ 2.31
RBM38-205ENST00000440234 CFAP53Q96M91 514 aa29.51■■■□□ 2.31
RBM38-205ENST00000440234 CICQ96RK0 1608 aaPredicted RBP29.51■■■□□ 2.31
RBM38-205ENST00000440234 PXDNLA1KZ92 1463 aa29.5■■■□□ 2.31
RBM38-205ENST00000440234 C10orf71Q711Q0 1435 aa29.5■■■□□ 2.31
RBM38-205ENST00000440234 ATP10DQ9P241 1426 aa29.49■■■□□ 2.31
RBM38-205ENST00000440234 GAS2L2Q8NHY3 880 aa29.49■■■□□ 2.31
RBM38-205ENST00000440234 VSIG10Q8N0Z9 540 aa29.48■■■□□ 2.31
RBM38-205ENST00000440234 TJP1Q07157 1748 aa29.48■■■□□ 2.31
RBM38-205ENST00000440234 GNAT3A8MTJ3 354 aa29.47■■■□□ 2.31
RBM38-205ENST00000440234 DPEP1P16444 411 aa29.47■■■□□ 2.31
RBM38-205ENST00000440234 IL17REQ8NFR9 667 aa29.47■■■□□ 2.31
RBM38-205ENST00000440234 SOS1Q07889 1333 aaPredicted RBP29.46■■■□□ 2.31
RBM38-205ENST00000440234 ZPR1O75312 459 aa29.46■■■□□ 2.31
RBM38-205ENST00000440234 BCS1LQ9Y276 419 aa29.46■■■□□ 2.31
RBM38-205ENST00000440234 TM4SF1P30408 202 aa29.45■■■□□ 2.31
RBM38-205ENST00000440234 DDR1Q08345 913 aa29.45■■■□□ 2.31
RBM38-205ENST00000440234 C4AP0C0L4 1744 aa29.45■■■□□ 2.3
RBM38-205ENST00000440234 ADAMTS7Q9UKP4 1686 aa29.44■■■□□ 2.3
RBM38-205ENST00000440234 ADCY9O60503 1353 aa29.44■■■□□ 2.3
RBM38-205ENST00000440234 SENP3-EIF4A1A0A087X0R7 540 aa29.44■■■□□ 2.3
RBM38-205ENST00000440234 TTC5Q8N0Z6 440 aa29.44■■■□□ 2.3
RBM38-205ENST00000440234 KCPQ6ZWJ8 1503 aa29.44■■■□□ 2.3
RBM38-205ENST00000440234 KIF13BQ9NQT8 1826 aa29.43■■■□□ 2.3
RBM38-205ENST00000440234 KCNA3P22001 575 aa29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms