RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 NOD1Q9Y239 953 aa7.08□□□□□ -1.28
HMGB3P12-201ENST00000438745 MTFR1Q15390 333 aa7.07□□□□□ -1.28
HMGB3P12-201ENST00000438745 TAS1R3Q7RTX0 852 aa7.07□□□□□ -1.28
HMGB3P12-201ENST00000438745 SMTNP53814 917 aa7.06□□□□□ -1.28
HMGB3P12-201ENST00000438745 DBN1Q16643 649 aa7.06□□□□□ -1.28
HMGB3P12-201ENST00000438745 SV2AQ7L0J3 742 aa7.06□□□□□ -1.28
HMGB3P12-201ENST00000438745 ZNF295-AS1Q8N0V1 137 aa7.06□□□□□ -1.28
HMGB3P12-201ENST00000438745 DEPDC4Q8N2C3 294 aa7.06□□□□□ -1.28
HMGB3P12-201ENST00000438745 USP17L3A6NCW0 530 aa7.05□□□□□ -1.28
HMGB3P12-201ENST00000438745 USP17L4A6NCW7 530 aa7.05□□□□□ -1.28
HMGB3P12-201ENST00000438745 GTF2IP78347 998 aa7.05□□□□□ -1.28
HMGB3P12-201ENST00000438745 KRT76Q01546 638 aa7.05□□□□□ -1.28
HMGB3P12-201ENST00000438745 C4orf17Q53FE4 359 aa7.05□□□□□ -1.28
HMGB3P12-201ENST00000438745 USP17L2Q6R6M4 530 aa7.05□□□□□ -1.28
HMGB3P12-201ENST00000438745 USP17L1Q7RTZ2 530 aa7.05□□□□□ -1.28
HMGB3P12-201ENST00000438745 TRIM22Q8IYM9 498 aa7.05□□□□□ -1.28
HMGB3P12-201ENST00000438745 RHBDD1Q8TEB9 315 aa7.05□□□□□ -1.28
HMGB3P12-201ENST00000438745 TIMMDC1Q9NPL8 285 aa7.05□□□□□ -1.28
HMGB3P12-201ENST00000438745 TFIP11Q9UBB9 837 aaKnown RBP7.05□□□□□ -1.28
HMGB3P12-201ENST00000438745 CDK2AP1O14519 115 aa7.04□□□□□ -1.28
HMGB3P12-201ENST00000438745 DKK1O94907 266 aa7.04□□□□□ -1.28
HMGB3P12-201ENST00000438745 F11P03951 625 aa7.04□□□□□ -1.28
HMGB3P12-201ENST00000438745 IQSEC3Q9UPP2 1182 aaPredicted RBP7.04□□□□□ -1.28
HMGB3P12-201ENST00000438745 PALM3A6NDB9 673 aaPredicted RBP7.03□□□□□ -1.28
HMGB3P12-201ENST00000438745 FAM181BA6NEQ2 426 aa7.03□□□□□ -1.28
HMGB3P12-201ENST00000438745 A6NJY4 79 aa7.03□□□□□ -1.28
HMGB3P12-201ENST00000438745 CLDN10P78369 228 aa7.03□□□□□ -1.28
HMGB3P12-201ENST00000438745 TLR1Q15399 786 aa7.03□□□□□ -1.28
HMGB3P12-201ENST00000438745 TMEM214Q6NUQ4 689 aaKnown RBP7.03□□□□□ -1.28
HMGB3P12-201ENST00000438745 TRIM50Q86XT4 487 aa7.03□□□□□ -1.28
HMGB3P12-201ENST00000438745 ZNF837Q96EG3 531 aaPredicted RBP7.03□□□□□ -1.28
HMGB3P12-201ENST00000438745 CALR3Q96L12 384 aaKnown RBP7.03□□□□□ -1.28
HMGB3P12-201ENST00000438745 COL25A1Q9BXS0 654 aaPredicted RBP7.03□□□□□ -1.28
HMGB3P12-201ENST00000438745 PPP1R12CQ9BZL4 782 aa7.03□□□□□ -1.28
HMGB3P12-201ENST00000438745 MKRN1Q9UHC7 482 aaKnown RBP7.03□□□□□ -1.28
HMGB3P12-201ENST00000438745 MAFBQ9Y5Q3 323 aaPredicted RBP7.03□□□□□ -1.28
HMGB3P12-201ENST00000438745 GTF3C3Q9Y5Q9 886 aa7.03□□□□□ -1.28
HMGB3P12-201ENST00000438745 A0A1B0GTH6 734 aa7.02□□□□□ -1.29
HMGB3P12-201ENST00000438745 H7C1W4 665 aa7.02□□□□□ -1.29
HMGB3P12-201ENST00000438745 EPHA4P54764 986 aa7.02□□□□□ -1.29
HMGB3P12-201ENST00000438745 GNASQ5JWF2 1037 aa7.02□□□□□ -1.29
HMGB3P12-201ENST00000438745 RNFT1Q5M7Z0 435 aa7.02□□□□□ -1.29
HMGB3P12-201ENST00000438745 LARGE2Q8N3Y3 721 aa7.02□□□□□ -1.29
HMGB3P12-201ENST00000438745 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.02□□□□□ -1.29
HMGB3P12-201ENST00000438745 ZMYND15Q9H091 742 aa7.02□□□□□ -1.29
HMGB3P12-201ENST00000438745 ZNF358Q9NW07 568 aa7.02□□□□□ -1.29
HMGB3P12-201ENST00000438745 KIAA1024Q9UPX6 916 aa7.02□□□□□ -1.29
HMGB3P12-201ENST00000438745 CDC14CA4D256 554 aa7.01□□□□□ -1.29
HMGB3P12-201ENST00000438745 BACH1O14867 736 aa7.01□□□□□ -1.29
HMGB3P12-201ENST00000438745 THBS1P07996 1170 aa7.01□□□□□ -1.29
HMGB3P12-201ENST00000438745 PHKA2P46019 1235 aa7.01□□□□□ -1.29
HMGB3P12-201ENST00000438745 ATP1A2P50993 1020 aa7.01□□□□□ -1.29
HMGB3P12-201ENST00000438745 UBAP2LQ14157 1087 aaKnown RBP7.01□□□□□ -1.29
HMGB3P12-201ENST00000438745 KANK4Q5T7N3 995 aaPredicted RBP7.01□□□□□ -1.29
HMGB3P12-201ENST00000438745 GAS2L1Q99501 681 aaPredicted RBP7.01□□□□□ -1.29
HMGB3P12-201ENST00000438745 SERTAD1Q9UHV2 236 aa7.01□□□□□ -1.29
HMGB3P12-201ENST00000438745 ZNF777Q9ULD5 760 aaPredicted RBP7.01□□□□□ -1.29
HMGB3P12-201ENST00000438745 M0R2N6 131 aa7□□□□□ -1.29
HMGB3P12-201ENST00000438745 GTF2E1P29083 439 aaPredicted RBP7□□□□□ -1.29
HMGB3P12-201ENST00000438745 FOXK2Q01167 660 aa7□□□□□ -1.29
HMGB3P12-201ENST00000438745 GAS6Q14393 721 aa7□□□□□ -1.29
HMGB3P12-201ENST00000438745 LBRQ14739 615 aaKnown RBP7□□□□□ -1.29
HMGB3P12-201ENST00000438745 CCDC102BQ68D86 513 aa7□□□□□ -1.29
HMGB3P12-201ENST00000438745 SIX5Q8N196 739 aa7□□□□□ -1.29
HMGB3P12-201ENST00000438745 OGFOD1Q8N543 542 aa7□□□□□ -1.29
HMGB3P12-201ENST00000438745 CNTNAP3BQ96NU0 1288 aa7□□□□□ -1.29
HMGB3P12-201ENST00000438745 NIFKQ9BYG3 293 aaKnown RBP7□□□□□ -1.29
HMGB3P12-201ENST00000438745 CNTNAP3Q9BZ76 1288 aa7□□□□□ -1.29
HMGB3P12-201ENST00000438745 DNAAF2Q9NVR5 837 aaKnown RBP7□□□□□ -1.29
HMGB3P12-201ENST00000438745 SCHIP1Q9P0W5 487 aaPredicted RBP7□□□□□ -1.29
HMGB3P12-201ENST00000438745 USP3Q9Y6I4 520 aa7□□□□□ -1.29
HMGB3P12-201ENST00000438745 SLURP2P0DP57 97 aa6.99□□□□□ -1.29
HMGB3P12-201ENST00000438745 MSX1P28360 303 aa6.99□□□□□ -1.29
HMGB3P12-201ENST00000438745 RIPOR1Q6ZS17 1223 aa6.99□□□□□ -1.29
HMGB3P12-201ENST00000438745 CRISPLD1Q9H336 500 aa6.99□□□□□ -1.29
HMGB3P12-201ENST00000438745 GSK3AP49840 483 aa6.98□□□□□ -1.29
HMGB3P12-201ENST00000438745 TPCN2Q8NHX9 752 aa6.98□□□□□ -1.29
HMGB3P12-201ENST00000438745 C1orf216Q8TAB5 229 aa6.98□□□□□ -1.29
HMGB3P12-201ENST00000438745 CFHR5Q9BXR6 569 aa6.98□□□□□ -1.29
HMGB3P12-201ENST00000438745 PSME1Q06323 249 aa6.97□□□□□ -1.29
HMGB3P12-201ENST00000438745 TEAD4Q15561 434 aa6.97□□□□□ -1.29
HMGB3P12-201ENST00000438745 CFAP70Q5T0N1 1121 aa6.97□□□□□ -1.29
HMGB3P12-201ENST00000438745 POTEAQ6S8J7 498 aa6.97□□□□□ -1.29
HMGB3P12-201ENST00000438745 C7orf43Q8WVR3 580 aa6.97□□□□□ -1.29
HMGB3P12-201ENST00000438745 GTPBP3Q969Y2 492 aaKnown RBP6.97□□□□□ -1.29
HMGB3P12-201ENST00000438745 NUCKS1Q9H1E3 243 aaKnown RBP6.97□□□□□ -1.29
HMGB3P12-201ENST00000438745 LMOD1P29536 600 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P12-201ENST00000438745 SRSF11Q05519 484 aaKnown RBP6.96□□□□□ -1.3
HMGB3P12-201ENST00000438745 PTK7Q13308 1070 aa6.96□□□□□ -1.3
HMGB3P12-201ENST00000438745 FOXR1Q6PIV2 292 aa6.96□□□□□ -1.3
HMGB3P12-201ENST00000438745 TNS4Q8IZW8 715 aa6.96□□□□□ -1.3
HMGB3P12-201ENST00000438745 WHAMMQ8TF30 809 aa6.96□□□□□ -1.3
HMGB3P12-201ENST00000438745 ZDHHC3Q9NYG2 299 aa6.96□□□□□ -1.3
HMGB3P12-201ENST00000438745 GPR25O00155 361 aa6.95□□□□□ -1.3
HMGB3P12-201ENST00000438745 ATP4AP20648 1035 aa6.95□□□□□ -1.3
HMGB3P12-201ENST00000438745 RASA1P20936 1047 aa6.95□□□□□ -1.3
HMGB3P12-201ENST00000438745 PLA2G4AP47712 749 aa6.95□□□□□ -1.3
HMGB3P12-201ENST00000438745 ZDHHC1Q8WTX9 485 aa6.95□□□□□ -1.3
HMGB3P12-201ENST00000438745 RUBCNLQ9H714 662 aa6.95□□□□□ -1.3
HMGB3P12-201ENST00000438745 VRTNQ9H8Y1 702 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms