RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 ATG3Q9NT62 314 aa24.96■■□□□ 1.59
GTF3A-204ENST00000438571 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.95■■□□□ 1.58
GTF3A-204ENST00000438571 AEBP1Q8IUX7 1158 aa24.95■■□□□ 1.58
GTF3A-204ENST00000438571 FLAD1Q8NFF5 587 aa24.95■■□□□ 1.58
GTF3A-204ENST00000438571 KIF13BQ9NQT8 1826 aa24.95■■□□□ 1.58
GTF3A-204ENST00000438571 TJP1Q07157 1748 aa24.94■■□□□ 1.58
GTF3A-204ENST00000438571 PLEKHG2Q9H7P9 1386 aa24.93■■□□□ 1.58
GTF3A-204ENST00000438571 N4BP2Q86UW6 1770 aaPredicted RBP24.93■■□□□ 1.58
GTF3A-204ENST00000438571 ATP6V1AP38606 617 aa24.92■■□□□ 1.58
GTF3A-204ENST00000438571 MORC1Q86VD1 984 aa24.92■■□□□ 1.58
GTF3A-204ENST00000438571 SLC4A9Q96Q91 983 aa24.92■■□□□ 1.58
GTF3A-204ENST00000438571 GNPATO15228 680 aa24.9■■□□□ 1.58
GTF3A-204ENST00000438571 SSFA2P28290 1259 aa24.9■■□□□ 1.58
GTF3A-204ENST00000438571 ZNF530Q6P9A1 599 aaPredicted RBP24.89■■□□□ 1.58
GTF3A-204ENST00000438571 KIF7Q2M1P5 1343 aa24.88■■□□□ 1.57
GTF3A-204ENST00000438571 CICQ96RK0 1608 aaPredicted RBP24.88■■□□□ 1.57
GTF3A-204ENST00000438571 WWC3Q9ULE0 1092 aa24.87■■□□□ 1.57
GTF3A-204ENST00000438571 CD2APQ9Y5K6 639 aa24.87■■□□□ 1.57
GTF3A-204ENST00000438571 BRCA1P38398 1863 aaKnown RBP24.87■■□□□ 1.57
GTF3A-204ENST00000438571 HMGB2P26583 209 aaKnown RBP24.86■■□□□ 1.57
GTF3A-204ENST00000438571 PLEKHO1Q53GL0 409 aaPredicted RBP24.86■■□□□ 1.57
GTF3A-204ENST00000438571 AMER1Q5JTC6 1135 aaPredicted RBP24.86■■□□□ 1.57
GTF3A-204ENST00000438571 ERVV-2B6SEH9 535 aa24.85■■□□□ 1.57
GTF3A-204ENST00000438571 DCAF5Q96JK2 942 aa24.85■■□□□ 1.57
GTF3A-204ENST00000438571 RBM42Q9BTD8 480 aaKnown RBP24.85■■□□□ 1.57
GTF3A-204ENST00000438571 KNSTRNQ9Y448 316 aa24.85■■□□□ 1.57
GTF3A-204ENST00000438571 IL13P35225 146 aa24.84■■□□□ 1.57
GTF3A-204ENST00000438571 SULT6B1Q6IMI4 303 aa24.84■■□□□ 1.57
GTF3A-204ENST00000438571 ADAMTS7Q9UKP4 1686 aa24.83■■□□□ 1.57
GTF3A-204ENST00000438571 HSP90AB1P08238 724 aaKnown RBP24.82■■□□□ 1.56
GTF3A-204ENST00000438571 GRIN3BO60391 1043 aa24.81■■□□□ 1.56
GTF3A-204ENST00000438571 AMOTQ4VCS5 1084 aa24.81■■□□□ 1.56
GTF3A-204ENST00000438571 CABP4P57796 275 aa24.8■■□□□ 1.56
GTF3A-204ENST00000438571 MTHFSP49914 203 aa24.79■■□□□ 1.56
GTF3A-204ENST00000438571 C1QTNF8P60827 252 aa24.79■■□□□ 1.56
GTF3A-204ENST00000438571 MMP10P09238 476 aa24.78■■□□□ 1.56
GTF3A-204ENST00000438571 C1orf141Q5JVX7 400 aa24.78■■□□□ 1.56
GTF3A-204ENST00000438571 CNTNAP4Q9C0A0 1308 aa24.78■■□□□ 1.56
GTF3A-204ENST00000438571 ATP10DQ9P241 1426 aa24.78■■□□□ 1.56
GTF3A-204ENST00000438571 PXDNLA1KZ92 1463 aa24.77■■□□□ 1.56
GTF3A-204ENST00000438571 RTCBQ9Y3I0 505 aaKnown RBP24.77■■□□□ 1.56
GTF3A-204ENST00000438571 MRC1P22897 1456 aa24.77■■□□□ 1.56
GTF3A-204ENST00000438571 UBR2Q8IWV8 1755 aa24.76■■□□□ 1.55
GTF3A-204ENST00000438571 PTCD1O75127 700 aaKnown RBP24.76■■□□□ 1.55
GTF3A-204ENST00000438571 NFATC2IPQ8NCF5 419 aa24.76■■□□□ 1.55
GTF3A-204ENST00000438571 ARHGEF1Q92888 912 aaKnown RBP24.76■■□□□ 1.55
GTF3A-204ENST00000438571 ADCY9O60503 1353 aa24.75■■□□□ 1.55
GTF3A-204ENST00000438571 SENP3-EIF4A1A0A087X0R7 540 aa24.74■■□□□ 1.55
GTF3A-204ENST00000438571 PER1O15534 1290 aaPredicted RBP24.74■■□□□ 1.55
GTF3A-204ENST00000438571 GIGYF1O75420 1035 aaPredicted RBP24.74■■□□□ 1.55
GTF3A-204ENST00000438571 HMOX1P09601 288 aa24.74■■□□□ 1.55
GTF3A-204ENST00000438571 TRAPPC3LQ5T215 181 aa24.74■■□□□ 1.55
GTF3A-204ENST00000438571 C10orf71Q711Q0 1435 aa24.74■■□□□ 1.55
GTF3A-204ENST00000438571 COL3A1P02461 1466 aaPredicted RBP24.74■■□□□ 1.55
GTF3A-204ENST00000438571 ARFGEF1Q9Y6D6 1849 aa24.74■■□□□ 1.55
GTF3A-204ENST00000438571 AFDNP55196 1824 aaKnown RBP24.73■■□□□ 1.55
GTF3A-204ENST00000438571 SIPA1L3O60292 1781 aaPredicted RBP24.73■■□□□ 1.55
GTF3A-204ENST00000438571 CC2D1BQ5T0F9 858 aaKnown RBP24.73■■□□□ 1.55
GTF3A-204ENST00000438571 RC3H1Q5TC82 1133 aaKnown RBP24.73■■□□□ 1.55
GTF3A-204ENST00000438571 RPS6KA4O75676 772 aa24.72■■□□□ 1.55
GTF3A-204ENST00000438571 GYS1P13807 737 aa24.72■■□□□ 1.55
GTF3A-204ENST00000438571 KCPQ6ZWJ8 1503 aa24.71■■□□□ 1.55
GTF3A-204ENST00000438571 LGR6Q9HBX8 967 aa24.71■■□□□ 1.55
GTF3A-204ENST00000438571 CRKLP46109 303 aaKnown RBP24.7■■□□□ 1.54
GTF3A-204ENST00000438571 AKAP4Q5JQC9 854 aa24.7■■□□□ 1.54
GTF3A-204ENST00000438571 ADRA2BP18089 450 aa24.69■■□□□ 1.54
GTF3A-204ENST00000438571 CNGB1Q14028 1251 aaPredicted RBP24.69■■□□□ 1.54
GTF3A-204ENST00000438571 SRP68Q9UHB9 627 aaKnown RBP24.69■■□□□ 1.54
GTF3A-204ENST00000438571 RFC4P35249 363 aa24.68■■□□□ 1.54
GTF3A-204ENST00000438571 NLGN1Q8N2Q7 840 aa24.67■■□□□ 1.54
GTF3A-204ENST00000438571 SLC39A6Q13433 755 aa24.66■■□□□ 1.54
GTF3A-204ENST00000438571 MTHFSDQ2M296 383 aaKnown RBP24.66■■□□□ 1.54
GTF3A-204ENST00000438571 ZNF526Q8TF50 670 aaPredicted RBP24.66■■□□□ 1.54
GTF3A-204ENST00000438571 SLC52A2Q9HAB3 445 aa24.66■■□□□ 1.54
GTF3A-204ENST00000438571 A0A0G2JLW4 131 aa24.65■■□□□ 1.54
GTF3A-204ENST00000438571 RNMTO43148 476 aaKnown RBP24.65■■□□□ 1.54
GTF3A-204ENST00000438571 DNAJC10Q8IXB1 793 aa24.65■■□□□ 1.54
GTF3A-204ENST00000438571 INTS5Q6P9B9 1019 aaKnown RBP24.64■■□□□ 1.54
GTF3A-204ENST00000438571 USP42Q9H9J4 1324 aaKnown RBP24.63■■□□□ 1.53
GTF3A-204ENST00000438571 DIAPH1O60610 1272 aaKnown RBP24.63■■□□□ 1.53
GTF3A-204ENST00000438571 FKBP8Q14318 412 aa24.63■■□□□ 1.53
GTF3A-204ENST00000438571 SBF1O95248 1867 aa24.62■■□□□ 1.53
GTF3A-204ENST00000438571 NRXN2Q9P2S2 1712 aa24.62■■□□□ 1.53
GTF3A-204ENST00000438571 DDR1Q08345 913 aa24.62■■□□□ 1.53
GTF3A-204ENST00000438571 DLEC1Q9Y238 1755 aa24.62■■□□□ 1.53
GTF3A-204ENST00000438571 DPEP1P16444 411 aa24.61■■□□□ 1.53
GTF3A-204ENST00000438571 CCDC87Q9NVE4 849 aa24.61■■□□□ 1.53
GTF3A-204ENST00000438571 PARP3Q9Y6F1 533 aa24.61■■□□□ 1.53
GTF3A-204ENST00000438571 NPC1L1Q9UHC9 1359 aa24.6■■□□□ 1.53
GTF3A-204ENST00000438571 TGFB2P61812 414 aa24.6■■□□□ 1.53
GTF3A-204ENST00000438571 GPBP1L1Q9HC44 474 aaPredicted RBP24.6■■□□□ 1.53
GTF3A-204ENST00000438571 BCS1LQ9Y276 419 aa24.6■■□□□ 1.53
GTF3A-204ENST00000438571 SOS1Q07889 1333 aaPredicted RBP24.59■■□□□ 1.53
GTF3A-204ENST00000438571 SCN7AQ01118 1682 aa24.57■■□□□ 1.52
GTF3A-204ENST00000438571 CYP19A1P11511 503 aaPredicted RBP24.57■■□□□ 1.52
GTF3A-204ENST00000438571 ZBTB1Q9Y2K1 713 aa24.57■■□□□ 1.52
GTF3A-204ENST00000438571 CCDC88AQ3V6T2 1871 aa24.57■■□□□ 1.52
GTF3A-204ENST00000438571 KCNA3P22001 575 aa24.56■■□□□ 1.52
GTF3A-204ENST00000438571 USPL1Q5W0Q7 1092 aa24.56■■□□□ 1.52
GTF3A-204ENST00000438571 ANKRD31Q8N7Z5 1873 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms