RNA–Protein interactions for RNA: ENST00000435914.1

PNKDP1-201, Transcript of PNKD pseudogene 1, humanhuman

BASIC

Gene PNKDP1, Length 430 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKDP1-201ENST00000435914 GPR162Q16538 588 aa8.49□□□□□ -1.05
PNKDP1-201ENST00000435914 AEBP1Q8IUX7 1158 aa8.49□□□□□ -1.05
PNKDP1-201ENST00000435914 CCER1Q8TC90 406 aaPredicted RBP8.49□□□□□ -1.05
PNKDP1-201ENST00000435914 AK7Q96M32 723 aa8.49□□□□□ -1.05
PNKDP1-201ENST00000435914 CD2APQ9Y5K6 639 aa8.49□□□□□ -1.05
PNKDP1-201ENST00000435914 KIF13BQ9NQT8 1826 aa8.49□□□□□ -1.05
PNKDP1-201ENST00000435914 KIF7Q2M1P5 1343 aa8.49□□□□□ -1.05
PNKDP1-201ENST00000435914 SCN11AQ9UI33 1791 aa8.48□□□□□ -1.05
PNKDP1-201ENST00000435914 PER1O15534 1290 aaPredicted RBP8.48□□□□□ -1.05
PNKDP1-201ENST00000435914 MSH5O43196 834 aa8.48□□□□□ -1.05
PNKDP1-201ENST00000435914 IL13P35225 146 aa8.48□□□□□ -1.05
PNKDP1-201ENST00000435914 KLHL34Q8N239 644 aa8.48□□□□□ -1.05
PNKDP1-201ENST00000435914 DCAF5Q96JK2 942 aa8.48□□□□□ -1.05
PNKDP1-201ENST00000435914 ADAMTS7Q9UKP4 1686 aa8.48□□□□□ -1.05
PNKDP1-201ENST00000435914 C4AP0C0L4 1744 aa8.47□□□□□ -1.05
PNKDP1-201ENST00000435914 TJP1Q07157 1748 aa8.47□□□□□ -1.05
PNKDP1-201ENST00000435914 ATP6V1AP38606 617 aa8.47□□□□□ -1.05
PNKDP1-201ENST00000435914 AMOTQ4VCS5 1084 aa8.47□□□□□ -1.05
PNKDP1-201ENST00000435914 PLEKHO1Q53GL0 409 aaPredicted RBP8.47□□□□□ -1.05
PNKDP1-201ENST00000435914 MORC1Q86VD1 984 aa8.47□□□□□ -1.05
PNKDP1-201ENST00000435914 GNPATO15228 680 aa8.46□□□□□ -1.06
PNKDP1-201ENST00000435914 GRIN3BO60391 1043 aa8.46□□□□□ -1.06
PNKDP1-201ENST00000435914 PHF14O94880 888 aa8.46□□□□□ -1.06
PNKDP1-201ENST00000435914 HSP90AB1P08238 724 aaKnown RBP8.46□□□□□ -1.06
PNKDP1-201ENST00000435914 RC3H1Q5TC82 1133 aaKnown RBP8.46□□□□□ -1.06
PNKDP1-201ENST00000435914 ZNF530Q6P9A1 599 aaPredicted RBP8.46□□□□□ -1.06
PNKDP1-201ENST00000435914 KNSTRNQ9Y448 316 aa8.46□□□□□ -1.06
PNKDP1-201ENST00000435914 CNTNAP4Q9C0A0 1308 aa8.46□□□□□ -1.06
PNKDP1-201ENST00000435914 ADCY9O60503 1353 aa8.46□□□□□ -1.06
PNKDP1-201ENST00000435914 MRC1P22897 1456 aa8.45□□□□□ -1.06
PNKDP1-201ENST00000435914 VIRMAQ69YN4 1812 aaKnown RBP8.45□□□□□ -1.06
PNKDP1-201ENST00000435914 SULT6B1Q6IMI4 303 aa8.45□□□□□ -1.06
PNKDP1-201ENST00000435914 CEP350Q5VT06 3117 aa8.45□□□□□ -1.06
PNKDP1-201ENST00000435914 COL3A1P02461 1466 aaPredicted RBP8.45□□□□□ -1.06
PNKDP1-201ENST00000435914 RPS6KA4O75676 772 aa8.44□□□□□ -1.06
PNKDP1-201ENST00000435914 C1QTNF8P60827 252 aa8.44□□□□□ -1.06
PNKDP1-201ENST00000435914 PELP1Q8IZL8 1130 aaKnown RBP8.44□□□□□ -1.06
PNKDP1-201ENST00000435914 ARHGEF1Q92888 912 aaKnown RBP8.44□□□□□ -1.06
PNKDP1-201ENST00000435914 BRCA1P38398 1863 aaKnown RBP8.44□□□□□ -1.06
PNKDP1-201ENST00000435914 NPC1L1Q9UHC9 1359 aa8.44□□□□□ -1.06
PNKDP1-201ENST00000435914 C10orf71Q711Q0 1435 aa8.44□□□□□ -1.06
PNKDP1-201ENST00000435914 PXDNLA1KZ92 1463 aa8.44□□□□□ -1.06
PNKDP1-201ENST00000435914 MMP10P09238 476 aa8.43□□□□□ -1.06
PNKDP1-201ENST00000435914 GYS1P13807 737 aa8.43□□□□□ -1.06
PNKDP1-201ENST00000435914 ADRA2BP18089 450 aa8.43□□□□□ -1.06
PNKDP1-201ENST00000435914 MTHFSP49914 203 aa8.43□□□□□ -1.06
PNKDP1-201ENST00000435914 CABP4P57796 275 aa8.43□□□□□ -1.06
PNKDP1-201ENST00000435914 TRAPPC3LQ5T215 181 aa8.43□□□□□ -1.06
PNKDP1-201ENST00000435914 NFATC2IPQ8NCF5 419 aa8.43□□□□□ -1.06
PNKDP1-201ENST00000435914 RBM42Q9BTD8 480 aaKnown RBP8.43□□□□□ -1.06
PNKDP1-201ENST00000435914 RTCBQ9Y3I0 505 aaKnown RBP8.43□□□□□ -1.06
PNKDP1-201ENST00000435914 N4BP2Q86UW6 1770 aaPredicted RBP8.43□□□□□ -1.06
PNKDP1-201ENST00000435914 AKAP4Q5JQC9 854 aa8.42□□□□□ -1.06
PNKDP1-201ENST00000435914 C1orf141Q5JVX7 400 aa8.42□□□□□ -1.06
PNKDP1-201ENST00000435914 NLGN1Q8N2Q7 840 aa8.42□□□□□ -1.06
PNKDP1-201ENST00000435914 LGR6Q9HBX8 967 aa8.42□□□□□ -1.06
PNKDP1-201ENST00000435914 ATP10DQ9P241 1426 aa8.42□□□□□ -1.06
PNKDP1-201ENST00000435914 KCPQ6ZWJ8 1503 aa8.42□□□□□ -1.06
PNKDP1-201ENST00000435914 UBR2Q8IWV8 1755 aa8.42□□□□□ -1.06
PNKDP1-201ENST00000435914 PTCD1O75127 700 aaKnown RBP8.41□□□□□ -1.06
PNKDP1-201ENST00000435914 CRKLP46109 303 aaKnown RBP8.41□□□□□ -1.06
PNKDP1-201ENST00000435914 INTS5Q6P9B9 1019 aaKnown RBP8.41□□□□□ -1.06
PNKDP1-201ENST00000435914 SLC52A2Q9HAB3 445 aa8.41□□□□□ -1.06
PNKDP1-201ENST00000435914 SIPA1L3O60292 1781 aaPredicted RBP8.4□□□□□ -1.06
PNKDP1-201ENST00000435914 USP42Q9H9J4 1324 aaKnown RBP8.4□□□□□ -1.06
PNKDP1-201ENST00000435914 RNMTO43148 476 aaKnown RBP8.4□□□□□ -1.06
PNKDP1-201ENST00000435914 HMOX1P09601 288 aa8.4□□□□□ -1.06
PNKDP1-201ENST00000435914 KCNA3P22001 575 aa8.4□□□□□ -1.06
PNKDP1-201ENST00000435914 TGFB2P61812 414 aa8.4□□□□□ -1.06
PNKDP1-201ENST00000435914 MTHFSDQ2M296 383 aaKnown RBP8.4□□□□□ -1.06
PNKDP1-201ENST00000435914 ARFGEF1Q9Y6D6 1849 aa8.4□□□□□ -1.07
PNKDP1-201ENST00000435914 DIAPH1O60610 1272 aaKnown RBP8.39□□□□□ -1.07
PNKDP1-201ENST00000435914 GIGYF1O75420 1035 aaPredicted RBP8.39□□□□□ -1.07
PNKDP1-201ENST00000435914 DDR1Q08345 913 aa8.39□□□□□ -1.07
PNKDP1-201ENST00000435914 FKBP8Q14318 412 aa8.39□□□□□ -1.07
PNKDP1-201ENST00000435914 CC2D1BQ5T0F9 858 aaKnown RBP8.39□□□□□ -1.07
PNKDP1-201ENST00000435914 DNAJC10Q8IXB1 793 aa8.39□□□□□ -1.07
PNKDP1-201ENST00000435914 SRP68Q9UHB9 627 aaKnown RBP8.39□□□□□ -1.07
PNKDP1-201ENST00000435914 WWC3Q9ULE0 1092 aa8.39□□□□□ -1.07
PNKDP1-201ENST00000435914 NRXN2Q9P2S2 1712 aa8.39□□□□□ -1.07
PNKDP1-201ENST00000435914 SOS1Q07889 1333 aaPredicted RBP8.38□□□□□ -1.07
PNKDP1-201ENST00000435914 A0A0G2JLW4 131 aa8.38□□□□□ -1.07
PNKDP1-201ENST00000435914 CYP19A1P11511 503 aaPredicted RBP8.38□□□□□ -1.07
PNKDP1-201ENST00000435914 TM4SF1P30408 202 aa8.38□□□□□ -1.07
PNKDP1-201ENST00000435914 RFC4P35249 363 aa8.38□□□□□ -1.07
PNKDP1-201ENST00000435914 SLC39A6Q13433 755 aa8.38□□□□□ -1.07
PNKDP1-201ENST00000435914 AFDNP55196 1824 aaKnown RBP8.38□□□□□ -1.07
PNKDP1-201ENST00000435914 SENP3-EIF4A1A0A087X0R7 540 aa8.37□□□□□ -1.07
PNKDP1-201ENST00000435914 POLRMTO00411 1230 aaKnown RBP8.37□□□□□ -1.07
PNKDP1-201ENST00000435914 DPEP1P16444 411 aa8.37□□□□□ -1.07
PNKDP1-201ENST00000435914 VSIG10Q8N0Z9 540 aa8.37□□□□□ -1.07
PNKDP1-201ENST00000435914 IL17REQ8NFR9 667 aa8.37□□□□□ -1.07
PNKDP1-201ENST00000435914 BCL2L12Q9HB09 334 aa8.37□□□□□ -1.07
PNKDP1-201ENST00000435914 CCDC87Q9NVE4 849 aa8.37□□□□□ -1.07
PNKDP1-201ENST00000435914 CEMIPQ8WUJ3 1361 aa8.36□□□□□ -1.07
PNKDP1-201ENST00000435914 KIF3CO14782 793 aa8.36□□□□□ -1.07
PNKDP1-201ENST00000435914 GPBP1L1Q9HC44 474 aaPredicted RBP8.36□□□□□ -1.07
PNKDP1-201ENST00000435914 ZBTB1Q9Y2K1 713 aa8.36□□□□□ -1.07
PNKDP1-201ENST00000435914 PARP3Q9Y6F1 533 aa8.36□□□□□ -1.07
PNKDP1-201ENST00000435914 COL15A1P39059 1388 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms