RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 ARHGEF10O15013 1369 aa18.87■□□□□ 0.61
APP-208ENST00000439274 CCT4P50991 539 aaKnown RBP18.87■□□□□ 0.61
APP-208ENST00000439274 ZDHHC9Q9Y397 364 aa18.87■□□□□ 0.61
APP-208ENST00000439274 EYA1Q99502 592 aa18.86■□□□□ 0.61
APP-208ENST00000439274 XRN1Q8IZH2 1706 aaKnown RBP18.86■□□□□ 0.61
APP-208ENST00000439274 GNAI2P04899 355 aa18.85■□□□□ 0.61
APP-208ENST00000439274 OSBPL3Q9H4L5 887 aa18.85■□□□□ 0.61
APP-208ENST00000439274 FOXD4L5Q5VV16 416 aaPredicted RBP18.85■□□□□ 0.61
APP-208ENST00000439274 FOXD4L4Q8WXT5 416 aaPredicted RBP18.85■□□□□ 0.61
APP-208ENST00000439274 SSH2Q76I76 1423 aa18.85■□□□□ 0.61
APP-208ENST00000439274 PNMA6EA0A0J9YXQ4 647 aa18.84■□□□□ 0.61
APP-208ENST00000439274 CWC22Q9HCG8 908 aaKnown RBP18.84■□□□□ 0.61
APP-208ENST00000439274 PRPF40AO75400 957 aaKnown RBP18.84■□□□□ 0.61
APP-208ENST00000439274 AMPHP49418 695 aa18.84■□□□□ 0.61
APP-208ENST00000439274 FKBP5Q13451 457 aaPredicted RBP18.83■□□□□ 0.61
APP-208ENST00000439274 ZSCAN23Q3MJ62 389 aa18.83■□□□□ 0.61
APP-208ENST00000439274 STK31Q9BXU1 1019 aa18.83■□□□□ 0.61
APP-208ENST00000439274 FLT4P35916 1363 aa18.83■□□□□ 0.61
APP-208ENST00000439274 IBTKQ9P2D0 1353 aaPredicted RBP18.83■□□□□ 0.61
APP-208ENST00000439274 NEK4P51957 841 aa18.83■□□□□ 0.6
APP-208ENST00000439274 FLIIQ13045 1269 aa18.83■□□□□ 0.6
APP-208ENST00000439274 RBM27Q9P2N5 1060 aaKnown RBP18.83■□□□□ 0.6
APP-208ENST00000439274 SBNO1A3KN83 1393 aa18.82■□□□□ 0.6
APP-208ENST00000439274 CCDC173Q0VFZ6 552 aa18.82■□□□□ 0.6
APP-208ENST00000439274 GPT2Q8TD30 523 aa18.82■□□□□ 0.6
APP-208ENST00000439274 PALD1Q9ULE6 856 aa18.82■□□□□ 0.6
APP-208ENST00000439274 TBX22Q9Y458 520 aa18.82■□□□□ 0.6
APP-208ENST00000439274 SALL3Q9BXA9 1300 aa18.82■□□□□ 0.6
APP-208ENST00000439274 KDRP35968 1356 aa18.82■□□□□ 0.6
APP-208ENST00000439274 FMN2Q9NZ56 1722 aa18.82■□□□□ 0.6
APP-208ENST00000439274 NGDNQ8NEJ9 315 aaKnown RBP18.81■□□□□ 0.6
APP-208ENST00000439274 LRRCC1Q9C099 1032 aa18.81■□□□□ 0.6
APP-208ENST00000439274 ZNF445P59923 1031 aa18.81■□□□□ 0.6
APP-208ENST00000439274 NOL8Q76FK4 1167 aaKnown RBP18.81■□□□□ 0.6
APP-208ENST00000439274 PPP1R9BQ96SB3 815 aa18.81■□□□□ 0.6
APP-208ENST00000439274 ESYT1Q9BSJ8 1104 aa18.81■□□□□ 0.6
APP-208ENST00000439274 IGSF1Q8N6C5 1336 aa18.81■□□□□ 0.6
APP-208ENST00000439274 MX1P20591 662 aa18.8■□□□□ 0.6
APP-208ENST00000439274 NUTM2GQ5VZR2 741 aa18.8■□□□□ 0.6
APP-208ENST00000439274 RILPL2Q969X0 211 aa18.8■□□□□ 0.6
APP-208ENST00000439274 TMX3Q96JJ7 454 aa18.8■□□□□ 0.6
APP-208ENST00000439274 TRIM6-TRIM34B2RNG4 842 aa18.79■□□□□ 0.6
APP-208ENST00000439274 AMOTL2Q9Y2J4 779 aa18.79■□□□□ 0.6
APP-208ENST00000439274 LRRFIP2Q9Y608 721 aaKnown RBP18.79■□□□□ 0.6
APP-208ENST00000439274 TTC21AQ8NDW8 1320 aa18.79■□□□□ 0.6
APP-208ENST00000439274 RBSNQ9H1K0 784 aa18.79■□□□□ 0.6
APP-208ENST00000439274 UNC5CLQ8IV45 518 aa18.78■□□□□ 0.6
APP-208ENST00000439274 NSFL1CQ9UNZ2 370 aaKnown RBP18.78■□□□□ 0.6
APP-208ENST00000439274 SETD1BQ9UPS6 1966 aaKnown RBP18.78■□□□□ 0.6
APP-208ENST00000439274 ATP8B2P98198 1209 aa18.78■□□□□ 0.6
APP-208ENST00000439274 CCDC30Q5VVM6 783 aa18.78■□□□□ 0.6
APP-208ENST00000439274 ANO2Q9NQ90 1003 aa18.78■□□□□ 0.6
APP-208ENST00000439274 GNAI3P08754 354 aa18.77■□□□□ 0.6
APP-208ENST00000439274 PRIM1P49642 420 aaKnown RBP18.77■□□□□ 0.6
APP-208ENST00000439274 ANP32BQ92688 251 aaKnown RBP18.77■□□□□ 0.6
APP-208ENST00000439274 CHMLP26374 656 aa18.77■□□□□ 0.6
APP-208ENST00000439274 LTV1Q96GA3 475 aaPredicted RBP18.77■□□□□ 0.6
APP-208ENST00000439274 GNAT3A8MTJ3 354 aa18.76■□□□□ 0.59
APP-208ENST00000439274 NLRP6P59044 892 aa18.76■□□□□ 0.59
APP-208ENST00000439274 IL17REQ8NFR9 667 aa18.76■□□□□ 0.59
APP-208ENST00000439274 IL1RAPL2Q9NP60 686 aa18.76■□□□□ 0.59
APP-208ENST00000439274 RGPD8O14715 1765 aaPredicted RBP18.76■□□□□ 0.59
APP-208ENST00000439274 IL25Q9H293 177 aa18.75■□□□□ 0.59
APP-208ENST00000439274 TMEM63CQ9P1W3 806 aa18.75■□□□□ 0.59
APP-208ENST00000439274 FAM208AQ9UK61 1670 aaKnown RBP18.75■□□□□ 0.59
APP-208ENST00000439274 TUBGCP6Q96RT7 1819 aa18.75■□□□□ 0.59
APP-208ENST00000439274 UPF3BQ9BZI7 483 aaKnown RBP18.74■□□□□ 0.59
APP-208ENST00000439274 CHD2O14647 1828 aaKnown RBP18.74■□□□□ 0.59
APP-208ENST00000439274 USP44Q9H0E7 712 aa18.74■□□□□ 0.59
APP-208ENST00000439274 PIK3C2AO00443 1686 aa18.74■□□□□ 0.59
APP-208ENST00000439274 MAP4K4O95819 1239 aaPredicted RBP18.73■□□□□ 0.59
APP-208ENST00000439274 MCCP23508 829 aa18.73■□□□□ 0.59
APP-208ENST00000439274 HOXC9P31274 260 aa18.73■□□□□ 0.59
APP-208ENST00000439274 NUTM1Q86Y26 1132 aa18.73■□□□□ 0.59
APP-208ENST00000439274 USHBP1Q8N6Y0 703 aa18.73■□□□□ 0.59
APP-208ENST00000439274 PHAXQ9H814 394 aaKnown RBP18.73■□□□□ 0.59
APP-208ENST00000439274 LRRC37A3O60309 1634 aa18.72■□□□□ 0.59
APP-208ENST00000439274 SYCE3A1L190 88 aa18.72■□□□□ 0.59
APP-208ENST00000439274 ZSCAN30Q86W11 494 aa18.72■□□□□ 0.59
APP-208ENST00000439274 HTATSF1O43719 755 aaKnown RBP18.72■□□□□ 0.59
APP-208ENST00000439274 FOXD4L6Q3SYB3 417 aaPredicted RBP18.72■□□□□ 0.59
APP-208ENST00000439274 FOXD4L3Q6VB84 417 aaPredicted RBP18.72■□□□□ 0.59
APP-208ENST00000439274 STAP2Q9UGK3 403 aa18.72■□□□□ 0.59
APP-208ENST00000439274 BRD1O95696 1058 aa18.71■□□□□ 0.59
APP-208ENST00000439274 UBTFL1P0CB47 393 aaPredicted RBP18.71■□□□□ 0.59
APP-208ENST00000439274 CUL4AQ13619 759 aa18.71■□□□□ 0.59
APP-208ENST00000439274 ANKLE2Q86XL3 938 aa18.71■□□□□ 0.59
APP-208ENST00000439274 KCNA6P17658 529 aa18.71■□□□□ 0.59
APP-208ENST00000439274 MAP3K5Q99683 1374 aa18.71■□□□□ 0.59
APP-208ENST00000439274 MCM2P49736 904 aa18.7■□□□□ 0.58
APP-208ENST00000439274 TAF7Q15545 349 aaPredicted RBP18.7■□□□□ 0.58
APP-208ENST00000439274 HDGFL1Q5TGJ6 251 aa18.7■□□□□ 0.58
APP-208ENST00000439274 NWD1Q149M9 1564 aa18.69■□□□□ 0.58
APP-208ENST00000439274 ANAPC15P60006 121 aa18.69■□□□□ 0.58
APP-208ENST00000439274 LRSAM1Q6UWE0 723 aa18.68■□□□□ 0.58
APP-208ENST00000439274 PPP1R42Q7Z4L9 355 aa18.68■□□□□ 0.58
APP-208ENST00000439274 UBE2Q2Q8WVN8 375 aa18.68■□□□□ 0.58
APP-208ENST00000439274 SRCIN1Q9C0H9 1055 aa18.68■□□□□ 0.58
APP-208ENST00000439274 SOS1Q07889 1333 aaPredicted RBP18.68■□□□□ 0.58
APP-208ENST00000439274 SURF6O75683 361 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms