RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 FSD1Q9BTV5 496 aa14.02□□□□□ -0.16
TRAPPC9-202ENST00000438773 PTMSP20962 102 aa14.02□□□□□ -0.16
TRAPPC9-202ENST00000438773 SLC39A6Q13433 755 aa14.02□□□□□ -0.16
TRAPPC9-202ENST00000438773 FMNL2Q96PY5 1086 aa14.02□□□□□ -0.16
TRAPPC9-202ENST00000438773 TOMM22Q9NS69 142 aa14.02□□□□□ -0.16
TRAPPC9-202ENST00000438773 TMOD3Q9NYL9 352 aa14.02□□□□□ -0.16
TRAPPC9-202ENST00000438773 FAM135BQ49AJ0 1406 aa14.02□□□□□ -0.17
TRAPPC9-202ENST00000438773 DDX17Q92841 729 aaKnown RBP14.02□□□□□ -0.17
TRAPPC9-202ENST00000438773 HYPKQ9NX55 129 aa14.02□□□□□ -0.17
TRAPPC9-202ENST00000438773 NCBP3Q53F19 620 aaKnown RBP14.01□□□□□ -0.17
TRAPPC9-202ENST00000438773 TBC1D32Q96NH3 1257 aa14.01□□□□□ -0.17
TRAPPC9-202ENST00000438773 CHPF2Q9P2E5 772 aa14.01□□□□□ -0.17
TRAPPC9-202ENST00000438773 KAT6BQ8WYB5 2073 aa14.01□□□□□ -0.17
TRAPPC9-202ENST00000438773 ATP7BP35670 1465 aa14.01□□□□□ -0.17
TRAPPC9-202ENST00000438773 MAP4K4O95819 1239 aaPredicted RBP14.01□□□□□ -0.17
TRAPPC9-202ENST00000438773 PLEKHF1Q96S99 279 aa14.01□□□□□ -0.17
TRAPPC9-202ENST00000438773 MAP3K5Q99683 1374 aa14.01□□□□□ -0.17
TRAPPC9-202ENST00000438773 PIK3R4Q99570 1358 aa14□□□□□ -0.17
TRAPPC9-202ENST00000438773 CHL1O00533 1208 aa14□□□□□ -0.17
TRAPPC9-202ENST00000438773 RNF20Q5VTR2 975 aa14□□□□□ -0.17
TRAPPC9-202ENST00000438773 UBE2Q2Q8WVN8 375 aa14□□□□□ -0.17
TRAPPC9-202ENST00000438773 MYD88Q99836 296 aa14□□□□□ -0.17
TRAPPC9-202ENST00000438773 ZBTB40Q9NUA8 1239 aa14□□□□□ -0.17
TRAPPC9-202ENST00000438773 GLI2P10070 1586 aa14□□□□□ -0.17
TRAPPC9-202ENST00000438773 NEK4P51957 841 aa14□□□□□ -0.17
TRAPPC9-202ENST00000438773 NUTM1Q86Y26 1132 aa14□□□□□ -0.17
TRAPPC9-202ENST00000438773 BCL11BQ9C0K0 894 aaPredicted RBP14□□□□□ -0.17
TRAPPC9-202ENST00000438773 AACSQ86V21 672 aa14□□□□□ -0.17
TRAPPC9-202ENST00000438773 XRCC6P12956 609 aaKnown RBP eCLIP13.99□□□□□ -0.17
TRAPPC9-202ENST00000438773 KIF1BPQ96EK5 621 aa13.99□□□□□ -0.17
TRAPPC9-202ENST00000438773 DNAJC2Q99543 621 aaKnown RBP13.99□□□□□ -0.17
TRAPPC9-202ENST00000438773 MAP3K2Q9Y2U5 619 aa13.99□□□□□ -0.17
TRAPPC9-202ENST00000438773 DDX49Q9Y6V7 483 aaKnown RBP13.99□□□□□ -0.17
TRAPPC9-202ENST00000438773 ALKQ9UM73 1620 aa13.99□□□□□ -0.17
TRAPPC9-202ENST00000438773 DDX11L8A8MPP1 907 aa13.99□□□□□ -0.17
TRAPPC9-202ENST00000438773 NBPF6Q5VWK0 638 aa13.99□□□□□ -0.17
TRAPPC9-202ENST00000438773 NBPF4Q96M43 638 aa13.99□□□□□ -0.17
TRAPPC9-202ENST00000438773 GNL2Q13823 731 aaKnown RBP13.99□□□□□ -0.17
TRAPPC9-202ENST00000438773 STARD3NLO95772 234 aa13.98□□□□□ -0.17
TRAPPC9-202ENST00000438773 CAMSAP1Q5T5Y3 1602 aa13.98□□□□□ -0.17
TRAPPC9-202ENST00000438773 AATKQ6ZMQ8 1374 aa13.98□□□□□ -0.17
TRAPPC9-202ENST00000438773 MX1P20591 662 aa13.98□□□□□ -0.17
TRAPPC9-202ENST00000438773 ZCRB1Q8TBF4 217 aaKnown RBP13.98□□□□□ -0.17
TRAPPC9-202ENST00000438773 APPP05067 770 aa13.98□□□□□ -0.17
TRAPPC9-202ENST00000438773 FAM13BQ9NYF5 915 aa13.98□□□□□ -0.17
TRAPPC9-202ENST00000438773 RABEP1Q15276 862 aa13.97□□□□□ -0.17
TRAPPC9-202ENST00000438773 NFATC2IPQ8NCF5 419 aa13.97□□□□□ -0.17
TRAPPC9-202ENST00000438773 CCDC85AQ96PX6 553 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC9-202ENST00000438773 EXOC5O00471 708 aa13.97□□□□□ -0.17
TRAPPC9-202ENST00000438773 SNRPA1P09661 255 aaKnown RBP13.97□□□□□ -0.17
TRAPPC9-202ENST00000438773 MPNDQ8N594 471 aa13.97□□□□□ -0.17
TRAPPC9-202ENST00000438773 USP6P35125 1406 aa13.97□□□□□ -0.17
TRAPPC9-202ENST00000438773 IQGAP1P46940 1657 aa13.96□□□□□ -0.17
TRAPPC9-202ENST00000438773 NUCB1Q02818 461 aa13.96□□□□□ -0.17
TRAPPC9-202ENST00000438773 WASHC4Q2M389 1173 aa13.96□□□□□ -0.17
TRAPPC9-202ENST00000438773 CCDC57Q2TAC2 916 aa13.96□□□□□ -0.17
TRAPPC9-202ENST00000438773 ANKRD44Q8N8A2 993 aa13.96□□□□□ -0.17
TRAPPC9-202ENST00000438773 MYOM1P52179 1685 aa13.96□□□□□ -0.17
TRAPPC9-202ENST00000438773 G2E3Q7L622 706 aa13.96□□□□□ -0.17
TRAPPC9-202ENST00000438773 PPP1R42Q7Z4L9 355 aa13.96□□□□□ -0.17
TRAPPC9-202ENST00000438773 LGR6Q9HBX8 967 aa13.96□□□□□ -0.17
TRAPPC9-202ENST00000438773 VPS37DQ86XT2 251 aa13.96□□□□□ -0.18
TRAPPC9-202ENST00000438773 MCM4P33991 863 aa13.95□□□□□ -0.18
TRAPPC9-202ENST00000438773 A0A087WZG4 1122 aa13.95□□□□□ -0.18
TRAPPC9-202ENST00000438773 RAB11FIP3O75154 756 aa13.95□□□□□ -0.18
TRAPPC9-202ENST00000438773 ZBTB3Q9H5J0 574 aa13.95□□□□□ -0.18
TRAPPC9-202ENST00000438773 ATP5J2-PTCD1G3V325 749 aa13.95□□□□□ -0.18
TRAPPC9-202ENST00000438773 BMP2KLQ5H9B9 411 aa13.95□□□□□ -0.18
TRAPPC9-202ENST00000438773 CNNM1Q9NRU3 951 aa13.95□□□□□ -0.18
TRAPPC9-202ENST00000438773 NPHP4O75161 1426 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC9-202ENST00000438773 ZBTB7BO15156 539 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC9-202ENST00000438773 RNMTO43148 476 aaKnown RBP13.95□□□□□ -0.18
TRAPPC9-202ENST00000438773 SETBP1Q9Y6X0 1596 aa13.95□□□□□ -0.18
TRAPPC9-202ENST00000438773 DRC7Q8IY82 874 aa13.94□□□□□ -0.18
TRAPPC9-202ENST00000438773 G3V3G9 751 aa13.94□□□□□ -0.18
TRAPPC9-202ENST00000438773 DCAF8Q5TAQ9 597 aa13.94□□□□□ -0.18
TRAPPC9-202ENST00000438773 KIF3AQ9Y496 699 aa13.94□□□□□ -0.18
TRAPPC9-202ENST00000438773 COPS6Q7L5N1 327 aa13.94□□□□□ -0.18
TRAPPC9-202ENST00000438773 SMC5Q8IY18 1101 aa13.94□□□□□ -0.18
TRAPPC9-202ENST00000438773 FAM184AQ8NB25 1140 aa13.94□□□□□ -0.18
TRAPPC9-202ENST00000438773 SYAP1Q96A49 352 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC9-202ENST00000438773 CEP126Q9P2H0 1117 aa13.94□□□□□ -0.18
TRAPPC9-202ENST00000438773 ISY1Q9ULR0 285 aaKnown RBP13.94□□□□□ -0.18
TRAPPC9-202ENST00000438773 PIP4K2AP48426 406 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC9-202ENST00000438773 NUCB2P80303 420 aa13.93□□□□□ -0.18
TRAPPC9-202ENST00000438773 ANKRD13DQ6ZTN6 518 aa13.93□□□□□ -0.18
TRAPPC9-202ENST00000438773 XAGE3Q8WTP9 111 aa13.93□□□□□ -0.18
TRAPPC9-202ENST00000438773 PHAXQ9H814 394 aaKnown RBP13.93□□□□□ -0.18
TRAPPC9-202ENST00000438773 TMEM94Q12767 1356 aa13.93□□□□□ -0.18
TRAPPC9-202ENST00000438773 HIP1O00291 1037 aa13.93□□□□□ -0.18
TRAPPC9-202ENST00000438773 CWC27Q6UX04 472 aaKnown RBP13.93□□□□□ -0.18
TRAPPC9-202ENST00000438773 SLAIN2Q9P270 581 aa13.93□□□□□ -0.18
TRAPPC9-202ENST00000438773 ARHGEF10O15013 1369 aa13.93□□□□□ -0.18
TRAPPC9-202ENST00000438773 TSHZ3Q63HK5 1081 aa13.93□□□□□ -0.18
TRAPPC9-202ENST00000438773 AGLP35573 1532 aa13.93□□□□□ -0.18
TRAPPC9-202ENST00000438773 DIP2BQ9P265 1576 aa13.93□□□□□ -0.18
TRAPPC9-202ENST00000438773 TRAK2O60296 914 aa13.93□□□□□ -0.18
TRAPPC9-202ENST00000438773 GLRX3O76003 335 aaKnown RBP13.93□□□□□ -0.18
TRAPPC9-202ENST00000438773 UBE3BQ7Z3V4 1068 aa13.93□□□□□ -0.18
TRAPPC9-202ENST00000438773 C8orf37Q96NL8 207 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms