RNA–Protein interactions for RNA: ENST00000440081.2

TNRC18-207, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 3

Gene TNRC18, Length 757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-207ENST00000440081 ATG3Q9NT62 314 aa15.41■□□□□ 0.06
TNRC18-207ENST00000440081 CICQ96RK0 1608 aaPredicted RBP15.4■□□□□ 0.06
TNRC18-207ENST00000440081 POLKQ9UBT6 870 aa15.4■□□□□ 0.06
TNRC18-207ENST00000440081 KIF13BQ9NQT8 1826 aa15.39■□□□□ 0.05
TNRC18-207ENST00000440081 MMP10P09238 476 aa15.39■□□□□ 0.05
TNRC18-207ENST00000440081 KDRP35968 1356 aa15.38■□□□□ 0.05
TNRC18-207ENST00000440081 KIAA1551Q9HCM1 1747 aa15.38■□□□□ 0.05
TNRC18-207ENST00000440081 PXDNLA1KZ92 1463 aa15.38■□□□□ 0.05
TNRC18-207ENST00000440081 PLEKHG2Q9H7P9 1386 aa15.37■□□□□ 0.05
TNRC18-207ENST00000440081 KIF3CO14782 793 aa15.37■□□□□ 0.05
TNRC18-207ENST00000440081 EIF4A2Q14240 407 aaKnown RBP15.37■□□□□ 0.05
TNRC18-207ENST00000440081 ZNF831Q5JPB2 1677 aa15.37■□□□□ 0.05
TNRC18-207ENST00000440081 TRAPPC3LQ5T215 181 aa15.36■□□□□ 0.05
TNRC18-207ENST00000440081 RTCBQ9Y3I0 505 aaKnown RBP15.36■□□□□ 0.05
TNRC18-207ENST00000440081 N4BP2Q86UW6 1770 aaPredicted RBP15.36■□□□□ 0.05
TNRC18-207ENST00000440081 COL5A3P25940 1745 aaPredicted RBP15.35■□□□□ 0.05
TNRC18-207ENST00000440081 TGFB2P61812 414 aa15.35■□□□□ 0.05
TNRC18-207ENST00000440081 NLGN1Q8N2Q7 840 aa15.35■□□□□ 0.05
TNRC18-207ENST00000440081 SLC4A9Q96Q91 983 aa15.35■□□□□ 0.05
TNRC18-207ENST00000440081 C10orf71Q711Q0 1435 aa15.34■□□□□ 0.05
TNRC18-207ENST00000440081 ERVV-2B6SEH9 535 aa15.34■□□□□ 0.05
TNRC18-207ENST00000440081 TNNT2P45379 298 aaPredicted RBP15.34■□□□□ 0.05
TNRC18-207ENST00000440081 A0A0G2JLW4 131 aa15.33■□□□□ 0.04
TNRC18-207ENST00000440081 HSP90AB1P08238 724 aaKnown RBP15.33■□□□□ 0.04
TNRC18-207ENST00000440081 ADRA2BP18089 450 aa15.33■□□□□ 0.04
TNRC18-207ENST00000440081 RC3H1Q5TC82 1133 aaKnown RBP15.33■□□□□ 0.04
TNRC18-207ENST00000440081 ARHGEF1Q92888 912 aaKnown RBP15.33■□□□□ 0.04
TNRC18-207ENST00000440081 RBM42Q9BTD8 480 aaKnown RBP15.33■□□□□ 0.04
TNRC18-207ENST00000440081 BCS1LQ9Y276 419 aa15.33■□□□□ 0.04
TNRC18-207ENST00000440081 C4AP0C0L4 1744 aa15.33■□□□□ 0.04
TNRC18-207ENST00000440081 CNTNAP4Q9C0A0 1308 aa15.33■□□□□ 0.04
TNRC18-207ENST00000440081 DCAF5Q96JK2 942 aa15.32■□□□□ 0.04
TNRC18-207ENST00000440081 POLR3GLQ9BT43 218 aa15.32■□□□□ 0.04
TNRC18-207ENST00000440081 CCDC87Q9NVE4 849 aa15.32■□□□□ 0.04
TNRC18-207ENST00000440081 BRCA1P38398 1863 aaKnown RBP15.31■□□□□ 0.04
TNRC18-207ENST00000440081 MYH14Q7Z406 1995 aaKnown RBP15.31■□□□□ 0.04
TNRC18-207ENST00000440081 RPS6KA4O75676 772 aa15.31■□□□□ 0.04
TNRC18-207ENST00000440081 GYS1P13807 737 aa15.31■□□□□ 0.04
TNRC18-207ENST00000440081 PLEKHO1Q53GL0 409 aaPredicted RBP15.31■□□□□ 0.04
TNRC18-207ENST00000440081 KDM6AO15550 1401 aaPredicted RBP15.31■□□□□ 0.04
TNRC18-207ENST00000440081 DPEP1P16444 411 aa15.3■□□□□ 0.04
TNRC18-207ENST00000440081 RFC4P35249 363 aa15.3■□□□□ 0.04
TNRC18-207ENST00000440081 TIMELESSQ9UNS1 1208 aa15.3■□□□□ 0.04
TNRC18-207ENST00000440081 CABP4P57796 275 aa15.29■□□□□ 0.04
TNRC18-207ENST00000440081 ZNF530Q6P9A1 599 aaPredicted RBP15.29■□□□□ 0.04
TNRC18-207ENST00000440081 ARHGAP27Q6ZUM4 889 aa15.29■□□□□ 0.04
TNRC18-207ENST00000440081 PARP3Q9Y6F1 533 aa15.29■□□□□ 0.04
TNRC18-207ENST00000440081 TOMM70O94826 608 aa15.28■□□□□ 0.04
TNRC18-207ENST00000440081 FCHSD2O94868 740 aa15.28■□□□□ 0.04
TNRC18-207ENST00000440081 APLP1P51693 650 aa15.28■□□□□ 0.04
TNRC18-207ENST00000440081 AMOTQ4VCS5 1084 aa15.28■□□□□ 0.04
TNRC18-207ENST00000440081 ARFGEF1Q9Y6D6 1849 aa15.27■□□□□ 0.04
TNRC18-207ENST00000440081 PTCD1O75127 700 aaKnown RBP15.26■□□□□ 0.03
TNRC18-207ENST00000440081 KCNA3P22001 575 aa15.26■□□□□ 0.03
TNRC18-207ENST00000440081 MTHFSP49914 203 aa15.26■□□□□ 0.03
TNRC18-207ENST00000440081 AEBP1Q8IUX7 1158 aa15.26■□□□□ 0.03
TNRC18-207ENST00000440081 NMRK2Q9NPI5 230 aa15.26■□□□□ 0.03
TNRC18-207ENST00000440081 TJP1Q07157 1748 aa15.26■□□□□ 0.03
TNRC18-207ENST00000440081 CRKLP46109 303 aaKnown RBP15.25■□□□□ 0.03
TNRC18-207ENST00000440081 C1orf141Q5JVX7 400 aa15.25■□□□□ 0.03
TNRC18-207ENST00000440081 CCER1Q8TC90 406 aaPredicted RBP15.25■□□□□ 0.03
TNRC18-207ENST00000440081 PANK3Q9H999 370 aa15.25■□□□□ 0.03
TNRC18-207ENST00000440081 USP42Q9H9J4 1324 aaKnown RBP15.24■□□□□ 0.03
TNRC18-207ENST00000440081 FKBP8Q14318 412 aa15.24■□□□□ 0.03
TNRC18-207ENST00000440081 C9orf131Q5VYM1 1079 aa15.24■□□□□ 0.03
TNRC18-207ENST00000440081 NFATC2IPQ8NCF5 419 aa15.24■□□□□ 0.03
TNRC18-207ENST00000440081 PIM2Q9P1W9 311 aa15.24■□□□□ 0.03
TNRC18-207ENST00000440081 SRP68Q9UHB9 627 aaKnown RBP15.24■□□□□ 0.03
TNRC18-207ENST00000440081 DDR1Q08345 913 aa15.23■□□□□ 0.03
TNRC18-207ENST00000440081 DNAJC5GQ8N7S2 189 aa15.23■□□□□ 0.03
TNRC18-207ENST00000440081 SCN11AQ9UI33 1791 aa15.22■□□□□ 0.03
TNRC18-207ENST00000440081 DALRD3Q5D0E6 543 aaKnown RBP15.22■□□□□ 0.03
TNRC18-207ENST00000440081 SULT6B1Q6IMI4 303 aa15.22■□□□□ 0.03
TNRC18-207ENST00000440081 MORC1Q86VD1 984 aa15.22■□□□□ 0.03
TNRC18-207ENST00000440081 RBM46Q8TBY0 533 aaKnown RBP15.22■□□□□ 0.03
TNRC18-207ENST00000440081 ADAMTS7Q9UKP4 1686 aa15.22■□□□□ 0.03
TNRC18-207ENST00000440081 WDR90Q96KV7 1748 aa15.21■□□□□ 0.03
TNRC18-207ENST00000440081 EIF4G2P78344 907 aaKnown RBP eCLIP15.21■□□□□ 0.03
TNRC18-207ENST00000440081 CLSPNQ9HAW4 1339 aa15.2■□□□□ 0.02
TNRC18-207ENST00000440081 HSPA5P11021 654 aaKnown RBP15.2■□□□□ 0.02
TNRC18-207ENST00000440081 CHRNA5P30532 468 aa15.2■□□□□ 0.02
TNRC18-207ENST00000440081 INTS5Q6P9B9 1019 aaKnown RBP15.2■□□□□ 0.02
TNRC18-207ENST00000440081 C16orf71Q8IYS4 520 aaPredicted RBP15.2■□□□□ 0.02
TNRC18-207ENST00000440081 KCPQ6ZWJ8 1503 aa15.2■□□□□ 0.02
TNRC18-207ENST00000440081 POLRMTO00411 1230 aaKnown RBP15.19■□□□□ 0.02
TNRC18-207ENST00000440081 IL13P35225 146 aa15.19■□□□□ 0.02
TNRC18-207ENST00000440081 RNF181Q9P0P0 153 aa15.19■□□□□ 0.02
TNRC18-207ENST00000440081 KDM2BQ8NHM5 1336 aa15.18■□□□□ 0.02
TNRC18-207ENST00000440081 SBF1O95248 1867 aa15.18■□□□□ 0.02
TNRC18-207ENST00000440081 TM4SF1P30408 202 aa15.18■□□□□ 0.02
TNRC18-207ENST00000440081 DNAJC10Q8IXB1 793 aa15.18■□□□□ 0.02
TNRC18-207ENST00000440081 ZPR1O75312 459 aa15.17■□□□□ 0.02
TNRC18-207ENST00000440081 FSTL1Q12841 308 aa15.17■□□□□ 0.02
TNRC18-207ENST00000440081 AKAP4Q5JQC9 854 aa15.17■□□□□ 0.02
TNRC18-207ENST00000440081 USPL1Q5W0Q7 1092 aa15.17■□□□□ 0.02
TNRC18-207ENST00000440081 SLC52A2Q9HAB3 445 aa15.17■□□□□ 0.02
TNRC18-207ENST00000440081 SOS1Q07889 1333 aaPredicted RBP15.17■□□□□ 0.02
TNRC18-207ENST00000440081 TNRC6CQ9HCJ0 1690 aaKnown RBP15.16■□□□□ 0.02
TNRC18-207ENST00000440081 MRC1P22897 1456 aa15.16■□□□□ 0.02
TNRC18-207ENST00000440081 AFDNP55196 1824 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms